LOCUS BC028857 2222 bp mRNA linear ROD 15-JUL-2006
DEFINITION Mus musculus ubiquilin 1, mRNA (cDNA clone MGC:30288
IMAGE:4507759), complete cds.
ACCESSION BC028857
VERSION BC028857.1
KEYWORDS MGC.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 2222)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2222)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: The Cepko Laboratory
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 41 Row: i Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 22726190.
FEATURES Location/Qualifiers
source 1..2222
/organism="Mus musculus"
/mol_type="mRNA"
/db_xref="taxon:10090"
/clone="MGC:30288 IMAGE:4507759"
/tissue_type="Eye, retina, mouse strain C57Bl\6"
/clone_lib="NIH_MGC_94"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2222
/gene="Ubqln1"
/gene_synonym="DA41"
/gene_synonym="Dsk2"
/gene_synonym="Plic-1"
/gene_synonym="XDRP1"
/db_xref="GeneID:56085"
/db_xref="MGI:MGI:1860276"
CDS 157..1821
/gene="Ubqln1"
/gene_synonym="DA41"
/gene_synonym="Dsk2"
/gene_synonym="Plic-1"
/gene_synonym="XDRP1"
/codon_start=1
/product="ubiquilin 1"
/protein_id="AAH28857.1"
/db_xref="GeneID:56085"
/db_xref="MGI:MGI:1860276"
/translation="MAESAESGGPPGAQDSAADGGPAEPKIMKVTVKTPKEKEEFAVP
ENSSVQQFKEEISKRFKSHIDQLVLIFAGKILKDQDTLSQHGIHDGLTVHLVIKTQNR
PQDNSAQQTNAPGSTVTSSPAPDSNPTSGSAANSSFGVGGLGGLAGLSSLGLNTTNFS
ELQSQMQRQLLSNPEMMVQIMENPFVQSMLSNPDLMRQLIMANPQMQQLIQRNPEISH
MLNNPDIMRQTLELARNPAMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMLN
AAQEQFGGNPFASLVSSSSSAEGTQPSRTENRDPLPNPWAPQTSQSSPASGTTGSTTN
TMSTSGGTATSTPAGQSTSGPSLVPGAGASMFNTPGMQSLLQQITENPQLMQNMLSAP
YMRSMLQSLSQNPDLAAQMQNPDTLSAMSNPRAMQALLQIQQGLQTLATEAPGLIPGF
TPGLAAGNSGGSSGTNAPSTAPSEDTNPQGGTAEPGHQQFIQQMLQALAGVNPQLQSP
EVRFQQQLEQLSAMGFLNREANLQALIATGGDINAAIERLLGSQPS"
ORIGIN
1 cgacgcggag agtccccgcg tccacacggc agccgatcgc ccacccgggg cctgcacccg
61 cagcccgcgt ccacgcaccc tcggcggccc cgcagcctgt cacgcctcgc ggacccggcc
121 gcagcccgca gtgtcgcgct cgcctgagtc accgccatgg ccgagagcgc agagagcggc
181 ggcccaccgg gcgcgcagga cagtgcggcc gacggcggcc ccgcagagcc caagatcatg
241 aaggtcacgg tgaagacgcc taaagagaag gaggagtttg ccgtgcccga gaacagctcg
301 gtccagcagt tcaaagagga aatctctaaa cgtttcaaat ctcatattga ccaacttgtg
361 ttgatatttg ctggaaaaat tttaaaagat caagatactc tgagtcagca tgggattcat
421 gatggactta cggttcacct tgtcatcaaa acacagaaca ggccgcaaga taattcagct
481 cagcaaacaa atgcccctgg aagcactgtg accagctcac cagctcccga tagcaacccc
541 acgtctggtt ctgctgctaa cagctccttt ggcgtaggcg gacttggagg acttgcaggt
601 cttagcagct tgggtttaaa caccaccaac ttctctgaac tccagagcca aatgcagcgg
661 caacttttgt ctaaccctga aatgatggtc cagatcatgg aaaatccctt tgtccagagc
721 atgctctcaa atcctgacct gatgcggcaa ttgattatgg ccaatccaca gatgcaacag
781 ttgatacaga gaaatccaga gattagtcat atgcttaata atccagatat aatgagacaa
841 acactggaac ttgcgagaaa tccagcgatg atgcaggaaa tgatgagaaa ccaggaccga
901 gccttgagca acctagaaag tattcctggg ggctataatg ccttacggcg catgtacacc
961 gatatccagg agcctatgct gaatgctgct caagaacagt ttggtggtaa tccatttgcg
1021 tccttagtga gcagttcgtc ctcagcagaa gggactcagc cttctcgaac agaaaatagg
1081 gatccgctcc ccaacccgtg ggctccgcag acttcccaga gctcaccagc ctccggtacc
1141 actggcagca ccactaacac catgagcacc tctggtggca ctgccaccag tacccctgct
1201 ggacagagca cctcgggccc aagcttggtg cctggcgcag gagctagtat gttcaacacc
1261 cccggaatgc agagcctgct gcagcagata actgagaacc cacagctcat gcagaacatg
1321 ctgtccgccc catacatgag gagcatgctg cagtccctga gccagaaccc cgaccttgct
1381 gcgcagatgc agaaccccga cacgctctca gcgatgtcga atcctagagc catgcaggcg
1441 ctgctgcaga tccagcaggg cttgcagacg ctggccacag aagctcctgg cctcatccca
1501 gggtttactc ctggcttggc agcaggcaat tctggaggct cttccggaac caatgcacct
1561 agcactgcac ctagtgaaga tacgaacccc caagggggca ctgctgagcc aggccaccag
1621 cagtttatcc agcagatgct gcaggccctt gcgggggtga atcctcagct gcagagtcca
1681 gaagtcagat ttcagcaaca actggaacaa ctcagtgcca tgggattctt gaaccgtgaa
1741 gcaaacctgc aagctctgat agccacaggg ggcgacatca atgcagcaat cgaaaggttg
1801 ctgggctccc agccgtcata gcagcatctc tctatcctga gaaaatgtaa tttatttttg
1861 ataacggctc ttaaatcttt aaaataacat gctttatttc attgggattc tgtgctgtta
1921 taaaggaaac caataggaag tatctggagg cagagtgcag tacgacgggc gggtttctgt
1981 gtctttttgg aacagtggga atcaatgttt cttctggtta aggctgctgc atgcatcaaa
2041 cacttggcat ttattgtaat ttttaaaaaa atatcacctt ttctaattgg gtgaacaaat
2101 ttttgtcctg catctgtcca actaacttgc tttttaaaca taaccctatg gtagtaattt
2161 atgtagaata aaggcattaa aaagcaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2221 aa
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