LOCUS BC132248 898 bp mRNA linear ROD 06-DEC-2007
DEFINITION Mus musculus zinc finger, FYVE domain containing 21, mRNA (cDNA
clone MGC:163879 IMAGE:40130525), complete cds.
ACCESSION BC132248
VERSION BC132248.1
KEYWORDS MGC.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 898)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 898)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-JAN-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Ambion
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCK Plate: 5 Row: O Column: 14.
FEATURES Location/Qualifiers
source 1..898
/organism="Mus musculus"
/mol_type="mRNA"
/db_xref="taxon:10090"
/clone="MGC:163879 IMAGE:40130525"
/tissue_type="Brain, PCR rescued clones"
/clone_lib="NIH_MGC_378"
/lab_host="DH10B"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: AATTATTG"
gene 1..898
/gene="Zfyve21"
/db_xref="GeneID:68520"
/db_xref="MGI:MGI:1915770"
CDS 37..675
/gene="Zfyve21"
/codon_start=1
/product="zinc finger, FYVE domain containing 21"
/protein_id="AAI32249.1"
/db_xref="GeneID:68520"
/db_xref="MGI:MGI:1915770"
/translation="MVPEHRAFGSPFGLEEPQWVPDKECPRCMQCDAKFDFITRKHHC
RRCGKCFCDRCCSQKVPLRRMCFVDPVRQCADCALVSHREAEFYDKQLKVLLSGATFL
VTFGDSEKPETMVCRLSNNQRCLVLDGDSHREIEIAHVCTVQILTEGFTPGAGSTRAT
GMLLQYTVPGAEAAAQLRLMAGEDASGSKRQAAAWLAAMHKATKLLYESRDQ"
ORIGIN
1 gccaagaagc ttgtgcgctc gccaagtggc ctgcgcatgg tgccggagca ccgcgccttc
61 ggaagccctt tcggcttgga ggagccgcag tgggttccgg acaaggagtg cccaagatgt
121 atgcagtgtg atgccaagtt tgacttcatc accagaaagc atcactgccg ccgctgtggg
181 aagtgcttct gcgacaggtg ctgcagccag aaggtgccac ttcggcgcat gtgcttcgtg
241 gacccagtgc gccagtgtgc tgactgtgcc ctggtgtccc accgagaggc ggagttttat
301 gacaagcagc tgaaggtgct cctaagtgga gctaccttcc ttgttacttt tggggactca
361 gagaagcccg agaccatggt ttgtcgtctt tccaacaacc agaggtgctt ggttctggat
421 ggggacagtc atcgtgaaat cgagattgca catgtctgta ctgttcagat tctcacagaa
481 ggcttcactc ctggagcagg cagcacccga gccactggca tgctcctgca gtacacagtg
541 ccaggggcag aggctgcagc acagctgagg ctgatggccg gagaggacgc gagcggcagc
601 aagaggcagg cagcagcgtg gctggcagcc atgcacaagg ctaccaagct cctctatgaa
661 tcacgagacc agtaactgca agggaactga actcggagca cgtcgggtta cataaccaag
721 ctgcttgccc ctgcctgcac tctcagggtc ttccctgtgt gtgcttggaa atgcaattca
781 agtgtctgga agcagagtat cacttaccta gtgcaatatg tacaccgctg attaatgctg
841 taaagagctt atgttgttgt gcattgtggt ccttcagtag ggttgggaga agctgcac
//