LOCUS BC094762 4231 bp mRNA linear PRI 17-JUL-2006
DEFINITION Homo sapiens plakophilin 2, mRNA (cDNA clone MGC:104640
IMAGE:30344248), complete cds.
ACCESSION BC094762
VERSION BC094762.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4231)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4231)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-MAY-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Stefan Hansson
cDNA Library Preparation: Michael Brownstein / Ted Usdin
Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 198 Row: j Column: 13.
FEATURES Location/Qualifiers
source 1..4231
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:104640 IMAGE:30344248"
/tissue_type="Placenta, normal"
/clone_lib="NIH_MGC_147"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..4231
/gene="PKP2"
/gene_synonym="ARVD9"
/db_xref="GeneID:5318"
/db_xref="HGNC:HGNC:9024"
/db_xref="MIM:602861"
CDS 39..2552
/gene="PKP2"
/gene_synonym="ARVD9"
/codon_start=1
/product="plakophilin 2"
/protein_id="AAH94762.1"
/db_xref="GeneID:5318"
/db_xref="HGNC:HGNC:9024"
/db_xref="MIM:602861"
/translation="MAAPGAPAEYGYIRTVLGQQILGQLDSSSLALPSEAKLKLAGSS
GRGGQTVKSLRIQEQVQQTLARKGRSSVGNGNLHRTSSVPEYVYNLHLVENDFVGGRS
PVPKTYDMLKAGTTATYEGRWGRGTAQYSSQKSVEERSLRHPLRRLEISPDSSPERAH
YTHSDYQYSQRSQAGHTLHHQESRRAALLVPPRYARSEIVGVSRAGTTSRQRHFDTYH
RQYQHGSVSDTVFDSIPANPALLTYPRPGTSRSMGNLLEKENYLTAGLTVGQVRPLVP
LQPVTQNRASRSSWHQSSFHSTRTLREAGPSVAVDSSGRRAHLTVGQAAAGGSGNLLT
ERSTFTDSQLGNADMEMTLERAVSMLEADHMPPSRISAAATFIQHECFQKSEARKRVN
QLRGILKLLQLLKVQNEDVQRAVCGALRNLVFEDNDNKLEVAELNGVPRLLQVLKQTR
DLETKKQITGLLWNLSSNDKLKNLMITEALLTLTENIIIPFSGWPEGDYPKANGLLDF
DIFYNVTGCLRNMSSAGADGRKAMRRCDGLIDSLVHYVRGTIADYQPDDKATENCVCI
LHNLSYQLEAELPEKYSQNIYIQNRNIQTDNNKSIGCFGSRSRKVKEQYQDVPMPEEK
SNPKGVEWLWHSIVIRMYLSLIAKSVRNYTQEASLGALQNLTAGSGPMPTSVAQTVVQ
KESGLQHTRKMLHVGDPSVKKTAISLLRNLSRNLSLQNEIAKETLPDLVSIIPDTVPS
TDLLIETTASACYTLNNIIQNSYQNARDLLNTGGIQKIMAISAGDAYASNKASKAASV
LLYSLWAHTELHHAYKKAQFKKTDFVNSRTAKAYHSLKD"
ORIGIN
1 agaggcaggc gagcagctcg gtcgccccca ccggccccat ggcagccccc ggcgccccag
61 ctgagtacgg ctacatccgg accgtcctgg gccagcagat cctgggacaa ctggacagct
121 ccagcctggc gctgccctcc gaggccaagc tgaagctggc ggggagcagc ggccgcggcg
181 gccagacagt caagagcctg cggatccagg agcaggtgca gcagaccctc gcccggaagg
241 gccgcagctc cgtgggcaac ggaaatcttc accgaaccag cagtgttcct gagtatgtct
301 acaacctaca cttggttgaa aatgattttg ttggaggccg ttcccctgtt cctaaaacct
361 atgacatgct aaaggctggc acaactgcca cttatgaagg tcgctgggga agaggaacag
421 cacagtacag ctcccagaag tccgtggaag aaaggtcctt gaggcatcct ctgaggagac
481 tggagatttc tcctgacagc agcccggaga gggctcacta cacgcacagc gattaccagt
541 acagccagag aagccaggct gggcacaccc tgcaccacca agaaagcagg cgggccgccc
601 tcctagtgcc accgagatat gctcgttccg agatcgtggg ggtcagccgt gctggcacca
661 caagcaggca gcgccacttt gacacatacc acagacagta ccagcatggc tctgttagcg
721 acaccgtttt tgacagcatc cctgccaacc cggccctgct cacgtacccc aggccaggga
781 ccagccgcag catgggcaac ctcttggaga aggagaacta cctgacggca gggctcactg
841 tcgggcaggt caggccgctg gtgcccctgc agcccgtcac tcagaacagg gcttccaggt
901 cctcctggca tcagagctcc ttccacagca cccgcacgct gagggaagct gggcccagtg
961 tcgccgtgga ttccagcggg aggagagcgc acttgactgt cggccaggcg gccgcagggg
1021 gaagtgggaa tctgctcact gagagaagca ctttcactga ctcccagctg gggaatgcag
1081 acatggagat gactctggag cgagcagtga gtatgctcga ggcagaccac atgccgccat
1141 ccaggatttc tgctgcagct actttcatac agcacgagtg cttccagaaa tctgaagctc
1201 ggaagagggt taaccagctt cgtggcatcc tcaagcttct gcagctccta aaagttcaga
1261 atgaagacgt tcagcgagct gtgtgtgggg ccttgagaaa cttagtattt gaagacaatg
1321 acaacaaatt ggaggtggct gaactaaatg gggtacctcg gctgctccag gtgctgaagc
1381 aaaccagaga cttggagact aaaaaacaaa taacaggttt gctgtggaat ttgtcatcta
1441 atgacaaact caagaatctc atgataacag aagcattgct tacgctgacg gagaatatca
1501 tcatcccctt ttctgggtgg cctgaaggag actacccaaa agcaaatggt ttgctcgatt
1561 ttgacatatt ctacaacgtc actggatgcc taagaaacat gagttctgct ggcgctgatg
1621 ggagaaaagc gatgagaaga tgtgacggac tcattgactc actggtccat tatgtcagag
1681 gaaccattgc agattaccag ccagatgaca aggccacgga gaattgtgtg tgcattcttc
1741 ataacctctc ctaccagctg gaggcagagc tcccagagaa atattcccag aatatctata
1801 ttcaaaaccg gaatatccag actgacaaca acaaaagtat tggatgtttt ggcagtcgaa
1861 gcaggaaagt aaaagagcaa taccaggacg tgccgatgcc ggaggaaaag agcaacccca
1921 agggcgtgga gtggctgtgg cattccattg ttataaggat gtatctgtcc ttgatcgcca
1981 aaagtgtccg caactacaca caagaagcat ccttaggagc tctgcagaac ctcacggccg
2041 gaagtggacc aatgccgaca tcagtggctc agacagttgt ccagaaggaa agtggcctgc
2101 agcacacccg aaagatgctg catgttggtg acccaagtgt gaaaaagaca gccatctcgc
2161 tgctgaggaa tctgtcccgg aatctttctc tgcagaatga aattgccaaa gaaactctcc
2221 ctgatttggt ttccatcatt cctgacacag tcccgagtac tgaccttctc attgaaacta
2281 cagcctctgc ctgttacaca ttgaacaaca taatccaaaa cagttaccag aatgcacgcg
2341 accttctaaa caccgggggc atccagaaaa ttatggccat tagtgcaggc gatgcctatg
2401 cctccaacaa agcaagtaaa gctgcttccg tccttctgta ttctctgtgg gcacacacgg
2461 aactgcatca tgcctacaag aaggctcagt ttaagaagac agattttgtc aacagccgga
2521 ctgccaaagc ctaccactcc cttaaagact gaggaaaatg acaaagtatt ctcggctgca
2581 aaaatcccca aaggaaaaca cctatttttc tactacccag cccaagaaac ctcaaaagca
2641 tgccttgttt ctatccttct ctatttccgt ggtcccctga atccagaaaa caaatagaac
2701 ataattttat gagtcttcca gaagaccttt gcaagtttgc caccagtaga taccggccac
2761 aggctcgaca aatagtggtc tttgttatta gggcttatgg tagatggctt cctggaatca
2821 aaatgtgaat tcatgtggaa gggacattaa tccaataaat aaggaaagaa gctgttgcat
2881 tactgggatt ttaaaagttt gatttacatt tatattcctt ttctggttcc catgttttgt
2941 cactcatgtg cacattgctt cgccattggg cctccagtgt attgttctgc agtgttgaaa
3001 cagaatggaa atgacaagaa atatctgcag ttatccagga gaaagtataa tggcaaaatt
3061 attggtttct ttctttactt tgtgcttgtt tttatcccct tgggttgttt ttctctgatt
3121 tttaaataaa cttaagaaat ttagattaca gagtatgcat gactgtaaga aaaagaaatt
3181 gagaggaagt gatcatagca aattaaagaa gtcttttcct cccagaactt aaagtaaaat
3241 aaaaaataaa taaataaata aaatcttttc cacagagaaa ggcaactgtg atgataaaat
3301 ttaacgttcc cccaaacact gagtcaatga gatttttctc aggagatact ttacctataa
3361 caatgccgtt aaatccaaat ctcttctaaa cgatggcatt ctatgtaatg cctttcctgg
3421 acttttttgg ccactgccct ggactagtga aagaatggac tctatcttta tctgcaagag
3481 gaactaaggc cttctatcag actgcctggc cagcctgggg cactgaaaat acggctcatg
3541 ttaatgagtt acattatcag ccagcccagc cttgcccacc atttaagaaa tatcacagag
3601 ccactagatc tcatatgatc ttcttcaagc cattatttta actcaagaaa actctagaga
3661 agaaaagtga agaagtcatg ttgaagaaga tgtaagaatg tgtcaagacc atccagaaat
3721 gatatgagaa atactgatat tttaaatagt gacatcatcc agcgaaatga atctacatta
3781 aatgttgttt taactgcgct atgattaaaa ccattcatat agagttagtc tttacaacta
3841 ctattctgtt attttttttt ttaatctgac aacatttgtc ctaagtaaga taagcaaaaa
3901 aattcttcaa ctccttttgg caagaaaact gtaacagaaa ataaattttg aatgtgtact
3961 taagtcttta ttatatttga aacaattttt tttcaatttt aaaagctgaa tgaagacaac
4021 ttaggttgct aacctagttc aaaatgaaat tatttagata ccaattttta aaatactgga
4081 gagaatttat atgtcttttt ccagagttct gatgataagc atttggagtg catttattcc
4141 tccagataat aaatgtgtgt tcagaacttt ttgtgttttt taaggcatta ataaagcctt
4201 cgataatatt aaatacaaaa aaaaaaaaaa a
//