LOCUS AY069227 1783 bp mRNA linear INV 17-DEC-2001
DEFINITION Drosophila melanogaster GH27315 full length cDNA.
ACCESSION AY069227
VERSION AY069227.1
KEYWORDS FLI_CDNA.
SOURCE Drosophila melanogaster (fruit fly)
ORGANISM Drosophila melanogaster
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
REFERENCE 1 (bases 1 to 1783)
AUTHORS Stapleton,M., Brokstein,P., Hong,L., Agbayani,A., Carlson,J.,
Champe,M., Chavez,C., Dorsett,V., Farfan,D., Frise,E., George,R.,
Gonzalez,M., Guarin,H., Li,P., Liao,G., Miranda,A., Mungall,C.J.,
Nunoo,J., Pacleb,J., Paragas,V., Park,S., Phouanenavong,S., Wan,K.,
Yu,C., Lewis,S.E., Rubin,G.M. and Celniker,S.
TITLE Direct Submission
JOURNAL Submitted (10-DEC-2001) Berkeley Drosophila Genome Project,
Lawrence Berkeley National Laboratory, One Cyclotron Road,
Berkeley, CA 94720, USA
COMMENT Sequence submitted by:
Berkeley Drosophila Genome Project
Lawrence Berkeley National Laboratory
Berkeley, CA 94720
This clone was sequenced as part of a high-throughput process to
sequence clones from Drosophila Gene Collection 1 (Rubin et al.,
Science 2000). The sequence has been subjected to integrity checks
for sequence accuracy, presence of a polyA tail and contiguity
within 100 kb in the genome. Thus we believe the sequence to
reflect accurately this particular cDNA clone. However, there are
artifacts associated with the generation of cDNA clones that may
have not been detected in our initial analyses such as internal
priming, priming from contaminating genomic DNA, retained introns
due to reverse transcription of unspliced precursor RNAs, and
reverse transcriptase errors that result in single base changes.
For further information about this sequence, including its location
and relationship to other sequences, please visit our Web site
(http://fruitfly.berkeley.edu) or send email to
cdna@fruitfly.berkeley.edu.
FEATURES Location/Qualifiers
source 1..1783
/organism="Drosophila melanogaster"
/mol_type="mRNA"
/strain="y; cn bw sp"
/db_xref="taxon:7227"
/map="6A4-6B1"
gene 1..1783
/gene="Spat"
/note="alignment with genomic scaffold AE003437"
/db_xref="FLYBASE:FBgn0014031"
CDS 603..1466
/gene="Spat"
/note="Longest ORF"
/codon_start=1
/product="GH27315p"
/protein_id="AAL39372.1"
/db_xref="FLYBASE:FBgn0014031"
/translation="MDEVKEGIKYIFQTLNDATMCISGAGHSGMEAALCNLIEDGDVV
LMGITGVWGHRAGDMARRYGAEVHYVEASFGRALSHEEITFAFEAHRPKVFFIAQGDS
STGIIQQNIRELGELCRKYDCFLIVDTVASLGGTEFLMDEWKVDVAYTGSQKSLGGPA
GLTPISFSKRALTRIRKRKTKPKVYYFDILLIGQYWGCYGTPRIYHHTISSTLLYGLR
EALAHFCAVGLKAVVRRHQECSKRLQLGIEELGLEMFVSREEERLPTVNTIKVPFGVD
WKKVAEYAMRK"
ORIGIN
1 ccaccgagag agacagccca taaaaaccaa ctcccatcac caaacagtag taacacccat
61 tctacctggc acagcggatt agagagcaga aggcgataag gcagtcgtaa acacagagat
121 ctgattacgt aaatagggaa caaagaccat ggaggtacca ccgccacttg tactcaagcg
181 accgctctat gtgcccagca agacgttgat ggggcccgga ccctccaact gttcccatcg
241 cgtcctggag gccatgagca atccggtgtt gggtcacatg catcccgaat gcctgcaggt
301 acaatatctt cttaaaacca caaaagtgct agcaagattg agcttaatac tcgaattata
361 tcgaaaagtt aagcccaagt ccatatactc atgggccgca ctgtacctta tctgaacgaa
421 gtgaaacatt gagatacatt tgctgagctg ggtcagagat ctgtgggcta gccagtcgag
481 tgaaaccagc acatctctta tactttatag caatctaata ttagtgatcc ccccatgaat
541 tgagctattc ccactgagca tggccaggtg tttgtatatt aatctctgta tatctgcaga
601 tcatggacga ggtgaaggag ggcattaagt acatctttca gacactcaac gatgccacca
661 tgtgcatcag cggcgccggc cactcgggca tggaggccgc tctgtgcaat ctgatcgagg
721 atggcgatgt ggtgctcatg ggcatcacgg gcgtctgggg tcatcgggcc ggggatatgg
781 cccgtcgcta tggtgccgaa gttcactacg tggaggcgag tttcggccgg gcactgtcgc
841 acgaagagat cacattcgcc ttcgaggcgc atcgacccaa ggtcttcttc attgcccagg
901 gtgactcctc gactggcatt atccagcaga atatccgtga gctgggcgaa ctgtgccgca
961 agtacgattg cttcctcatc gtcgatacgg tggcttcgct cggcggcacc gaattcctca
1021 tggacgagtg gaaggtggat gtggcgtaca cgggttcgca gaaatcgctc ggtggtcccg
1081 ccggtctaac gcccatttcg ttcagcaagc gtgctttgac ccgcatccga aagcgaaaga
1141 ccaagccgaa ggtttactac ttcgatatcc tgctgattgg tcagtactgg ggttgctatg
1201 gcacaccccg catctaccac cacaccatat cctccaccct gctctacgga ttgcgtgagg
1261 cactggccca cttttgtgcc gtcggcctca aggcggtggt gcgtcgccat caggagtgct
1321 ccaagcgact gcagttgggc atcgaggagc tgggtcttga gatgtttgtg tcgcgcgagg
1381 aggagcgttt gcccacggtg aacacgatta aggtgccctt cggcgtcgac tggaaaaagg
1441 tggccgagta cgccatgcgc aagtgagtat tgtacaactg gacgcgaatc ctcgatagag
1501 atccgtattg aatcctttct ttttttccag gtacagcgtt gagattagcg gtggtctggg
1561 tcccacggtg gagcacgtct tccgtatcgg tttaatgggc gaaaacgcta ccgtggagcg
1621 cgtggacatg gtgctcagca tcctgaacga ggccattcag agcagcaagc tggggatcaa
1681 gacggatcta tcgaaaatct aacaaatcgt tgccctgctc ctatcactag ttataaaata
1741 aaaacaaata tggaaaacta aaaaaaaaaa aaaaaaaaaa aaa
//