LOCUS BT004120 1125 bp mRNA linear PLN 14-FEB-2003
DEFINITION Arabidopsis thaliana clone RAFL15-21-G04 (R20650) unknown protein
(At5g37930) mRNA, complete cds.
ACCESSION BT004120
VERSION BT004120.1
KEYWORDS FLI_CDNA.
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 1125)
AUTHORS Yamada,K., Chan,M.M., Chang,C.H., Dale,J.M., Hsuan,V.W., Lee,J.M.,
Onodera,C.S., Quach,H.L., Tang,C., Toriumi,M., Wong,C., Wu,H.C.,
Yu,G., Yuan,S., Carninci,P., Chen,H., Cheuk,R., Hayashizaki,Y.,
Ishida,J., Jones,T., Kamiya,A., Kawai,J., Kim,C.J., Narusaka,M.,
Nguyen,M., Palm,C.J., Sakurai,T., Satou,M., Seki,M., Shinn,P.,
Southwick,A., Tripp,M.G., Wu,T., Shinozaki,K., Davis,R.W.,
Ecker,J.R. and Theologis,A.
TITLE Arabidopsis Full Length cDNA Clones
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 1125)
AUTHORS Yamada,K., Chan,M.M., Chang,C.H., Dale,J.M., Hsuan,V.W., Lee,J.M.,
Onodera,C.S., Quach,H.L., Tang,C.C., Toriumi,M., Wong,C., Wu,H.C.,
Yu,G., Yuan,S., Carninci,P., Chen,H., Cheuk,R., Hayashizaki,Y.,
Ishida,J., Jones,T., Kamiya,A., Kawai,J., Kim,C.J., Narusaka,M.,
Nguyen,M., Palm,C.J., Sakurai,T., Satou,M., Seki,M., Shinn,P.,
Southwick,A., Tripp,M.G., Wu,T., Shinozaki,K., Davis,R.W.,
Ecker,J.R. and Theologis,A.
TITLE Direct Submission
JOURNAL Submitted (14-FEB-2003) Plant Gene Expression Center, 800 Buchanan
Street, Albany, CA 94710, USA
COMMENT RIKEN Genomic Sciences Center (GSC) members carried out the
collection and clustering of RAFL cDNAs (RAFL cDNA : 'RIKEN
Arabidopsis Full-Length cDNA'): Seki,M., Narusaka,M., Ishida,J.,
Satou,M., Kamiya,A., Sakurai,T., Carninci,P., Kawai,J.,
Hayashizaki,Y. and Shinozaki,K.
The Salk, Stanford, PGEC (SSP) Consortium members carried out the
sequencing and annotation of the RAFL cDNAs: Yamada,K., Chan,M.M.,
Chang,C.H., Dale,J.M., Hsuan,V.W., Lee,J.M., Onodera,C.S.,
Quach,H.L., Tang,C.C., Toriumi,M., Wong,C., Wu,H.C., Yu,G.,
Yuan,S., Chen,H., Cheuk,R., Jones,T., Kim,C.J., Nguyen,M.,
Palm,C.J., Shinn,P., Southwick,A., Tripp,M.G., Wu,T., Davis,R.W.,
Ecker,J.R. and Theologis,A.
Yamada,K. (SSP/PGEC) and Seki,M. (RIKEN GSC) contributed equally to
this work. Shinozaki,K. (RIKEN GSC) and Theologis,A. (SSP/PGEC)
contributed equally to this work as PIs.
Annotation based on July 2002 version of the Arabidopsis genome
submitted to Genbank.
FEATURES Location/Qualifiers
source 1..1125
/organism="Arabidopsis thaliana"
/mol_type="mRNA"
/db_xref="taxon:3702"
/chromosome="5"
/clone="RAFL15-21-G04 (R20650)"
/ecotype="Columbia"
/note="This clone is in a modified pBluescript vector2
(lambda PS) as a BamHI/XhoI insert."
gene 1..1125
/gene="At5g37930"
5'UTR 1..18
/gene="At5g37930"
CDS 19..1068
/gene="At5g37930"
/experiment="experimental evidence, no additional details
recorded"
/codon_start=1
/product="unknown protein"
/protein_id="AAO42143.1"
/translation="MARFSVCGGDDGEGPSNNNHQSRKRQRLPSIDENEEDAETSDAG
SSGEEDEDETQNQGMRPESEDRGSTSDDSDREVVIEERRFGKFVNSQSSSSSKDSPLS
VTLLDPDVLDCPICCEPLKIPIFQCDNGHLACTLCCTKVRNRCPSCTLPIGYVRCRAM
EKVIEASRVSCLNAKYGCKESTSYGNRFSHEQVCVFTPCSCPILDCHYTGYYKDLNNH
VRAEHKDDLISFVWNTRLTISLDLNKKTTILQEENDGHVIVVQVFRALHAVYVSVSCI
APLTPGVGRLSCRLAKITVDSLLKQGFMVKNIQKVTNEHPEDGFMLIPSYLFSGNDNL
NLQIWIGHGRIFVHS"
3'UTR 1069..1125
/gene="At5g37930"
ORIGIN
1 gaaaattaga tctgacttat ggcgagattc tcagtttgcg gaggagacga cggagaagga
61 ccaagtaaca acaatcacca atcccggaaa aggcaacgac ttccttcaat cgatgaaaat
121 gaagaagacg ccgagacctc cgacgccgga agttccggtg aagaagacga agacgaaact
181 cagaatcaag gaatgagacc agaatctgag gatcgaggat caacgagcga tgatagcgat
241 cgtgaagttg tgattgagga gagacgattt ggtaaatttg taaatagtca gagttcttct
301 tctagcaaag attcgcctct ttctgtaacg ttattggatc cagatgttct tgattgtcct
361 atttgttgcg agccattgaa gattcctatc tttcagtgtg ataatggtca tctggcttgt
421 actttgtgct gcaccaaagt gaggaacaga tgcccgtcgt gtacattacc gataggttat
481 gttcgttgca gagctatgga gaaggttata gaagcatcta gagtctcgtg tctaaatgcc
541 aaatacgggt gcaaggagag tacctcctat ggaaaccgtt ttagtcatga gcaggtatgt
601 gttttcaccc cttgttcttg ccccatactt gactgccact acactgggta ttacaaggat
661 ctcaacaatc acgtccgtgc tgaacacaaa gatgatctga tctcgttcgt gtggaatact
721 cgtttaacca ttagcttgga cctcaataag aagaccacaa ttcttcagga agaaaacgat
781 gggcatgtga ttgtagtcca agttttcagg gctttgcatg ctgtgtatgt cagtgtgagc
841 tgtattgcac ctttgacacc gggagtgggt aggttatcat gccgtcttgc gaagataacc
901 gttgatagct tactgaagca aggatttatg gtgaagaaca tacaaaaagt gacgaatgaa
961 catcccgaag atggtttcat gttgattcct tcctatttgt tctctggtaa tgacaacttg
1021 aatctgcaga tttggatcgg ccatggccgg atctttgttc attcgtgatt atgtaaagaa
1081 ctaaagttga atcaaaagct tgtcatgaac aaaaaaaaaa aaaaa
//