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MAG: Limosilactobacillus reuteri isolate MAG_ENV_CA_04, whole genome shotgun sequencing project

GenBank: JBHWTV000000000.1

  • This entry is the master record for a whole genome shotgun sequencing project and contains no sequence data.

LOCUS       JBHWTV010000000          161 rc    DNA     linear   ENV 18-OCT-2024
DEFINITION  MAG: Limosilactobacillus reuteri isolate MAG_ENV_CA_04, whole
            genome shotgun sequencing project.
ACCESSION   JBHWTV000000000
VERSION     JBHWTV000000000.1
DBLINK      BioProject: PRJNA987158
            BioSample: SAMN43765607
            Sequence Read Archive: SRR30645937, SRR30645936
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG.
SOURCE      Limosilactobacillus reuteri (air metagenome)
  ORGANISM  Limosilactobacillus reuteri
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Limosilactobacillus.
REFERENCE   1  (bases 1 to 161)
  AUTHORS   Slizovskiy,I.B., Gaire,T.N., Ferm,P.M., Odland,C.A., Dee,S.A.,
            Nerem,J., Bravo,J.E., Boucher,C. and Noyes,N.R.
  TITLE     Biosecurity interventions reduce exposure impacts on the skin
            microbiome of humans working in swine farms
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 161)
  AUTHORS   Ferm,P.M. and Slizovskiy,I.B.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-SEP-2024) Department of Veterinary Population
            Medicine, University of Minnesota, 1988 Fitch Avenue, AS/VM
            Building, Third Floor Mailbox, Saint Paul, MN 55108, USA
COMMENT     The Limosilactobacillus reuteri whole genome shotgun (WGS) project
            has the project accession JBHWTV000000000.  This version of the
            project (01) has the accession number JBHWTV010000000, and consists
            of sequences JBHWTV010000001-JBHWTV010000161.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 70.8439311908575x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..161
                     /organism="Limosilactobacillus reuteri"
                     /mol_type="genomic DNA"
                     /isolate="MAG_ENV_CA_04"
                     /isolation_source="EPIDERMAL PADDLE"
                     /db_xref="taxon:1598"
                     /environmental_sample
                     /geo_loc_name="USA: MN"
                     /collection_date="2021-06"
                     /metagenome_source="air metagenome"
                     /note="metagenomic"
WGS         JBHWTV010000001-JBHWTV010000161
//
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