LOCUS BC056643 1230 bp mRNA linear ROD 04-AUG-2006
DEFINITION Mus musculus aldo-keto reductase family 1, member C6, mRNA (cDNA
clone MGC:67956 IMAGE:5098276), complete cds.
ACCESSION BC056643
VERSION BC056643.1
KEYWORDS MGC.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 1230)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1230)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-AUG-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Jeffrey E. Green, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 123 Row: g Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 13487924.
FEATURES Location/Qualifiers
source 1..1230
/organism="Mus musculus"
/mol_type="mRNA"
/strain="FVB/N"
/db_xref="taxon:10090"
/clone="MGC:67956 IMAGE:5098276"
/tissue_type="Liver, normal. 5 month old male mouse."
/clone_lib="NCI_CGAP_Li9"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1230
/gene="Akr1c6"
/gene_synonym="3alpha-HSD"
/db_xref="GeneID:83702"
/db_xref="MGI:MGI:1933427"
CDS 31..1002
/gene="Akr1c6"
/gene_synonym="3alpha-HSD"
/codon_start=1
/product="aldo-keto reductase family 1, member C6"
/protein_id="AAH56643.1"
/db_xref="GeneID:83702"
/db_xref="MGI:MGI:1933427"
/translation="MDSKQQTVRLSDGHFIPILGFGTYAPQEVPKSKATEATKIAIDA
GFRHIDSASMYQNEKEVGLAIRSKIADGTVKREDIFYTSKVWCTFHRPELVRVCLEQS
LKQLQLDYVDLYLIHFPMAMKPGENYLPKDENGKLIYDAVDICDTWEAMEKCKDAGLA
KSIGVSNFNRRQLEKILKKPGLKYKPVCNQVECHPYLNQGKLLDFCRSKDIVLVAYSA
LGSHREKQWVDQSSPVLLDNPVLGSMAKKYNRTPALIALRYQLQRGVVVLAKSFSEKR
IKENMQVFEFQLTSEDMKVLDDLNKNIRYISGSSFKDHPDFPFWDEY"
ORIGIN
1 gtatcttctc agttggtggg ctgagaagcc atggattcta agcagcagac agtgcgtcta
61 agtgatggtc acttcatccc tatactgggg tttggtacct atgcacctca agaggtacct
121 aagagtaagg ctacagaagc tactaaaata gccatagatg ctggtttccg ccatattgat
181 tctgcttcta tgtatcaaaa tgaaaaggaa gtaggactag ccatccgaag caagatagca
241 gatggcactg tgaagaggga agatatattt tacacatcaa aggtttggtg tacttttcat
301 cgtccagaac tcgtacgggt ctgcttggaa cagtcattga agcaactcca gttggactat
361 gtggacctgt acctcattca tttcccaatg gccatgaagc cgggagaaaa ttatctccca
421 aaagatgaaa atggaaaatt aatatatgat gctgtggata tctgtgacac ctgggaagcc
481 atggagaaat gcaaggatgc aggattggcc aagtccattg gggtgtccaa ctttaaccgc
541 aggcagctgg agaagatcct gaaaaagccg gggctcaagt acaagcctgt gtgcaaccag
601 gtagaatgtc atccttatct caatcaggga aaacttctgg atttctgcag gtcaaaagac
661 attgttctgg ttgcttacag tgctctggga agccatcgtg aaaaacaatg ggttgatcag
721 agctctcctg ttcttttgga taatccagtt cttggctcaa tggcaaaaaa gtacaatcga
781 actcctgcgc tgattgccct tcgctaccag ctacaacgtg gggttgtggt cctcgccaag
841 agtttctctg agaagaggat aaaagagaat atgcaggttt ttgaatttca gttgacttca
901 gaggacatga aagtcctcga tgacctgaat aaaaatatcc gatacataag tggttctagc
961 tttaaggacc atcctgattt tccattttgg gatgaatact aactggaggt ccattttgtg
1021 ccttgtgcca gatgtcactg cattggaaga gtgtatagga agagtattct caaaatgtga
1081 tgattacata tcaccctaat ccaagcttct gagcaattct ggctctgctg aatctaccat
1141 tttaaccaag aaagccaaaa ctatgtatat ttctcctttc taagaaataa aagaatcgtt
1201 attctttagc atttaaaaaa aaaaaaaaaa
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