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MAG TPA_asm: Holosporaceae bacterium UBA3830, whole genome shotgun sequencing project

GenBank: DGIE00000000.1

  • This entry is the master record for a whole genome shotgun sequencing project and contains no sequence data.

LOCUS       DGIE01000000             103 rc    DNA     linear   ENV 28-SEP-2017
DEFINITION  MAG TPA_asm: Holosporaceae bacterium UBA3830, whole genome shotgun
            sequencing project.
ACCESSION   DGIE00000000
VERSION     DGIE00000000.1
DBLINK      BioProject: PRJNA348753
            BioSample: SAMN06451310
            Sequence Read Archive: SRR5323025
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Holosporaceae bacterium UBA3830 (gut metagenome)
  ORGANISM  Holosporaceae bacterium UBA3830
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Holosporales; Holosporaceae.
REFERENCE   1  (bases 1 to 103)
  AUTHORS   Parks,D.H., Rinke,C., Chuvochina,M., Chaumeil,P.A., Woodcroft,B.J.,
            Evans,P.N., Hugenholtz,P. and Tyson,G.W.
  TITLE     Recovery of nearly 8,000 metagenome-assembled genomes substantially
            expands the tree of life
  JOURNAL   Nat Microbiol (2017) In press
   PUBMED   28894102
  REMARK    Publication Status: Available-Online prior to print
REFERENCE   2  (bases 1 to 103)
  AUTHORS   Parks,D.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-AUG-2017) School of Chemistry and Molecular
            Biosciences, University of Queensland, Chemistry Bld, Cooper Road,
            St Lucia, Brisbane, Queensland 4072, Australia
COMMENT     The Holosporaceae bacterium UBA3830 whole genome shotgun (WGS)
            project has the project accession DGIE00000000.  This version of
            the project (01) has the accession number DGIE01000000, and
            consists of sequences DGIE01000001-DGIE01000103.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC de novo assembler v. 4.4.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.52x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..103
                     /organism="Holosporaceae bacterium UBA3830"
                     /mol_type="genomic DNA"
                     /isolate="UBA3830"
                     /isolation_source="high methane producing sheep"
                     /db_xref="taxon:1951932"
                     /environmental_sample
                     /metagenome_source="gut metagenome"
                     /note="Genome binned from sequencing reads available in
                     SRX290719 metagenome;
                     metagenomic"
WGS         DGIE01000001-DGIE01000103
//
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