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Mus musculus ubiquilin 1, mRNA (cDNA clone MGC:30288 IMAGE:4507759), complete cds

GenBank: BC028857.1

FASTA Graphics 

LOCUS       BC028857                2222 bp    mRNA    linear   ROD 15-JUL-2006
DEFINITION  Mus musculus ubiquilin 1, mRNA (cDNA clone MGC:30288
            IMAGE:4507759), complete cds.
ACCESSION   BC028857
VERSION     BC028857.1
KEYWORDS    MGC.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2222)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 2222)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (01-MAY-2002) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: The Cepko Laboratory
            cDNA Library Preparation: Life Technologies, Inc.
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Baylor College of Medicine Human Genome
            Sequencing Center
            Center code: BCM-HGSC
            Web site: http://www.hgsc.bcm.tmc.edu/cdna/
            Contact: amg@bcm.tmc.edu
            Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
            Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
            A.N., Gibbs, R.A.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 41 Row: i Column: 24
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 22726190.
FEATURES             Location/Qualifiers
     source          1..2222
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10090"
                     /clone="MGC:30288 IMAGE:4507759"
                     /tissue_type="Eye, retina, mouse strain C57Bl\6"
                     /clone_lib="NIH_MGC_94"
                     /lab_host="DH10B"
                     /note="Vector: pCMV-SPORT6"
     gene            1..2222
                     /gene="Ubqln1"
                     /gene_synonym="DA41"
                     /gene_synonym="Dsk2"
                     /gene_synonym="Plic-1"
                     /gene_synonym="XDRP1"
                     /db_xref="GeneID:56085"
                     /db_xref="MGI:MGI:1860276"
     CDS             157..1821
                     /gene="Ubqln1"
                     /gene_synonym="DA41"
                     /gene_synonym="Dsk2"
                     /gene_synonym="Plic-1"
                     /gene_synonym="XDRP1"
                     /codon_start=1
                     /product="ubiquilin 1"
                     /protein_id="AAH28857.1"
                     /db_xref="GeneID:56085"
                     /db_xref="MGI:MGI:1860276"
                     /translation="MAESAESGGPPGAQDSAADGGPAEPKIMKVTVKTPKEKEEFAVP
                     ENSSVQQFKEEISKRFKSHIDQLVLIFAGKILKDQDTLSQHGIHDGLTVHLVIKTQNR
                     PQDNSAQQTNAPGSTVTSSPAPDSNPTSGSAANSSFGVGGLGGLAGLSSLGLNTTNFS
                     ELQSQMQRQLLSNPEMMVQIMENPFVQSMLSNPDLMRQLIMANPQMQQLIQRNPEISH
                     MLNNPDIMRQTLELARNPAMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMLN
                     AAQEQFGGNPFASLVSSSSSAEGTQPSRTENRDPLPNPWAPQTSQSSPASGTTGSTTN
                     TMSTSGGTATSTPAGQSTSGPSLVPGAGASMFNTPGMQSLLQQITENPQLMQNMLSAP
                     YMRSMLQSLSQNPDLAAQMQNPDTLSAMSNPRAMQALLQIQQGLQTLATEAPGLIPGF
                     TPGLAAGNSGGSSGTNAPSTAPSEDTNPQGGTAEPGHQQFIQQMLQALAGVNPQLQSP
                     EVRFQQQLEQLSAMGFLNREANLQALIATGGDINAAIERLLGSQPS"
ORIGIN      
        1 cgacgcggag agtccccgcg tccacacggc agccgatcgc ccacccgggg cctgcacccg
       61 cagcccgcgt ccacgcaccc tcggcggccc cgcagcctgt cacgcctcgc ggacccggcc
      121 gcagcccgca gtgtcgcgct cgcctgagtc accgccatgg ccgagagcgc agagagcggc
      181 ggcccaccgg gcgcgcagga cagtgcggcc gacggcggcc ccgcagagcc caagatcatg
      241 aaggtcacgg tgaagacgcc taaagagaag gaggagtttg ccgtgcccga gaacagctcg
      301 gtccagcagt tcaaagagga aatctctaaa cgtttcaaat ctcatattga ccaacttgtg
      361 ttgatatttg ctggaaaaat tttaaaagat caagatactc tgagtcagca tgggattcat
      421 gatggactta cggttcacct tgtcatcaaa acacagaaca ggccgcaaga taattcagct
      481 cagcaaacaa atgcccctgg aagcactgtg accagctcac cagctcccga tagcaacccc
      541 acgtctggtt ctgctgctaa cagctccttt ggcgtaggcg gacttggagg acttgcaggt
      601 cttagcagct tgggtttaaa caccaccaac ttctctgaac tccagagcca aatgcagcgg
      661 caacttttgt ctaaccctga aatgatggtc cagatcatgg aaaatccctt tgtccagagc
      721 atgctctcaa atcctgacct gatgcggcaa ttgattatgg ccaatccaca gatgcaacag
      781 ttgatacaga gaaatccaga gattagtcat atgcttaata atccagatat aatgagacaa
      841 acactggaac ttgcgagaaa tccagcgatg atgcaggaaa tgatgagaaa ccaggaccga
      901 gccttgagca acctagaaag tattcctggg ggctataatg ccttacggcg catgtacacc
      961 gatatccagg agcctatgct gaatgctgct caagaacagt ttggtggtaa tccatttgcg
     1021 tccttagtga gcagttcgtc ctcagcagaa gggactcagc cttctcgaac agaaaatagg
     1081 gatccgctcc ccaacccgtg ggctccgcag acttcccaga gctcaccagc ctccggtacc
     1141 actggcagca ccactaacac catgagcacc tctggtggca ctgccaccag tacccctgct
     1201 ggacagagca cctcgggccc aagcttggtg cctggcgcag gagctagtat gttcaacacc
     1261 cccggaatgc agagcctgct gcagcagata actgagaacc cacagctcat gcagaacatg
     1321 ctgtccgccc catacatgag gagcatgctg cagtccctga gccagaaccc cgaccttgct
     1381 gcgcagatgc agaaccccga cacgctctca gcgatgtcga atcctagagc catgcaggcg
     1441 ctgctgcaga tccagcaggg cttgcagacg ctggccacag aagctcctgg cctcatccca
     1501 gggtttactc ctggcttggc agcaggcaat tctggaggct cttccggaac caatgcacct
     1561 agcactgcac ctagtgaaga tacgaacccc caagggggca ctgctgagcc aggccaccag
     1621 cagtttatcc agcagatgct gcaggccctt gcgggggtga atcctcagct gcagagtcca
     1681 gaagtcagat ttcagcaaca actggaacaa ctcagtgcca tgggattctt gaaccgtgaa
     1741 gcaaacctgc aagctctgat agccacaggg ggcgacatca atgcagcaat cgaaaggttg
     1801 ctgggctccc agccgtcata gcagcatctc tctatcctga gaaaatgtaa tttatttttg
     1861 ataacggctc ttaaatcttt aaaataacat gctttatttc attgggattc tgtgctgtta
     1921 taaaggaaac caataggaag tatctggagg cagagtgcag tacgacgggc gggtttctgt
     1981 gtctttttgg aacagtggga atcaatgttt cttctggtta aggctgctgc atgcatcaaa
     2041 cacttggcat ttattgtaat ttttaaaaaa atatcacctt ttctaattgg gtgaacaaat
     2101 ttttgtcctg catctgtcca actaacttgc tttttaaaca taaccctatg gtagtaattt
     2161 atgtagaata aaggcattaa aaagcaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
     2221 aa
//
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