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GenBank: JAMFXE000000000.1
LOCUS JAMFXE010000000 32 rc DNA linear BCT 09-NOV-2022 DEFINITION Enterobacter hormaechei subsp. xiangfangensis strain HD2543, whole genome shotgun sequencing project. ACCESSION JAMFXE000000000 VERSION JAMFXE000000000.1 DBLINK BioProject: PRJNA824645 BioSample: SAMN27409699 KEYWORDS WGS. SOURCE Enterobacter hormaechei subsp. xiangfangensis (Enterobacter xiangfangensis) ORGANISM Enterobacter hormaechei subsp. xiangfangensis Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex. REFERENCE 1 (bases 1 to 32) AUTHORS Du,H. and Zhu,Z. TITLE Whole genome sequences of carbapenem-resistant Enterobacter strains from China JOURNAL Unpublished REFERENCE 2 (bases 1 to 32) AUTHORS Du,H. and Zhu,Z. TITLE Direct Submission JOURNAL Submitted (08-APR-2022) Department of Clinical Laboratory, The Second Affiliated Hospital of Soochow University, Xihuan, Suzhou 215004, China COMMENT The Enterobacter hormaechei subsp. xiangfangensis whole genome shotgun (WGS) project has the project accession JAMFXE000000000. This version of the project (01) has the accession number JAMFXE010000000, and consists of sequences JAMFXE010000001-JAMFXE010000032. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SPAdes v. 3.11 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100x Sequencing Technology :: Illumina NovaSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 05/16/2022 23:20:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.1 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 4,796 CDSs (total) :: 4,713 Genes (coding) :: 4,671 CDSs (with protein) :: 4,671 Genes (RNA) :: 83 rRNAs :: 1, 3, 5 (5S, 16S, 23S) complete rRNAs :: 1, 1 (5S, 16S) partial rRNAs :: 2, 5 (16S, 23S) tRNAs :: 69 ncRNAs :: 5 Pseudo Genes (total) :: 42 CDSs (without protein) :: 42 Pseudo Genes (ambiguous residues) :: 0 of 42 Pseudo Genes (frameshifted) :: 16 of 42 Pseudo Genes (incomplete) :: 23 of 42 Pseudo Genes (internal stop) :: 9 of 42 Pseudo Genes (multiple problems) :: 6 of 42 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..32 /organism="Enterobacter hormaechei subsp. xiangfangensis" /mol_type="genomic DNA" /strain="HD2543" /isolation_source="Urinary tract" /host="Homo sapiens" /sub_species="xiangfangensis" /db_xref="taxon:1296536" /geo_loc_name="China: Sichuan, Chengdu" /lat_lon="30.67 N 104.05 E" /collection_date="2017-07-11" /collected_by="Sichuan Provincial People's Hospital" WGS JAMFXE010000001-JAMFXE010000032 //
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