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TPA_inf: Rattus norvegicus Ghd12 gene for growth hormone d12

GenBank: LM644205.1

FASTA Graphics 

LOCUS       LM644205                 723 bp    mRNA    linear   ROD 28-NOV-2019
DEFINITION  TPA_inf: Rattus norvegicus Ghd12 gene for growth hormone d12.
ACCESSION   LM644205
VERSION     LM644205.1
KEYWORDS    Third Party Data; TPA; TPA:inferential.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1
  AUTHORS   Premzl,M.
  TITLE     Third party data gene data set of eutherian growth hormone genes
  JOURNAL   Genom Data 6, 166-169 (2015)
   PUBMED   26697363
  REMARK    Publication Status: Online-Only
REFERENCE   2
  AUTHORS   Premzl,M.
  TITLE     Curated eutherian third party data gene data sets
  JOURNAL   Data Brief 6, 208-213 (2015)
   PUBMED   26862561
  REMARK    Publication Status: Online-Only
REFERENCE   3
  AUTHORS   Premzl,M.
  TITLE     Eutherian third-party data gene collections
  JOURNAL   Gene Rep 16, 100414-100414 (2019)
  REMARK    DOI: 10.1016/j.genrep.2019.100414
REFERENCE   4  (bases 1 to 723)
  AUTHORS   Premzl,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-JUN-2014) Premzl M., Laboratory of Genomics, Centre
            of Animal Reproduction, 55 Heinzel St. Zagreb, 10000, CROATIA
COMMENT     The eutherian third party data gene data sets FR734011-FR734074,
            HF564658-HF564785, HF564786-HF564815, HG328835-HG329089,
            HG426065-HG426183, HG931734-HG931849 and LM644135-LM644234 were
            deposited in European Nucleotide Archive under research project
            'Comparative genomic analysis of eutherian genes'. The 812 complete
            coding sequences were curated using tests of reliability of
            eutherian public genomic sequences included in eutherian
            comparative genomic analysis protocol including gene annotations,
            phylogenetic analysis and protein molecular evolution analysis.
            Project leader: Marko Premzl PhD ; E-mail address:
            Marko.Premzl@alumni.anu.edu.au ; Internet:
            http://www.ncbi.nlm.nih.gov/myncbi/mpremzl/cv/130205/
PRIMARY     TPA_SPAN            PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-28                TI103823261        236-263
            29-207              TI924801889        84-262
            208-246             TI934445283        399-437
            247-354             TI1708027768       483-590             c
            355-534             TI1664699226       257-436             c
            535-723             TI133373195        239-427             c
FEATURES             Location/Qualifiers
     source          1..723
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
     gene            1..723
                     /gene="Ghd12"
     CDS             1..723
                     /gene="Ghd12"
                     /codon_start=1
                     /product="growth hormone d12"
                     /protein_id="CDW51452.1"
                     /db_xref="GOA:Q4QRA1"
                     /db_xref="InterPro:IPR001400"
                     /db_xref="InterPro:IPR009079"
                     /db_xref="UniProtKB/TrEMBL:Q4QRA1"
                     /translation="MLPLSQPRFSGALLMLVISNLLLWEKTASVPACHLEEGGCWDPL
                     VNTFNSAIQRAEVIQNLAEQIHEEFYHNPFSSAQFVTLVARMYRHDQAVYRARYHCPS
                     NSTNPPLHGPEHENIKTKKYLKMMINFVGSWISPLFHLVLELRGMQNVPEVILSKAKD
                     IEENNREILEDLRWILTKVYPTAKMKEKIISWDYLSSIKSNEKSEKFLAIFNISHCLR
                     VDIFYTKFHLRALMCRITGKEC"
ORIGIN      
        1 atgctgccat tgagtcaacc tcgtttttca ggggcactct tgatgctggt gatatcaaac
       61 ttgcttctgt gggagaaaac tgcatcagtt cctgcttgtc acctggaaga agggggttgc
      121 tgggatcccc ttgtgaacac atttaacagt gccatccagc gagctgaagt catccagaat
      181 cttgctgagc aaatacatga agagttttac cacaatccat tctcatctgc acaatttgta
      241 acactggttg cacgcatgta taggcatgat caggctgttt acagagccag atatcactgc
      301 ccttctaaca gcacaaaccc accacttcat ggacctgaac atgaaaacat caaaactaaa
      361 aagtatttaa aaatgatgat caattttgtg ggttcctgga tcagcccttt attccatcta
      421 gtgcttgaac tgagaggcat gcaaaatgtt cctgaagtca tcctctcaaa agctaaggat
      481 atagaagaaa acaacagaga aattctggag gaccttaggt ggatactcac caaggtctat
      541 cctacagcaa agatgaagga aaaaattatc agctgggact atctttcatc cataaaatca
      601 aatgaaaaaa gtgaaaaatt tttggcaatt tttaacattt ctcactgcct acgtgttgat
      661 atattctaca ctaaatttca tctgagagca ttgatgtgtc gcataacagg gaaagaatgc
      721 taa
//
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