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NCBI Reference Sequence: NM_001029386.5
FASTA Graphics
LOCUS NM_001029386 5230 bp mRNA linear INV 04-DEC-2024 DEFINITION Caenorhabditis elegans Protein transport protein sec16 (sec-16A.2), partial mRNA. ACCESSION NM_001029386 VERSION NM_001029386.5 DBLINK BioProject: PRJNA158 KEYWORDS RefSeq. SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 5230) AUTHORS Sulson,J.E. and Waterston,R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282 (5396), 2012-2018 (1998) PUBMED 9851916 REMARK Erratum:[Science 1999 Jan 1;283(5398):35] REFERENCE 2 (bases 1 to 5230) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (04-DEC-2024) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 5230) AUTHORS WormBase. CONSRTM WormBase Consortium TITLE Direct Submission JOURNAL Submitted (17-OCT-2024) WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 4 (bases 1 to 5230) AUTHORS Sulson,J.E. and Waterston,R. TITLE Direct Submission JOURNAL Submitted (03-MAR-2003) Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA COMMENT REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003284). On May 27, 2020 this sequence version replaced NM_001029386.4. COMPLETENESS: incomplete on the 5' end. FEATURES Location/Qualifiers source 1..5230 /organism="Caenorhabditis elegans" /mol_type="mRNA" /strain="Bristol N2" /db_xref="taxon:6239" /chromosome="X" gene <1..5230 /gene="sec-16A.2" /locus_tag="CELE_F13B9.1" /db_xref="GeneID:181084" /db_xref="WormBase:WBGene00017419" CDS 1..4830 /gene="sec-16A.2" /locus_tag="CELE_F13B9.1" /standard_name="F13B9.1c" /note="Partially confirmed by transcript evidence" /codon_start=1 /product="Protein transport protein sec16" /protein_id="NP_001024557.1" /db_xref="GeneID:181084" /db_xref="WormBase:WBGene00017419" /translation="MSFYWQQGLPNQQDTGQQSQQPAQQGQWDFINLGGAPAPQHQWN PATQQQNNYYYHQQPAAPPQQHTNPQQPPQQQYNVPTNSHQTAEQNYQQQWAQQQYQN QAQPQPPQQPSLSSQQIQHQPQLPKAKKAPKVQTNTQQQVQQNFNPTPPVLTTSQKPG NTQQDYYYSQQQHTQQNVYQTNHVHPEETQVVAQALQPTAESTYFPPPPVQQVGSAPP SKEVTPERHFTAAAPAPHVEQVALVPTPPTLAPKSQAPNTAKKAEHLTVTAPIAAETP KTKVTPTSSEDDWEKADMEVQRVEDENKRQKAVPSTAVSEKPEESRESSSLGGSWSQQ DTEPSERSSVEPEILEHPVKSESDKEEKTPRVSMSEFPNHETTPTIVTMSVSTNEDRQ KTPEAGNLSQNTSIVLNTTDSPLEAIATSTPKEIKPEKRSSVSSQGTIGAEKTKAKKK NKDEAVSSMFKRPDQFSENGEASGNNSDSTMASGRPDFERGHARASYREYKKTYKEII DRLKMMRTDSHRPDFRPASKLANPLLAAAGLSRLHPAIRRESAGGRNDGRTSVPLHHS HSFTEHMYHDQNGGRRSRVSRLDPNARPSSRQATGYQTANQSYNHYDQHNHSYQHQQM QHRGRHSALGVPFDARRTPSSYIRTFSGEYGQEPQETSSISENEDDGDNVESDDELRG FNMERQHERRGYNNAQYQEVQCPIEEDGSALYYCGVVHVNMDIWRRITQSYQIPAEFN ELKPIEKAAYIFYAVIHKQPCRNLDTFRKQFNFYFYKYGMEGDSDDDALFKVCRTMQN HYIERQREKERANQNMMSTLFSDDTSIDGQSDMNSVCEESLNAYDIYNNGPLKFTCPH SFMNISTGGQIISIRPDQSISAVVFDDIKSVLKDVPTLQVKDAAMTFKGPLIPHQSAP HTVRLYITKQIENIKNSAVAIENPEANDVVESLLIWQLLETMVKQQGNITGPDIAELL AKVASQPVQIEAPPQQANIAPALTQFTKFLLGGHIDEAVESALRNGLFADALVLTRRL FPNDERRIEQIESRFLQTRSMSNPVTTLVSVAKGESPPVLTNPPLDDHLSWGTHAAII LANLDQRGPAMNTIYQLGRALAKRDYHSAADFCFLVCGVLGGTNPFEPIATPEGEEDY RRHISLVNSDIPDNESNPKCQYGFLLTDLHATEIFDYALRLKADRESPLTKSVEYQTA RIKYAKLLANHGFNTDAYRYCTEVARAIWNNLYLFKADDLLELCDLAESLQYAASVNP SESQWIHDLRTTVQAGFVYTPQPTQTVKHLENKPVPSVHQGYDLQSNAQDDPEVPREP VQHVPITQNVIDPVPTHSAFTPTIQPKDPELSHPPQNQVYREEPPHIPPTPTPSVHQE QHYQQFDQSFSQSLTQQAQEDGFMTPPDYSDGPLTMASSPPTLPPVQSVPVSSKPAPP SAENQAQNSTSPQQPTQEQGQETQDRNPDQGGWLKSIQSTVQNTVQKATGRNPMNLPE DRNPSIVWDSTQNKYVGAGVEQEPVAPPPPMAQAGPAPPVGGGGLRAARASRYARVGG TSSSASQAPAGMMAPAPPTANFGFIPAPVDNDNDSVDPFSGQANPTIMQSAPMSSDE" ORIGIN 1 atgagcttct attggcaaca aggcctacca aatcaacaag acactggcca acaatcacag 61 caaccagcac aacaaggaca atgggatttc ataaacctgg gaggagcacc ggcgccacaa 121 catcagtgga atccagctac tcagcaacaa aataattatt actatcacca acaaccagca 181 gccccaccgc agcagcatac taaccctcaa caacctccac agcaacaata caacgttccc 241 actaacagcc accagactgc agagcagaac tatcaacagc aatgggcaca gcaacaatat 301 caaaaccagg ctcaacctca gccacctcaa cagccttctc tttcaagcca gcaaatccaa 361 catcagccac agttgccgaa agcaaaaaag gcaccaaaag ttcaaaccaa cacgcaacaa 421 caagtgcaac agaatttcaa tccaacacct ccagtcttaa caacttccca gaaacctgga 481 aatacacaac aggattacta ctattcccag cagcagcaca cacaacaaaa tgtctaccaa 541 acaaatcatg ttcatcccga agaaactcaa gtagtcgctc aagcgctcca accgacagct 601 gaatcgacct actttccacc accacctgtc cagcaagttg ggtcggcgcc accatcgaag 661 gaagtaaccc ctgaacggca ctttacggca gcagcacccg cgccacatgt ggagcaagtg 721 gctctagtac ccactcctcc aacactagcc cctaaaagtc aggctccaaa tacagcgaaa 781 aaagcggagc atttgacagt tactgcccca attgctgcgg aaacgccaaa aacgaaagta 841 accccaactt catcagaaga cgactgggaa aaggctgaca tggaagttca acgcgtggaa 901 gatgagaaca aacgtcaaaa ggcagtgcca tctactgcgg tttcggaaaa gccagaagaa 961 tcgcgagaat cttcgtccct tggcggatca tggtctcagc aggataccga accttcagag 1021 cgaagttctg tcgagcctga aatcttggag cacccagtga aatctgaatc agataaagaa 1081 gaaaaaactc ccagagtttc aatgtctgag tttccgaatc acgaaactac tccaacgata 1141 gtgaccatgt ctgtgtctac taatgaagat cggcagaaaa ctccagaagc tggaaacctg 1201 agtcagaaca cctcaattgt tctgaataca actgatagcc ctcttgaagc aattgccact 1261 agtacaccta aggaaatcaa gccggaaaaa agatcatcag tgtcttctca aggaacaatt 1321 ggcgcggaaa aaacaaaggc taaaaagaaa aacaaggatg aagccgtgtc atcaatgttc 1381 aaaagacctg accagttctc tgaaaatggt gaggcctctg gaaataacag tgacagcacg 1441 atggcttctg gtcggccaga ttttgaaaga ggacatgcaa gagccagtta tcgtgaatat 1501 aagaagacgt acaaggagat aattgatcgc ttgaagatga tgagaacaga ttctcatcgc 1561 cctgatttcc gcccagcttc gaaacttgca aatccacttt tggccgctgc cggactatca 1621 cgtcttcatc cagcaattcg tcgagagtct gccggaggac gcaacgatgg gagaacttcg 1681 gttcctcttc atcacagcca tagttttacg gagcatatgt atcacgatca gaatggtggt 1741 cgcaggagtc gtgtgagccg acttgatcca aatgcccgcc cttcatctag acaggcaact 1801 ggatatcaaa cagcaaatca aagctacaat cactatgacc aacataatca cagttatcag 1861 catcagcaaa tgcagcaccg aggccgtcac agtgcattgg gagttccatt tgatgcgaga 1921 cgaacgccat cttcgtatat tagaacgttt tctggagaat atggacaaga accacaagag 1981 acctcaagca tatcagaaaa cgaggatgat ggagataatg tggaaagtga tgatgagctt 2041 cgaggtttca acatggaacg acaacacgag cgacgaggat acaacaatgc tcagtatcaa 2101 gaagtgcaat gcccaattga agaagatggc agcgctctgt actattgtgg agttgttcac 2161 gtcaacatgg atatatggcg tcgaatcaca cagagctatc agatcccagc agagtttaat 2221 gagctgaagc caattgagaa ggccgcgtac attttctacg cagttattca caaacagccg 2281 tgtagaaatt tggatacttt ccgcaaacag ttcaatttct atttctataa gtacggaatg 2341 gaaggagact ctgacgatga tgcacttttt aaggtgtgcc gaacaatgca aaatcactac 2401 attgaacgac aaagagaaaa agaacgtgcc aatcaaaaca tgatgtcaac tttgttcagc 2461 gatgatacca gcatcgatgg acaaagcgat atgaacagtg tctgcgaaga atctctcaat 2521 gcttacgaca tttataacaa tggacctctc aaatttacat gcccccacag tttcatgaac 2581 atctcaactg gaggacaaat tatttcaata cgccctgatc agtcgatttc tgctgttgtt 2641 tttgatgata tcaaatctgt tctgaaagat gtcccaactt tgcaagtcaa agatgctgcg 2701 atgacattca aagggccact tattccacat caatcggctc cacacactgt ccgcctttac 2761 atcactaaac aaattgagaa cattaaaaat tccgcagtcg caattgaaaa tccggaggca 2821 aatgatgtag tggagtcatt gctcatttgg caacttctcg aaactatggt taagcaacaa 2881 ggaaacatca ctgggccaga tattgcggaa cttcttgcga aagtagccag tcaacctgta 2941 caaattgaag ctccaccaca acaagcaaac atcgcccctg ctctaactca gtttacgaag 3001 ttccttcttg gaggacatat tgatgaagcg gttgaaagtg ctcttcgcaa tgggctattt 3061 gctgatgccc ttgttttgac tcgacgtctt ttcccgaacg atgagcgcag aatcgagcag 3121 attgagagca gatttttgca gacaagatcg atgagcaacc cggttacaac gctagtgtcc 3181 gtcgctaaag gagaatcccc accagttttg acaaatccgc cacttgacga tcatctcagc 3241 tggggaacac atgctgccat aatcttggca aacttggatc aacgtggacc agcaatgaac 3301 actatttacc aactgggccg agcacttgct aagagagatt atcacagtgc tgctgatttt 3361 tgtttccttg tttgtggagt cttgggaggt acaaatccgt tcgaaccaat cgcaacaccg 3421 gaaggcgagg aagattaccg acgccacatt tcactcgtta actctgatat tcccgataac 3481 gagtctaatc caaaatgtca gtacggattc ttgctcacag atcttcacgc cacagaaatt 3541 ttcgactatg cgttgcgatt aaaagccgat cgcgaatcac cattgacaaa gtctgtggag 3601 tatcagactg cacgcatcaa atatgctaag ctcctggcta atcatggatt caacactgac 3661 gcctacagat actgcacaga agttgctcga gccatctgga acaatttgta tctgtttaaa 3721 gcagacgacc ttttggaatt gtgtgatttg gctgaatcat tgcaatatgc agcttcagtt 3781 aatccatccg aatcgcaatg gattcatgac ttgagaacca ctgttcaagc tggttttgtc 3841 tatacgcctc aaccaacaca aactgtaaaa cacttggaaa ataagccagt tcccagtgtt 3901 caccaaggtt atgacctgca aagcaatgca caagacgatc cagaagttcc aagagagcca 3961 gtccaacacg ttccaatcac acaaaatgtt atcgatcccg ttccgactca ctcggcgttc 4021 actccaacta ttcaaccaaa ggacccggag ctctcacatc caccccaaaa ccaagtttat 4081 cgtgaagaac ctcctcacat cccgccaacg ccaacgccat cagttcatca agagcaacac 4141 tatcagcagt ttgaccaatc gttctcacaa agcctgactc aacaggccca agaagatgga 4201 ttcatgacac ccccggatta cagcgatgga cctctcacaa tggcatcatc accccccaca 4261 ctgccacctg tgcaatctgt tccagtatcg tctaagcctg cgcctccatc ggctgaaaat 4321 caggctcaga attctacgtc tccccagcaa ccaacacaag aacaaggaca agaaacccaa 4381 gatagaaatc cggatcaagg gggatggctg aaatcaattc aaagcaccgt tcaaaacacc 4441 gttcaaaaag cgaccgggag gaatccaatg aatcttccag aagaccgaaa tccgtcaatt 4501 gtgtgggata gtactcaaaa caaatatgtc ggagctggag tagagcaaga accagttgct 4561 ccgcctccac caatggccca ggctggacct gctccgccag tggggggagg tggattaaga 4621 gctgctagag cttctcgcta tgccagagtt ggaggcacat cgtcgtctgc ttcgcaagct 4681 cccgctggaa tgatggctcc ggcaccacca acagcgaatt ttggattcat tcctgctcca 4741 gttgacaatg ataatgattc cgttgatcca ttcagtggtc aagccaaccc aactataatg 4801 cagtctgctc caatgtcgtc tgatgaataa tagtaaacaa ttttgttgtt ttaagatgtt 4861 tacaccaaat gctccatttc cggccttgtg atagtgtcac ttttactttg tttccctttg 4921 attttcatca aattttattt ttttgagacc tttactgcta ttgggatggg tttgtttttt 4981 aacgatcaat ttttcaacgc caacatgtat tgtttcatca ttgataatta ttctattcgt 5041 gatgggtttt cctcgaattt ctattattta tcttttggtg gaggatacgg aagtgtagat 5101 tactttctaa gtcaacccta tattgttgtg agtacacaca cctacgccag atttgtttta 5161 tatttatttt cttttcaaaa acggtttctt tggtgtagtc agtagtaaat gaaatatcta 5221 tttttgcaaa //
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