LOCUS JAKXCS010000000 46 rc DNA linear BCT 02-JUN-2022
DEFINITION Lactobacillus mulieris strain DZD_CM_20_S788-bin_1, whole genome
shotgun sequencing project.
ACCESSION JAKXCS000000000
VERSION JAKXCS000000000.1
DBLINK BioProject: PRJNA799737
BioSample: SAMN25207475
KEYWORDS WGS.
SOURCE Lactobacillus mulieris
ORGANISM Lactobacillus mulieris
Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
Lactobacillaceae; Lactobacillus.
REFERENCE 1 (bases 1 to 46)
AUTHORS Bloom,S.M., Mafunda,N.A., Woolston,B.M., Hayward,M.R.,
Frempong,J.F., Abai,A.B., Xu,J., Mitchell,A.J., Westergaard,X.,
Hussain,F.A., Xulu,N., Dong,M., Dong,K.L., Gumbi,T., Ceasar,F.X.,
Rice,J.K., Choksi,N., Ismail,N., Ndung'u,T., Ghebremichael,M.S.,
Relman,D.A., Balskus,E.P., Mitchell,C.M. and Kwon,D.S.
TITLE Cysteine dependence of Lactobacillus iners is a potential
therapeutic target for vaginal microbiota modulation
JOURNAL Nat Microbiol 7 (3), 434-450 (2022)
PUBMED 35241796
REFERENCE 2 (bases 1 to 46)
AUTHORS Elsherbini,J.
TITLE Direct Submission
JOURNAL Submitted (23-JAN-2022) Ragon Institute, Massachusetts General
Hospital, 400 Technology Square, Cambridge, MA 02139, USA
COMMENT The Lactobacillus mulieris whole genome shotgun (WGS) project has
the project accession JAKXCS000000000. This version of the project
(01) has the accession number JAKXCS010000000, and consists of
sequences JAKXCS010000001-JAKXCS010000046.
DNA was extracted from a pure culture and then Nexterra libraries
were prepared. To remove possible contamination, resulting
sequences were binned using MetBAT2.
##Genome-Assembly-Data-START##
Assembly Method :: SPAdes v. 3.13.032
Genome Representation :: Full
Expected Final Version :: Yes
Genome Coverage :: 73x
Sequencing Technology :: Illumina HiSeq
##Genome-Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..46
/organism="Lactobacillus mulieris"
/mol_type="genomic DNA"
/strain="DZD_CM_20_S788-bin_1"
/isolation_source="ectocervical mucosa"
/host="Homo sapiens"
/db_xref="taxon:2508708"
/geo_loc_name="USA"
WGS JAKXCS010000001-JAKXCS010000046
//