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Homo sapiens HORMA domain containing 1, mRNA (cDNA clone MGC:48336 IMAGE:5298160), complete cds

GenBank: BC047406.1

FASTA Graphics 

LOCUS       BC047406                1895 bp    mRNA    linear   PRI 17-JUL-2006
DEFINITION  Homo sapiens HORMA domain containing 1, mRNA (cDNA clone MGC:48336
            IMAGE:5298160), complete cds.
ACCESSION   BC047406
VERSION     BC047406.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1895)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 1895)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (28-FEB-2003) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
            cDNA Library Preparation: Michael J. Brownstein (NHGRI) &  Shiraki
            Toshiyuki and Piero Carninci (RIKEN)
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Baylor College of Medicine Human Genome
            Sequencing Center
            Center code: BCM-HGSC
            Web site: http://www.hgsc.bcm.tmc.edu/cdna/
            Contact: amg@bcm.tmc.edu
            Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
            Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
            A.N., Gibbs, R.A.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 91 Row: j Column: 2
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 31542506.
FEATURES             Location/Qualifiers
     source          1..1895
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:48336 IMAGE:5298160"
                     /tissue_type="Testis"
                     /clone_lib="NIH_MGC_97"
                     /lab_host="DH10B"
                     /note="Vector: pBluescriptR"
     gene            1..1895
                     /gene="HORMAD1"
                     /gene_synonym="DKFZP434A1315"
                     /gene_synonym="NOHMA"
                     /gene_synonym="RP11-363I22.1"
                     /db_xref="GeneID:84072"
                     /db_xref="HGNC:HGNC:25245"
                     /db_xref="MIM:609824"
     CDS             107..1291
                     /gene="HORMAD1"
                     /gene_synonym="DKFZP434A1315"
                     /gene_synonym="NOHMA"
                     /gene_synonym="RP11-363I22.1"
                     /codon_start=1
                     /product="HORMA domain containing 1"
                     /protein_id="AAH47406.1"
                     /db_xref="GeneID:84072"
                     /db_xref="HGNC:HGNC:25245"
                     /db_xref="MIM:609824"
                     /translation="MATAQLQRTPMSALVFPNKISTEHQSLVLVKRLLAVSVSCITYL
                     RGIFPECAYGTRYLDDLCVKILREDKNCPGSTQLVKWMLGCYDALQKKYLRMVVLAVY
                     TNPEDPQTISECYQFKFKYTNNGPLMDFISKNQSNESSMLSTDTKKASILLIRKIYIL
                     MQNLGPLPNDVCLTMKLFYYDEVTPPDYQPPGFKDGDCEGVIFEGEPMYLNVGEVSTP
                     FHIFKVKVTTERERMENIDSTILSPKQIKTPFQKILRDKDVEDEQEHYTSDDLDIETK
                     MEEQEKNPASSELEEPSLVCEEDEIMRSKESPDLSISHSQVEQLVNKTSELDMSESKT
                     RSGKVFQNKMANGNQPVKSSKENRKRSQHESGRIVLHHFDSSSQESVPKRRKFSEPKE
                     HI"
ORIGIN      
        1 atgcgcgtcg ggcacagcgc gtgcagcctc gtgcagctct tctggtctcc ggcgcccgcc
       61 cctcagacgt aatgttgaat taaagaaaat actttatcag aagaagatgg ccactgccca
      121 gttgcagagg actcccatga gtgcactggt atttcccaat aagatatcaa ctgaacacca
      181 gtctttggtg ttagtgaaga ggcttctagc agtttcagta tcctgtatca cgtatttgag
      241 gggaatattc ccagaatgcg cttatggaac aagatatcta gatgatcttt gtgtcaaaat
      301 actgagagaa gataaaaatt gcccaggatc tacacagtta gtgaaatgga tgctaggatg
      361 ttatgatgct ttacagaaaa aatatctaag gatggttgtt ctagctgtat acacaaaccc
      421 agaagatcct cagacaattt cagaatgtta ccaattcaaa ttcaaataca ccaataatgg
      481 accactcatg gacttcataa gtaaaaacca aagcaacgaa tctagcatgt tgtctactga
      541 caccaagaaa gcaagcattc tcctcattcg caagatttat atcctaatgc aaaatctggg
      601 gcctttacct aatgatgttt gtttgaccat gaaacttttt tactatgatg aagttacacc
      661 cccagattac cagcctcccg gttttaagga tggtgattgt gaaggagtta tatttgaagg
      721 ggaacctatg tatttaaatg tgggagaagt ctcaacacct tttcacatct tcaaagtaaa
      781 agtgaccact gagagagaac gaatggaaaa tattgactca actatactat caccaaaaca
      841 aataaaaaca ccatttcaaa aaatcctgag ggacaaagat gtagaagatg aacaggagca
      901 ttatacaagt gatgatttgg acattgaaac taaaatggaa gaacaggaaa aaaaccctgc
      961 atcttctgaa cttgaagaac caagtttagt ttgtgaggaa gatgaaatta tgaggtctaa
     1021 agaaagtcca gatctttcta tttctcattc tcaggttgag cagttagtca ataaaacatc
     1081 tgaacttgat atgtctgaaa gcaaaacaag aagtggaaaa gtctttcaga ataaaatggc
     1141 aaatggaaat caaccagtaa aatcttccaa agaaaatcgg aagagaagtc aacatgaatc
     1201 tgggagaata gtcctccatc actttgattc ttctagtcaa gagtcagtgc caaaaaggag
     1261 aaagtttagt gaaccaaagg aacatatata aaaattattt ttgttctgca ggcttgcaga
     1321 gttcttctca ccatttaaac tgaaggaccc tatattatat ttccctaact ctgaagatgt
     1381 atatgtagtt taaagcagtt tgtacactaa aactaagttt ttggctgact gtcatattgt
     1441 ggtccttaat cttgagataa atccaataga acttttgaat aaaagcaaaa gtacaaatgt
     1501 cataattgat tcggtaataa gtaaaatttc aaaattgatt ttgttcatta cctacttaat
     1561 atttccttta aatatatact aactgttaag gccctctaat gccatttttc taaacagtaa
     1621 tgtttacttt ggtattaaaa tttggtatgg attcactttt tacttatgtt aaaattatac
     1681 catttaactg gctcttttgt cattgtgctg ttattaaaac aatgttcttc aatattttga
     1741 cataatgtat taacatttta atatataatg tacaatttaa gaattggtgc tttaccttta
     1801 ctatgctttt ttttacagga caaaaagact gatttttaaa gtatggcatt ttttgcagca
     1861 taaataaaat attgttcagc aaaaaaaaaa aaaaa
//
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