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NCBI Reference Sequence: XM_574098.7
FASTA Graphics
LOCUS XM_574098 1633 bp mRNA linear ROD 22-FEB-2024 DEFINITION PREDICTED: Rattus norvegicus mature T-cell proliferation 1 (Mtcp1), transcript variant X2, mRNA. ACCESSION XM_574098 VERSION XM_574098.7 DBLINK BioProject: PRJNA1074393 KEYWORDS RefSeq. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_086036) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Feb 22, 2024 this sequence version replaced XM_574098.6. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_036323735.1-RS_2024_02 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.2 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 02/09/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1633 /organism="Rattus norvegicus" /mol_type="mRNA" /strain="BN/NHsdMcwi" /bio_material="RGD 61498" /db_xref="taxon:10116" /chromosome="18" /sex="male" /tissue_type="kidney, spleen, liver" /geo_loc_name="USA: Wisconsin, Milwaukee" /lat_lon="43.05 N 88.04 W" /collected_by="Rebecca Schilling, Melinda Dwinell" gene 1..1633 /gene="Mtcp1" /note="mature T-cell proliferation 1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 5 Proteins" /db_xref="GeneID:498814" /db_xref="RGD:1561352" CDS 295..618 /gene="Mtcp1" /codon_start=1 /product="protein p13 MTCP-1" /protein_id="XP_574098.2" /db_xref="GeneID:498814" /db_xref="RGD:1561352" /translation="MAREDTGAPPTRLWVHCEGVYRDEHQRTWVAAAEEDTATLKARV RRVPVPLGDASKPRDLLTSPLPLMWQLYPEGRYMDNKSRLWQIRRHSVVRGAQELLLQ LLPET" polyA_site 1633 /gene="Mtcp1" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cagagggagt gtagctcagt ggtcggccat ggacagcaga gcaccccgcg ctgtctgccc 61 cctcgcctac cccagtttcg tttcccgaca ccgtaagctg tcacgtgatg cgcccaggtc 121 acgcgatcga tgcgcgtgag gcttgattcc gccgcgcggt cgcccatccc gggtcgtgtg 181 actcaatagg gagttcatcc tgacgtctcc cagtcacccc cgtgtcccgc gcgcgcggat 241 gctgcaggct cgggtgcagg agagcagggc ccggactcga acccccagcc cgggatggcc 301 cgagaggaca cgggggcccc gcccacccga ctctgggttc actgtgaggg tgtctaccgc 361 gacgagcacc agcgcacgtg ggtcgctgct gcagaagagg acacagccac cctaaaggct 421 cgggtccggc gagttccagt tcctctgggt gacgcttcga agccccgtga cctcctgacc 481 tcaccgctgc ctctcatgtg gcagctctac cccgaggggc ggtacatgga caacaagtcc 541 cgcctctggc agatccggcg tcattcagtg gtcagggggg cgcaggagct gctcctacaa 601 cttctgccag aaacctgacc cgctacacgg tttcacttcc gcttcctgga acacgcgcga 661 ttgtacttcc gcttcaagct gccgcccacc ctgggcctcc gggatggggg gaagggtggg 721 gggaggaggg caagagcgga gcttcgaggg aagggctgtg gagagcgcgg cgtcatcatc 781 accgggacag gttagcgcca tgcgagggca ggggcagagt cagggcccgg aagtgacgcc 841 tttgggagca gccaccaaac cctcaatgga cgccgatggc ccaactcgca gcacctggga 901 cccggtcgtg attgacatgg aagagagcgg catctgcagg gcccacgcgg gtttcccact 961 cctggcgccg agcgctcaag ggattctggg agggaaagac gagtcgcacc tctgattggc 1021 acctctcttt gattgacacc tctctcgtga ggccgtagcc accaacgttg ctgatcactg 1081 ggcaccgtcc gtgggaactg tgaggaattt cgggggtgaa aacatgcaca gcggttcatt 1141 cacatcgaag tcgggttttg ctttttggga taagtgtggg gcccagagca atggtgcgga 1201 cctgaaattc cagctgtgtg ggagaccatt gtgtgcactt tgtatgttgt gtgcactttg 1261 tatgttgtgt gtactttgta tgttgtgtgt actttgtatg ttgtgtgcta tttgactaca 1321 ctgaattttt ccatgaacgt ttacatcctc cgcattaatg atccatgtaa tccgtctgtc 1381 caattggtga ggaaagagta tttttagcgt gttcattttc ccagatgttg tgaggttaaa 1441 ggtcattaca tgagccccag aaggaaatcc tgtgtgcaca ggctgcagag tctttacaac 1501 tgaaactaaa aacaaaaggt gtatacataa tgtgtattat tatgttacac atgtatactt 1561 ttttcatata tatatatttt tttgttgttg ttttagtctc ttggacatgc cgcggaagga 1621 tccgtgccag aaa //
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