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Lactobacillus mulieris strain DZD_CM_20_S788-bin_1, whole genome shotgun sequencing project

GenBank: JAKXCS000000000.1

  • This entry is the master record for a whole genome shotgun sequencing project and contains no sequence data.

LOCUS       JAKXCS010000000           46 rc    DNA     linear   BCT 02-JUN-2022
DEFINITION  Lactobacillus mulieris strain DZD_CM_20_S788-bin_1, whole genome
            shotgun sequencing project.
ACCESSION   JAKXCS000000000
VERSION     JAKXCS000000000.1
DBLINK      BioProject: PRJNA799737
            BioSample: SAMN25207475
KEYWORDS    WGS.
SOURCE      Lactobacillus mulieris
  ORGANISM  Lactobacillus mulieris
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lactobacillus.
REFERENCE   1  (bases 1 to 46)
  AUTHORS   Bloom,S.M., Mafunda,N.A., Woolston,B.M., Hayward,M.R.,
            Frempong,J.F., Abai,A.B., Xu,J., Mitchell,A.J., Westergaard,X.,
            Hussain,F.A., Xulu,N., Dong,M., Dong,K.L., Gumbi,T., Ceasar,F.X.,
            Rice,J.K., Choksi,N., Ismail,N., Ndung'u,T., Ghebremichael,M.S.,
            Relman,D.A., Balskus,E.P., Mitchell,C.M. and Kwon,D.S.
  TITLE     Cysteine dependence of Lactobacillus iners is a potential
            therapeutic target for vaginal microbiota modulation
  JOURNAL   Nat Microbiol 7 (3), 434-450 (2022)
   PUBMED   35241796
REFERENCE   2  (bases 1 to 46)
  AUTHORS   Elsherbini,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JAN-2022) Ragon Institute, Massachusetts General
            Hospital, 400 Technology Square, Cambridge, MA 02139, USA
COMMENT     The Lactobacillus mulieris whole genome shotgun (WGS) project has
            the project accession JAKXCS000000000.  This version of the project
            (01) has the accession number JAKXCS010000000, and consists of
            sequences JAKXCS010000001-JAKXCS010000046.
            DNA was extracted from a pure culture and then Nexterra libraries
            were prepared. To remove possible contamination, resulting
            sequences were binned using MetBAT2.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.032
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 73x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..46
                     /organism="Lactobacillus mulieris"
                     /mol_type="genomic DNA"
                     /strain="DZD_CM_20_S788-bin_1"
                     /isolation_source="ectocervical mucosa"
                     /host="Homo sapiens"
                     /db_xref="taxon:2508708"
                     /geo_loc_name="USA"
WGS         JAKXCS010000001-JAKXCS010000046
//
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