LOCUS BC107947 1130 bp mRNA linear ROD 09-JUN-2008
DEFINITION Rattus norvegicus JTV1 gene, mRNA (cDNA clone MGC:125271
IMAGE:7386574), complete cds.
ACCESSION BC107947
VERSION BC107947.1
KEYWORDS MGC.
SOURCE Rattus norvegicus (Norway rat)
ORGANISM Rattus norvegicus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Rattus.
REFERENCE 1 (bases 1 to 1130)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1130)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-OCT-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Drs. Josef Lazar & Howard Jacob, Medical
College of Wisconsin
cDNA Library Preparation: Open Biosystems
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 244 Row: j Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 82654217.
FEATURES Location/Qualifiers
source 1..1130
/organism="Rattus norvegicus"
/mol_type="mRNA"
/db_xref="taxon:10116"
/clone="MGC:125271 IMAGE:7386574"
/tissue_type="Thymus, rat"
/clone_lib="NIH_MGC_251"
/lab_host="DH10B"
/note="Vector: pExpress1"
gene 1..1130
/gene="Jtv1"
/db_xref="GeneID:288480"
/db_xref="RGD:1560787"
CDS 38..1000
/gene="Jtv1"
/codon_start=1
/product="JTV1 gene"
/protein_id="AAI07948.1"
/db_xref="GeneID:288480"
/db_xref="RGD:1560787"
/translation="MPMYQVKPYHGGSAPLRVELPTCMYRLPNVHSKTTSPATDAGHV
QEPSEPSLRALESRQDDILKRLYELKAAVDGLSKMIHTPDADLDVTNILQADEPTTLT
TNALDLNSVLGKDYGALKDIVINANPASPPLSLLVLHRLLCERYRVLSTVHTHSSVKN
VPENLLKCFGEQARKQSRHEYQLGFTLIWKNVPKTQMKFSVQTMCPIEGEGNIARFLF
SLFGQKHNAVHLTLIDSWVDIAMFQLREGSSKEKAAVFRSMNSALGKSPWLVGNELTV
ADVVLWSVLQQTGGSSGAAPTNVQRWLKSCENLAPFSTALQLLK"
ORIGIN
1 cccgtccctc gcccgctacc ttcctttggt tcccaccatg ccgatgtacc aggtaaagcc
61 ctatcatgga ggcagcgcac ctctgcgtgt agagcttcca acctgcatgt accggctccc
121 caacgtgcac agcaagacca ccagccccgc gaccgacgcg ggccacgtgc aggagccatc
181 tgagccatct ttgcgagccc tcgagtctcg gcaggatgat attttaaagc gtttgtatga
241 gttgaaggca gcagtcgacg gcctttcaaa gatgattcac accccagatg ccgacttgga
301 cgtcaccaac atcctgcaag ccgacgagcc cacgacttta actacaaatg cattggactt
361 gaactccgtg cttggaaagg attatggggc gctgaaagat atcgtgatca acgcaaaccc
421 agcctccccg ccactgtccc tgcttgtgct acatagacta ctctgtgaac gctacagggt
481 cctgtccaca gtacacacac attcgtccgt caagaatgta cctgagaatc ttctcaagtg
541 cttcggggag caggctagaa aacagtcccg ccacgagtat cagctgggct tcactctgat
601 ttggaagaac gtgcccaaga cacagatgaa gttcagtgta caaacgatgt gccccattga
661 aggagaaggg aacatcgcac gcttcctgtt ctctctattt ggtcagaagc ataacgctgt
721 ccacctaacc ctcatcgaca gctgggtgga tatcgccatg tttcagctga gagaagggag
781 cagtaaggaa aaagcggctg ttttccgctc tatgaactcc gctttgggga aaagcccgtg
841 gttggttggg aatgagctca ctgtggcaga tgtggtgctg tggtccgtgc tccagcagac
901 tgggggaagc agtggggcag cgcccaccaa tgtgcagcgg tggcttaagt cctgtgagaa
961 cctggccccc ttcagcactg ccctccagct ccttaagtga attcgagcag cttgtcttgc
1021 aggcaggatt caacataatg gtctgttgtc agaaagggac ttgtccaatt gtcaggcatc
1081 aataaaagca ccatatgatc taaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//