LOCUS NM_001179980 2127 bp mRNA linear PLN 17-DEC-2024
DEFINITION Saccharomyces cerevisiae S288C glycogen (starch) synthase GSY1
(GSY1), partial mRNA.
ACCESSION NM_001179980
VERSION NM_001179980.1
DBLINK BioProject: PRJNA128
KEYWORDS RefSeq.
SOURCE Saccharomyces cerevisiae S288C
ORGANISM Saccharomyces cerevisiae S288C
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina;
Saccharomycetes; Saccharomycetales; Saccharomycetaceae;
Saccharomyces.
REFERENCE 1 (bases 1 to 2127)
AUTHORS Engel,S.R., Wong,E.D., Nash,R.S., Aleksander,S., Alexander,M.,
Douglass,E., Karra,K., Miyasato,S.R., Simison,M., Skrzypek,M.S.,
Weng,S. and Cherry,J.M.
TITLE New data and collaborations at the Saccharomyces Genome Database:
updated reference genome, alleles, and the Alliance of Genome
Resources
JOURNAL Genetics 220 (4) (2022)
PUBMED 34897464
REFERENCE 2 (bases 1 to 2127)
AUTHORS Goffeau,A., Barrell,B.G., Bussey,H., Davis,R.W., Dujon,B.,
Feldmann,H., Galibert,F., Hoheisel,J.D., Jacq,C., Johnston,M.,
Louis,E.J., Mewes,H.W., Murakami,Y., Philippsen,P., Tettelin,H. and
Oliver,S.G.
TITLE Life with 6000 genes
JOURNAL Science 274 (5287), 546 (1996)
PUBMED 8849441
REFERENCE 3 (bases 1 to 2127)
AUTHORS Murakami,Y., Naitou,M., Hagiwara,H., Shibata,T., Ozawa,M.,
Sasanuma,S., Sasanuma,M., Tsuchiya,Y., Soeda,E., Yokoyama,K. et al.
TITLE Analysis of the nucleotide sequence of chromosome VI from
Saccharomyces cerevisiae
JOURNAL Nat. Genet. 10 (3), 261-268 (1995)
PUBMED 7670463
REFERENCE 4 (bases 1 to 2127)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (17-DEC-2024) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 5 (bases 1 to 2127)
CONSRTM Saccharomyces Genome Database
TITLE Direct Submission
JOURNAL Submitted (16-JAN-2015) Department of Genetics, Stanford
University, Stanford, CA 94305-5120, USA
REMARK Protein update by submitter
REFERENCE 6 (bases 1 to 2127)
CONSRTM Saccharomyces Genome Database
TITLE Direct Submission
JOURNAL Submitted (04-MAY-2012) Department of Genetics, Stanford
University, Stanford, CA 94305-5120, USA
REMARK Protein update by submitter
REFERENCE 7 (bases 1 to 2127)
CONSRTM Saccharomyces Genome Database
TITLE Direct Submission
JOURNAL Submitted (31-MAR-2011) Department of Genetics, Stanford
University, Stanford, CA 94305-5120, USA
REMARK Sequence update by submitter
REFERENCE 8 (bases 1 to 2127)
CONSRTM Saccharomyces Genome Database
TITLE Direct Submission
JOURNAL Submitted (11-DEC-2009) Department of Genetics, Stanford
University, Stanford, CA 94305-5120, USA
COMMENT REVIEWED REFSEQ: This record has been curated by SGD. This record
is derived from an annotated genomic sequence (NC_001138).
##Genome-Annotation-Data-START##
Annotation Provider :: SGD
Annotation Status :: Full Annotation
Annotation Version :: R64-4-1
URL :: http://www.yeastgenome.org/
##Genome-Annotation-Data-END##
COMPLETENESS: incomplete on both ends.
FEATURES Location/Qualifiers
source 1..2127
/organism="Saccharomyces cerevisiae S288C"
/mol_type="mRNA"
/strain="S288C"
/db_xref="taxon:559292"
/chromosome="VI"
gene <1..>2127
/gene="GSY1"
/locus_tag="YFR015C"
/db_xref="GeneID:850569"
CDS 1..2127
/gene="GSY1"
/locus_tag="YFR015C"
/EC_number="2.4.1.11"
/experiment="EXISTENCE:direct assay:GO:0004373
alpha-1,4-glucan glucosyltransferase (UDP-glucose donor)
activity [PMID:2123485]"
/experiment="EXISTENCE:direct assay:GO:0005737 cytoplasm
[PMID:22842922|PMID:14562095]"
/experiment="EXISTENCE:direct assay:GO:0005739
mitochondrion [PMID:16823961|PMID:14576278]"
/experiment="EXISTENCE:mutant phenotype:GO:0005978
glycogen biosynthetic process [PMID:1908457]"
/note="Glycogen synthase; expression induced by glucose
limitation, nitrogen starvation, environmental stress, and
entry into stationary phase; GSY1 has a paralog, GSY2,
that arose from the whole genome duplication; relocalizes
from nucleus to cytoplasmic foci upon DNA replication
stress"
/codon_start=1
/product="glycogen (starch) synthase GSY1"
/protein_id="NP_116670.1"
/db_xref="GeneID:850569"
/db_xref="SGD:S000001911"
/translation="MARDLQNHLLFEVATEVTNRVGGIYSVLKSKAPVTVAQYGDNYT
LLGPLNKATYESEVEKLDWEDESIFPEELLPIQKTLMSMREKGVNFVYGNWLIEGAPR
VILFELDSVRHFLNEWKADLWSLVGIPSPEHDHETNDAILLGYVVVWFLGEVSKLDSS
HAIIGHFHEWLAGVALPLCRKKRIDVVTIFTTHATLLGRYLCAAGDVDFYNNLQYFDV
DQEAGKRGIYHRYCIERAAAHTADVFTTVSQITALEAEHLLKRKPDGILPNGLNVVKF
QAVHEFQNLHALKKDKINDFVRGHFHGCFDFDLDNTVYFFIAGRYEYKNKGADMFIES
LARLNYRLKVSGSKKTVVAFLIMPAKTNSFTVEALKSQAIVKSLENTVNEVTASIGKR
IFEHTMRYPHNGLESELPTNLDELLKSSEKVLLKKRVLALRRPYGELPPVVTHNMCDD
ANDPILNQIRHVRLFNDSSDRVKVIFHPEFLNANNPILGLDYDEFVRGCHLGVFPSYY
EPWGYTPAECTVMGVPSITTNVSGFGAYMEDLIETDQAKDYGIYIVDRRFKSPDESVE
QLADYMEEFVNKTRRQRINQRNRTERLSDLLDWKRMGLEYVKARQLGLRRAYPEQFKQ
LVGETISDANMNTLAGGKKFKIARPLSVPGSPKVRSNSTVYMTPGDLGTLQDANNADD
YFNLSTNGAIDNDDDDNDTSAYYEDN"
ORIGIN
1 atggctcgtg acttacaaaa tcatctactg ttcgaagtag caacagaagt aactaacagg
61 gttggtggta tttactctgt cttgaagtcc aaggctccag tcactgtggc acaatacgga
121 gacaactata cgctgcttgg acctttgaac aaggcgactt atgaaagtga ggttgaaaaa
181 cttgactggg aagatgaaag tatctttcct gaagagctgt taccgatcca aaaaactttg
241 atgtccatgc gggaaaaggg tgtgaacttt gtctacggta actggttgat tgagggagca
301 ccacgtgtca ttttatttga gctggattct gtaagacact ttttgaacga atggaaggct
361 gacctatggt ctctcgtcgg aattccatca ccagagcatg atcacgaaac aaacgatgcc
421 atattgttgg gttatgttgt tgtgtggttt ttgggagaag tttcaaaact ggacagtagc
481 catgccatca ttggccattt ccatgaatgg ctagctggtg tagccctgcc attgtgtaga
541 aagaaaagaa ttgatgttgt aacgattttc accacgcacg caactttatt gggtagatac
601 ttgtgtgccg ctggtgatgt agatttttat aacaatctac agtattttga tgtggaccaa
661 gaagctggta agagaggcat atatcatagg tactgcattg agcgcgctgc ggctcatact
721 gccgatgttt ttacgactgt gtcgcaaatc actgcattag aagcggagca tttgttgaag
781 aggaaaccgg atggcatttt gcccaatggt ttgaacgttg ttaagtttca agcagtacat
841 gaatttcaaa atctgcatgc cctgaaaaag gacaaaatta atgatttcgt cagaggccat
901 ttccatggtt gttttgattt cgatctagac aacacagttt atttctttat cgctggtaga
961 tatgaataca aaaacaaagg tgctgacatg ttcattgaat cattggctcg tctcaattac
1021 agattgaagg tttctggatc caagaagacg gtggtagcgt ttttgatcat gcctgccaaa
1081 accaattcct tcactgtgga ggcactgaaa agccaagcca ttgtaaaatc tttggaaaat
1141 actgttaatg aggtcaccgc atccattggg aagagaattt tcgagcatac gatgagatac
1201 cctcataatg gcctagaatc agagttgccc actaatttag atgagctgtt gaagagttct
1261 gaaaaggttt tgctgaagaa aagggtattg gcgctgagaa gaccttacgg ggaattgcct
1321 ccggtagtca cacataacat gtgcgatgat gctaacgatc caattttaaa ccaaattaga
1381 catgttagat tattcaatga ttcgagtgat cgtgtaaaag tgattttcca tcctgaattc
1441 ttaaacgcca ataaccctat ccttggtttg gattatgacg agtttgttcg cggctgtcac
1501 ttgggtgttt ttccatccta ttacgaacca tgggggtaca cgccagcaga atgtaccgtc
1561 atgggtgtcc catctatcac aacaaacgtt tctgggttcg gtgcctacat ggaagacttg
1621 attgaaacag accaagcgaa agactatggt atttatattg tagaccgtcg tttcaagagc
1681 cctgatgaat ctgtcgagca attagcagac tacatggaag agtttgtaaa caagaccaga
1741 agacaaagaa tcaaccaaag aaacagaacc gaaagactat cagacttgtt agattggaag
1801 agaatggggt tggaatacgt taaggctaga cagttgggtc ttcgtagggc ctatccagag
1861 cagttcaagc aactggtggg tgaaacaatt agtgacgcca atatgaatac tcttgccggt
1921 ggcaagaaat tcaagattgc caggcctttg agtgtacccg gatcccccaa agtaaggtcc
1981 aatagtactg tttacatgac tccgggcgat ttaggtaccc ttcaagatgc taataatgca
2041 gatgactatt ttaatttgag cacgaatgga gccatcgaca atgacgatga tgacaacgat
2101 acgtctgcat actacgagga taattaa
//