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GenBank: CP005532.2
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LOCUS CP005532 1443 bp DNA linear PLN 13-MAY-2016 DEFINITION Saccharomyces cerevisiae YJM1199 chromosome XIV, partial sequence. ACCESSION CP005532 REGION: 710110..711552 VERSION CP005532.2 DBLINK BioProject: PRJNA189883 BioSample: SAMN01923149 KEYWORDS . SOURCE Saccharomyces cerevisiae YJM1199 ORGANISM Saccharomyces cerevisiae YJM1199 Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces. REFERENCE 1 (bases 1 to 1443) AUTHORS Strope,P.K., Skelly,D.A., Kozmin,S.G., Mahadevan,G., Stone,E.A., Magwene,P.M., Dietrich,F.S. and McCusker,J.H. TITLE The 100-genomes strains, an S. cerevisiae resource that illuminates its natural phenotypic and genotypic variation and emergence as an opportunistic pathogen JOURNAL Genome Res. (2015) In press PUBMED 25840857 REMARK Publication Status: Available-Online prior to print REFERENCE 2 (bases 1 to 1443) AUTHORS Strope,P.K., Dietrich,F.S., Kozmin,S.G. and McCusker,J.H. TITLE Direct Submission JOURNAL Submitted (22-APR-2013) Molecular Genetics and Microbiology and Institute for Genome Sciences & Policy, Duke University, 287 CARL building Research Drive, Durham, NC 27710, USA REFERENCE 3 (bases 1 to 1443) AUTHORS Strope,P.K., Dietrich,F.S. and McCusker,J.H. TITLE Direct Submission JOURNAL Submitted (03-MAR-2016) Molecular Genetics and Microbiology Department, Duke University, 287 CARL building Research Drive, Durham, NC 27710, USA REMARK Sequence update by submitter COMMENT On May 13, 2016 this sequence version replaced CP005532.1. Scaffolding and annotation based on Saccharomyces cerevisiae S288C chromosome XIV NC_001146.8. ##Genome-Assembly-Data-START## Assembly Method :: ABySS v. 1.3.4, Velvet v. 1.2.01, pilon v. 1.13, in-house pair checking, depth of coverage analysis and localized alignment tools, hand edited Reference-guided Assembly :: NC_001146.8 Genome Coverage :: 60x Sequencing Technology :: Illumina Hiseq, 100x100 bp paired-end reads ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..1443 /organism="Saccharomyces cerevisiae YJM1199" /mol_type="genomic DNA" /strain="YJM1199" /isolation_source="clinical" /db_xref="taxon:1294335" /chromosome="XIV" /geo_loc_name="USA: MI" gene <1..>1443 /gene="BIO3" /locus_tag="H783_YJM1199N00390" mRNA <1..>1443 /gene="BIO3" /locus_tag="H783_YJM1199N00390" /product="Bio3p" CDS 1..1443 /gene="BIO3" /locus_tag="H783_YJM1199N00390" /note="corresponds to s288c YNR058W" /codon_start=1 /product="Bio3p" /protein_id="AJT15701.1" /db_xref="SGD:S000005341" /translation="MSQEISYTPDVAELLDFDKKHIWHPYTSLSSPLNVYPVKSAHGC KLVLDTDSPVDVEVIDAMSSWWCVIHGYNNPELNEALTKQMLKFSHVLLGGFTHKGAV NLVQKLLKVIDEPSLQYCFLADSGSVAVEVALKMALQSNMSGEATKNRTKFLTIKNGY HGDTFGAMSVCDPENSMHHIYNDRLSENIFAQAPSIVDGLPTSQNGFEDHWNAEEVTD LKKQFELHSDKICAVILEPILQGAGGLRPYHPQFLIEVQKLCNQYDVLFIMDEIATGF GRTGEIFAFKHCQKYQDQHGISPSDQIKVVPDILCVGKGLTSGYMTMSAVVVNDKVAS RISSPNSPTGGCFMHGPTFMGNALACSVAEKSMDILLRGEWRKQVSAIENQIYRELYQ YIKNPDNGLIGTVVKRVSVIGAVGIVELYKKTDPEWFQKKFISKGVHIRPFNCLCYIM PPYVITTEELTKVNQVLIEVLHEWKSHINQ" ORIGIN 1 atgtcccaag aaatttcata tacaccagat gtcgcggaac tgctagactt tgataaaaaa 61 catatttggc atccttatac gtcattgagt tcaccattga acgtttatcc ggtaaagagt 121 gctcacggat gcaagctggt gttggatacc gactcaccag tggacgtcga ggtgatcgac 181 gccatgtcgt cgtggtggtg tgttattcac gggtacaata atccagaact aaatgaggcc 241 cttaccaagc agatgttaaa gttttctcac gtccttcttg gtggattcac ccataaagga 301 gctgtgaatc tagtccaaaa acttttaaaa gtgattgatg aaccctcttt gcagtactgt 361 ttcctcgcag attctggctc agtagcagtg gaagtagctt tgaagatggc tttacaatca 421 aacatgtcag gggaagctac taaaaataga acaaagtttt tgacaatcaa gaacgggtat 481 catggtgata catttggcgc tatgagtgtt tgtgatcctg agaattctat gcatcatatc 541 tacaacgatc gactcagtga gaacatcttc gcccaagctc cctctattgt cgatggcctt 601 ccaaccagcc agaacggttt cgaggaccat tggaatgcag aagaagttac cgatctcaag 661 aagcaatttg aattgcatag tgataagatc tgtgctgtga ttttggagcc tatcttacag 721 ggtgcaggag gtttgcgacc ataccatcca cagttcttaa tcgaagttca gaaactatgt 781 aaccaatacg acgttttatt catcatggac gagattgcta caggatttgg tagaacaggt 841 gagattttcg cattcaagca ctgtcaaaaa taccaggacc aacatggcat cagtccttcc 901 gatcagatca aagttgttcc tgacatattg tgcgttggga agggcttaac cagtggatat 961 atgactatga gtgcagtggt agtcaacgac aaagttgctt ccagaatctc ttctccaaat 1021 agccctactg gtggctgctt catgcatggc cccaccttca tgggcaatgc cctggcatgc 1081 agtgtggcag aaaagtctat ggatatacta ctgcgtggcg agtggagaaa acaagtgtct 1141 gcaattgaaa accaaattta tagagaacta taccagtaca tcaagaaccc agataatggg 1201 ctcattggaa ctgttgttaa gcgtgtgtca gttattggag ctgtaggtat cgtagagcta 1261 tacaagaaga cagatcccga gtggttccag aaaaagttta tatccaaggg agtacatatc 1321 cgacctttca actgcctgtg ttacattatg ccaccatatg tgatcacgac agaggaattg 1381 acgaaggtta atcaagtctt gattgaagta ttacatgagt ggaaatccca cataaaccaa 1441 tga //
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