LOCUS BY764681 699 bp mRNA linear EST 17-DEC-2002
DEFINITION BY764681 RIKEN full-length enriched, activated spleen Mus musculus
cDNA clone F830002F10 3', mRNA sequence.
ACCESSION BY764681
VERSION BY764681.1
DBLINK BioSample: SAMN00171903
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 699)
AUTHORS Okazaki,Y., Furuno,M., Kasukawa,T., Adachi,J., Bono,H., Kondo,S.,
Nikaido,I., Osato,N., Saito,R., Suzuki,H., Yamanaka,I.,
Kiyosawa,H., Yagi,K., Tomaru,Y., Hasegawa,Y., Nogami,A.,
Schonbach,C., Gojobori,T., Baldarelli,R., Hill,D.P., Bult,C.,
Hume,D.A., Quackenbush,J., Schriml,L.M., Kanapin,A., Matsuda,H.,
Batalov,S., Beisel,K.W., Blake,J.A., Bradt,D., Brusic,V.,
Chothia,C., Corbani,L.E., Cousins,S., Dalla,E., Dragani,T.A.,
Fletcher,C.F., Forrest,A., Frazer,K.S., Gaasterland,T.,
Gariboldi,M., Gissi,C., Godzik,A., Gough,J., Grimmond,S.,
Gustincich,S., Hirokawa,N., Jackson,I.J., Jarvis,E.D., Kanai,A.,
Kawaji,H., Kawasawa,Y., Kedzierski,R.M., King,B.L., Konagaya,A.,
Kurochkin,I.V., Lee,Y., Lenhard,B., Lyons,P.A., Maglott,D.R.,
Maltais,L., Marchionni,L., McKenzie,L., Miki,H., Nagashima,T.,
Numata,K., Okido,T., Pavan,W.J., Pertea,G., Pesole,G.,
Petrovsky,N., Pillai,R., Pontius,J.U., Qi,D., Ramachandran,S.,
Ravasi,T., Reed,J.C., Reed,D.J., Reid,J., Ring,B.Z., Ringwald,M.,
Sandelin,A., Schneider,C., Semple,C.A., Setou,M., Shimada,K.,
Sultana,R., Takenaka,Y., Taylor,M.S., Teasdale,R.D., Tomita,M.,
Verardo,R., Wagner,L., Wahlestedt,C., Wang,Y., Watanabe,Y.,
Wells,C., Wilming,L.G., Wynshaw-Boris,A., Yanagisawa,M., Yang,I.,
Yang,L., Yuan,Z., Zavolan,M., Zhu,Y., Zimmer,A., Carninci,P.,
Hayatsu,N., Hirozane-Kishikawa,T., Konno,H., Nakamura,M.,
Sakazume,N., Sato,K., Shiraki,T., Waki,K., Kawai,J., Aizawa,K.,
Arakawa,T., Fukuda,S., Hara,A., Hashizume,W., Imotani,K., Ishii,Y.,
Itoh,M., Kagawa,I., Miyazaki,A., Sakai,K., Sasaki,D., Shibata,K.,
Shinagawa,A., Yasunishi,A., Yoshino,M., Waterston,R., Lander,E.S.,
Rogers,J., Birney,E. and Hayashizaki,Y.
TITLE Analysis of the mouse transcriptome based on functional annotation
of 60,770 full-length cDNAs
JOURNAL Nature 420, 563-573 (2002)
PUBMED 12466851
COMMENT Contact: Yoshihide Hayashizaki
Omics Science Center, RIKEN Yokohama Institute
The Institute of Physical and Chemical Research (RIKEN)
1-7-22 Suehiro-cho, Tsurumi-ku, Yokohama, Kanagawa 230-0045, Japan
Email: URL:http://www.osc.riken.jp/
Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P.,
Fukuda,S., Hashizume,W., Hayashida,K., Hirozane,T., Hori,F.,
Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kawai,J., Kojima,Y.,
Kondo,S., Konno,H., Koya,S., Miyazaki,A., Murata,M., Nakamura,M.,
Nomura,K., Numazaki,R., Ohno,M., Ohsato,N., Saito,R., Sakazume,N.,
Sano,H., Sasaki,D., Sato,K., Shibata,K., Shiraki,T., Tagami,M.,
Takeda,Y., Waki,K., Watahiki,A., Muramatsu,M. and Hayashizaki,Y.
Direct Submission
Computational Analysis of Full-Length Mouse cDNAs Compared with
Human Genome Sequences Mamm. Genome. 12, 673-677 (2001)
Normalization and subtraction of cap-trapper-selected cDNAs to
prepare full-length cDNA libraries for rapid discovery of new
genes. Genome Res. 10 (10), 1617-1630 (2000)
RIKEN integrated sequence analysis (RISA) system--384-format
sequencing pipeline with 384 multicapillary sequencer. Genome Res.
10 (11), 1757-1771 (2000)
Computer-based methods for the mouse full-length cDNA
encyclopedia: real-time sequence clustering for construction of a
nonredundant cDNA library. Genome Res. 11 (2), 281-289 (2001)
cDNA library was prepared and sequenced in Mouse Genome
Encyclopedia Project of Genome Exploration Research Group in Riken
Genomic Sciences Center and Genome Science Laboratory in RIKEN.
Division of Experimental Animal Research in Riken contributed to
prepare mouse tissues.
Tissues were provided by Dr. John Todd (Dept. of Medical Genetics
Wellcome Trust Centre for Molecular Mechanisms in Disease Wellcome
Trust/MRC building Addenbrookes Hospital Cambridge) whose
assistance we gratefully acknowledge.
Please visit our web site (http://genome.gsc.riken.go.jp) for
further details.
FEATURES Location/Qualifiers
source 1..699
/organism="Mus musculus"
/mol_type="mRNA"
/strain="NOD"
/db_xref="taxon:10090"
/clone="F830002F10"
/tissue_type="activated spleen"
/clone_lib="SAMN00171903 RIKEN full-length enriched,
activated spleen"
ORIGIN
1 cgttcaggac agtgactacn atgtggtaaa tactccanaa tatcagtaga cttgttacaa
61 aatttattca ttgctggtga ctgctatagc atagtggccc acactgagtc tctcaaagta
121 gcagtgtgtt attatctcac aattctgaag tcacaaagtt ggcagagcct cccttgctgg
181 attctagatt ctgatccttt gcagatacag ctggcgtttt ctttggaagc ctgtggaagc
241 atcactgtca tcccatcctt atcttgactg ggtgttctcc ttgggttcct gtcttaacgt
301 ggtcatctta tgaggtgagc agttatactg gactaggagt cgattttgct ccaggatgac
361 ttcagtgtag atctgacatc aatctatttc ctaagaaggc cacattctga gatactggtg
421 ttatattcag cactttgata caattaaacc tagagttatg tcccatatct atactaacct
481 ttgtttctgc tagttctcca agctgaggtt gttttctttc tacatatcct gtgatccctg
541 cccacctact gtcttagata ttgagctgct ttccatcctt atgcctctct ccattcttct
601 gtcaccgttg gggattcctt attgatgtct tccttccttc tcacctctgc acatgcgcta
661 agagaaactt tctcccgaac catctaggtt taccttctg
//