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Caenorhabditis elegans Protein transport protein sec16 (sec-16A.2), partial mRNA

NCBI Reference Sequence: NM_001029386.5

FASTA Graphics 

LOCUS       NM_001029386            5230 bp    mRNA    linear   INV 04-DEC-2024
DEFINITION  Caenorhabditis elegans Protein transport protein sec16 (sec-16A.2),
            partial mRNA.
ACCESSION   NM_001029386
VERSION     NM_001029386.5
DBLINK      BioProject: PRJNA158
KEYWORDS    RefSeq.
SOURCE      Caenorhabditis elegans
  ORGANISM  Caenorhabditis elegans
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
            Caenorhabditis.
REFERENCE   1  (bases 1 to 5230)
  AUTHORS   Sulson,J.E. and Waterston,R.
  CONSRTM   Caenorhabditis elegans Sequencing Consortium
  TITLE     Genome sequence of the nematode C. elegans: a platform for
            investigating biology
  JOURNAL   Science 282 (5396), 2012-2018 (1998)
   PUBMED   9851916
  REMARK    Erratum:[Science 1999 Jan 1;283(5398):35]
REFERENCE   2  (bases 1 to 5230)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2024) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 5230)
  AUTHORS   WormBase.
  CONSRTM   WormBase Consortium
  TITLE     Direct Submission
  JOURNAL   Submitted (17-OCT-2024) WormBase Group, European Bioinformatics
            Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org
REFERENCE   4  (bases 1 to 5230)
  AUTHORS   Sulson,J.E. and Waterston,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-MAR-2003) Nematode Sequencing Project: Sanger
            Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute
            at Washington University, St. Louis, MO 63110, USA
COMMENT     REVIEWED REFSEQ: This record has been curated by WormBase. This
            record is derived from an annotated genomic sequence (NC_003284).
            
            On May 27, 2020 this sequence version replaced NM_001029386.4.
            COMPLETENESS: incomplete on the 5' end.
FEATURES             Location/Qualifiers
     source          1..5230
                     /organism="Caenorhabditis elegans"
                     /mol_type="mRNA"
                     /strain="Bristol N2"
                     /db_xref="taxon:6239"
                     /chromosome="X"
     gene            <1..5230
                     /gene="sec-16A.2"
                     /locus_tag="CELE_F13B9.1"
                     /db_xref="GeneID:181084"
                     /db_xref="WormBase:WBGene00017419"
     CDS             1..4830
                     /gene="sec-16A.2"
                     /locus_tag="CELE_F13B9.1"
                     /standard_name="F13B9.1c"
                     /note="Partially confirmed by transcript evidence"
                     /codon_start=1
                     /product="Protein transport protein sec16"
                     /protein_id="NP_001024557.1"
                     /db_xref="GeneID:181084"
                     /db_xref="WormBase:WBGene00017419"
                     /translation="MSFYWQQGLPNQQDTGQQSQQPAQQGQWDFINLGGAPAPQHQWN
                     PATQQQNNYYYHQQPAAPPQQHTNPQQPPQQQYNVPTNSHQTAEQNYQQQWAQQQYQN
                     QAQPQPPQQPSLSSQQIQHQPQLPKAKKAPKVQTNTQQQVQQNFNPTPPVLTTSQKPG
                     NTQQDYYYSQQQHTQQNVYQTNHVHPEETQVVAQALQPTAESTYFPPPPVQQVGSAPP
                     SKEVTPERHFTAAAPAPHVEQVALVPTPPTLAPKSQAPNTAKKAEHLTVTAPIAAETP
                     KTKVTPTSSEDDWEKADMEVQRVEDENKRQKAVPSTAVSEKPEESRESSSLGGSWSQQ
                     DTEPSERSSVEPEILEHPVKSESDKEEKTPRVSMSEFPNHETTPTIVTMSVSTNEDRQ
                     KTPEAGNLSQNTSIVLNTTDSPLEAIATSTPKEIKPEKRSSVSSQGTIGAEKTKAKKK
                     NKDEAVSSMFKRPDQFSENGEASGNNSDSTMASGRPDFERGHARASYREYKKTYKEII
                     DRLKMMRTDSHRPDFRPASKLANPLLAAAGLSRLHPAIRRESAGGRNDGRTSVPLHHS
                     HSFTEHMYHDQNGGRRSRVSRLDPNARPSSRQATGYQTANQSYNHYDQHNHSYQHQQM
                     QHRGRHSALGVPFDARRTPSSYIRTFSGEYGQEPQETSSISENEDDGDNVESDDELRG
                     FNMERQHERRGYNNAQYQEVQCPIEEDGSALYYCGVVHVNMDIWRRITQSYQIPAEFN
                     ELKPIEKAAYIFYAVIHKQPCRNLDTFRKQFNFYFYKYGMEGDSDDDALFKVCRTMQN
                     HYIERQREKERANQNMMSTLFSDDTSIDGQSDMNSVCEESLNAYDIYNNGPLKFTCPH
                     SFMNISTGGQIISIRPDQSISAVVFDDIKSVLKDVPTLQVKDAAMTFKGPLIPHQSAP
                     HTVRLYITKQIENIKNSAVAIENPEANDVVESLLIWQLLETMVKQQGNITGPDIAELL
                     AKVASQPVQIEAPPQQANIAPALTQFTKFLLGGHIDEAVESALRNGLFADALVLTRRL
                     FPNDERRIEQIESRFLQTRSMSNPVTTLVSVAKGESPPVLTNPPLDDHLSWGTHAAII
                     LANLDQRGPAMNTIYQLGRALAKRDYHSAADFCFLVCGVLGGTNPFEPIATPEGEEDY
                     RRHISLVNSDIPDNESNPKCQYGFLLTDLHATEIFDYALRLKADRESPLTKSVEYQTA
                     RIKYAKLLANHGFNTDAYRYCTEVARAIWNNLYLFKADDLLELCDLAESLQYAASVNP
                     SESQWIHDLRTTVQAGFVYTPQPTQTVKHLENKPVPSVHQGYDLQSNAQDDPEVPREP
                     VQHVPITQNVIDPVPTHSAFTPTIQPKDPELSHPPQNQVYREEPPHIPPTPTPSVHQE
                     QHYQQFDQSFSQSLTQQAQEDGFMTPPDYSDGPLTMASSPPTLPPVQSVPVSSKPAPP
                     SAENQAQNSTSPQQPTQEQGQETQDRNPDQGGWLKSIQSTVQNTVQKATGRNPMNLPE
                     DRNPSIVWDSTQNKYVGAGVEQEPVAPPPPMAQAGPAPPVGGGGLRAARASRYARVGG
                     TSSSASQAPAGMMAPAPPTANFGFIPAPVDNDNDSVDPFSGQANPTIMQSAPMSSDE"
ORIGIN      
        1 atgagcttct attggcaaca aggcctacca aatcaacaag acactggcca acaatcacag
       61 caaccagcac aacaaggaca atgggatttc ataaacctgg gaggagcacc ggcgccacaa
      121 catcagtgga atccagctac tcagcaacaa aataattatt actatcacca acaaccagca
      181 gccccaccgc agcagcatac taaccctcaa caacctccac agcaacaata caacgttccc
      241 actaacagcc accagactgc agagcagaac tatcaacagc aatgggcaca gcaacaatat
      301 caaaaccagg ctcaacctca gccacctcaa cagccttctc tttcaagcca gcaaatccaa
      361 catcagccac agttgccgaa agcaaaaaag gcaccaaaag ttcaaaccaa cacgcaacaa
      421 caagtgcaac agaatttcaa tccaacacct ccagtcttaa caacttccca gaaacctgga
      481 aatacacaac aggattacta ctattcccag cagcagcaca cacaacaaaa tgtctaccaa
      541 acaaatcatg ttcatcccga agaaactcaa gtagtcgctc aagcgctcca accgacagct
      601 gaatcgacct actttccacc accacctgtc cagcaagttg ggtcggcgcc accatcgaag
      661 gaagtaaccc ctgaacggca ctttacggca gcagcacccg cgccacatgt ggagcaagtg
      721 gctctagtac ccactcctcc aacactagcc cctaaaagtc aggctccaaa tacagcgaaa
      781 aaagcggagc atttgacagt tactgcccca attgctgcgg aaacgccaaa aacgaaagta
      841 accccaactt catcagaaga cgactgggaa aaggctgaca tggaagttca acgcgtggaa
      901 gatgagaaca aacgtcaaaa ggcagtgcca tctactgcgg tttcggaaaa gccagaagaa
      961 tcgcgagaat cttcgtccct tggcggatca tggtctcagc aggataccga accttcagag
     1021 cgaagttctg tcgagcctga aatcttggag cacccagtga aatctgaatc agataaagaa
     1081 gaaaaaactc ccagagtttc aatgtctgag tttccgaatc acgaaactac tccaacgata
     1141 gtgaccatgt ctgtgtctac taatgaagat cggcagaaaa ctccagaagc tggaaacctg
     1201 agtcagaaca cctcaattgt tctgaataca actgatagcc ctcttgaagc aattgccact
     1261 agtacaccta aggaaatcaa gccggaaaaa agatcatcag tgtcttctca aggaacaatt
     1321 ggcgcggaaa aaacaaaggc taaaaagaaa aacaaggatg aagccgtgtc atcaatgttc
     1381 aaaagacctg accagttctc tgaaaatggt gaggcctctg gaaataacag tgacagcacg
     1441 atggcttctg gtcggccaga ttttgaaaga ggacatgcaa gagccagtta tcgtgaatat
     1501 aagaagacgt acaaggagat aattgatcgc ttgaagatga tgagaacaga ttctcatcgc
     1561 cctgatttcc gcccagcttc gaaacttgca aatccacttt tggccgctgc cggactatca
     1621 cgtcttcatc cagcaattcg tcgagagtct gccggaggac gcaacgatgg gagaacttcg
     1681 gttcctcttc atcacagcca tagttttacg gagcatatgt atcacgatca gaatggtggt
     1741 cgcaggagtc gtgtgagccg acttgatcca aatgcccgcc cttcatctag acaggcaact
     1801 ggatatcaaa cagcaaatca aagctacaat cactatgacc aacataatca cagttatcag
     1861 catcagcaaa tgcagcaccg aggccgtcac agtgcattgg gagttccatt tgatgcgaga
     1921 cgaacgccat cttcgtatat tagaacgttt tctggagaat atggacaaga accacaagag
     1981 acctcaagca tatcagaaaa cgaggatgat ggagataatg tggaaagtga tgatgagctt
     2041 cgaggtttca acatggaacg acaacacgag cgacgaggat acaacaatgc tcagtatcaa
     2101 gaagtgcaat gcccaattga agaagatggc agcgctctgt actattgtgg agttgttcac
     2161 gtcaacatgg atatatggcg tcgaatcaca cagagctatc agatcccagc agagtttaat
     2221 gagctgaagc caattgagaa ggccgcgtac attttctacg cagttattca caaacagccg
     2281 tgtagaaatt tggatacttt ccgcaaacag ttcaatttct atttctataa gtacggaatg
     2341 gaaggagact ctgacgatga tgcacttttt aaggtgtgcc gaacaatgca aaatcactac
     2401 attgaacgac aaagagaaaa agaacgtgcc aatcaaaaca tgatgtcaac tttgttcagc
     2461 gatgatacca gcatcgatgg acaaagcgat atgaacagtg tctgcgaaga atctctcaat
     2521 gcttacgaca tttataacaa tggacctctc aaatttacat gcccccacag tttcatgaac
     2581 atctcaactg gaggacaaat tatttcaata cgccctgatc agtcgatttc tgctgttgtt
     2641 tttgatgata tcaaatctgt tctgaaagat gtcccaactt tgcaagtcaa agatgctgcg
     2701 atgacattca aagggccact tattccacat caatcggctc cacacactgt ccgcctttac
     2761 atcactaaac aaattgagaa cattaaaaat tccgcagtcg caattgaaaa tccggaggca
     2821 aatgatgtag tggagtcatt gctcatttgg caacttctcg aaactatggt taagcaacaa
     2881 ggaaacatca ctgggccaga tattgcggaa cttcttgcga aagtagccag tcaacctgta
     2941 caaattgaag ctccaccaca acaagcaaac atcgcccctg ctctaactca gtttacgaag
     3001 ttccttcttg gaggacatat tgatgaagcg gttgaaagtg ctcttcgcaa tgggctattt
     3061 gctgatgccc ttgttttgac tcgacgtctt ttcccgaacg atgagcgcag aatcgagcag
     3121 attgagagca gatttttgca gacaagatcg atgagcaacc cggttacaac gctagtgtcc
     3181 gtcgctaaag gagaatcccc accagttttg acaaatccgc cacttgacga tcatctcagc
     3241 tggggaacac atgctgccat aatcttggca aacttggatc aacgtggacc agcaatgaac
     3301 actatttacc aactgggccg agcacttgct aagagagatt atcacagtgc tgctgatttt
     3361 tgtttccttg tttgtggagt cttgggaggt acaaatccgt tcgaaccaat cgcaacaccg
     3421 gaaggcgagg aagattaccg acgccacatt tcactcgtta actctgatat tcccgataac
     3481 gagtctaatc caaaatgtca gtacggattc ttgctcacag atcttcacgc cacagaaatt
     3541 ttcgactatg cgttgcgatt aaaagccgat cgcgaatcac cattgacaaa gtctgtggag
     3601 tatcagactg cacgcatcaa atatgctaag ctcctggcta atcatggatt caacactgac
     3661 gcctacagat actgcacaga agttgctcga gccatctgga acaatttgta tctgtttaaa
     3721 gcagacgacc ttttggaatt gtgtgatttg gctgaatcat tgcaatatgc agcttcagtt
     3781 aatccatccg aatcgcaatg gattcatgac ttgagaacca ctgttcaagc tggttttgtc
     3841 tatacgcctc aaccaacaca aactgtaaaa cacttggaaa ataagccagt tcccagtgtt
     3901 caccaaggtt atgacctgca aagcaatgca caagacgatc cagaagttcc aagagagcca
     3961 gtccaacacg ttccaatcac acaaaatgtt atcgatcccg ttccgactca ctcggcgttc
     4021 actccaacta ttcaaccaaa ggacccggag ctctcacatc caccccaaaa ccaagtttat
     4081 cgtgaagaac ctcctcacat cccgccaacg ccaacgccat cagttcatca agagcaacac
     4141 tatcagcagt ttgaccaatc gttctcacaa agcctgactc aacaggccca agaagatgga
     4201 ttcatgacac ccccggatta cagcgatgga cctctcacaa tggcatcatc accccccaca
     4261 ctgccacctg tgcaatctgt tccagtatcg tctaagcctg cgcctccatc ggctgaaaat
     4321 caggctcaga attctacgtc tccccagcaa ccaacacaag aacaaggaca agaaacccaa
     4381 gatagaaatc cggatcaagg gggatggctg aaatcaattc aaagcaccgt tcaaaacacc
     4441 gttcaaaaag cgaccgggag gaatccaatg aatcttccag aagaccgaaa tccgtcaatt
     4501 gtgtgggata gtactcaaaa caaatatgtc ggagctggag tagagcaaga accagttgct
     4561 ccgcctccac caatggccca ggctggacct gctccgccag tggggggagg tggattaaga
     4621 gctgctagag cttctcgcta tgccagagtt ggaggcacat cgtcgtctgc ttcgcaagct
     4681 cccgctggaa tgatggctcc ggcaccacca acagcgaatt ttggattcat tcctgctcca
     4741 gttgacaatg ataatgattc cgttgatcca ttcagtggtc aagccaaccc aactataatg
     4801 cagtctgctc caatgtcgtc tgatgaataa tagtaaacaa ttttgttgtt ttaagatgtt
     4861 tacaccaaat gctccatttc cggccttgtg atagtgtcac ttttactttg tttccctttg
     4921 attttcatca aattttattt ttttgagacc tttactgcta ttgggatggg tttgtttttt
     4981 aacgatcaat ttttcaacgc caacatgtat tgtttcatca ttgataatta ttctattcgt
     5041 gatgggtttt cctcgaattt ctattattta tcttttggtg gaggatacgg aagtgtagat
     5101 tactttctaa gtcaacccta tattgttgtg agtacacaca cctacgccag atttgtttta
     5161 tatttatttt cttttcaaaa acggtttctt tggtgtagtc agtagtaaat gaaatatcta
     5221 tttttgcaaa
//
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Reference sequence information

  • RefSeq protein product
    See the reference protein sequence for Protein transport protein sec16 (NP_001024557.1).

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