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Saccharomyces cerevisiae S288C glycogen (starch) synthase GSY1 (GSY1), partial mRNA

NCBI Reference Sequence: NM_001179980.1

FASTA Graphics 

LOCUS       NM_001179980            2127 bp    mRNA    linear   PLN 17-DEC-2024
DEFINITION  Saccharomyces cerevisiae S288C glycogen (starch) synthase GSY1
            (GSY1), partial mRNA.
ACCESSION   NM_001179980
VERSION     NM_001179980.1
DBLINK      BioProject: PRJNA128
KEYWORDS    RefSeq.
SOURCE      Saccharomyces cerevisiae S288C
  ORGANISM  Saccharomyces cerevisiae S288C
            Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina;
            Saccharomycetes; Saccharomycetales; Saccharomycetaceae;
            Saccharomyces.
REFERENCE   1  (bases 1 to 2127)
  AUTHORS   Engel,S.R., Wong,E.D., Nash,R.S., Aleksander,S., Alexander,M.,
            Douglass,E., Karra,K., Miyasato,S.R., Simison,M., Skrzypek,M.S.,
            Weng,S. and Cherry,J.M.
  TITLE     New data and collaborations at the Saccharomyces Genome Database:
            updated reference genome, alleles, and the Alliance of Genome
            Resources
  JOURNAL   Genetics 220 (4) (2022)
   PUBMED   34897464
REFERENCE   2  (bases 1 to 2127)
  AUTHORS   Goffeau,A., Barrell,B.G., Bussey,H., Davis,R.W., Dujon,B.,
            Feldmann,H., Galibert,F., Hoheisel,J.D., Jacq,C., Johnston,M.,
            Louis,E.J., Mewes,H.W., Murakami,Y., Philippsen,P., Tettelin,H. and
            Oliver,S.G.
  TITLE     Life with 6000 genes
  JOURNAL   Science 274 (5287), 546 (1996)
   PUBMED   8849441
REFERENCE   3  (bases 1 to 2127)
  AUTHORS   Murakami,Y., Naitou,M., Hagiwara,H., Shibata,T., Ozawa,M.,
            Sasanuma,S., Sasanuma,M., Tsuchiya,Y., Soeda,E., Yokoyama,K. et al.
  TITLE     Analysis of the nucleotide sequence of chromosome VI from
            Saccharomyces cerevisiae
  JOURNAL   Nat. Genet. 10 (3), 261-268 (1995)
   PUBMED   7670463
REFERENCE   4  (bases 1 to 2127)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (17-DEC-2024) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   5  (bases 1 to 2127)
  CONSRTM   Saccharomyces Genome Database
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JAN-2015) Department of Genetics, Stanford
            University, Stanford, CA 94305-5120, USA
  REMARK    Protein update by submitter
REFERENCE   6  (bases 1 to 2127)
  CONSRTM   Saccharomyces Genome Database
  TITLE     Direct Submission
  JOURNAL   Submitted (04-MAY-2012) Department of Genetics, Stanford
            University, Stanford, CA 94305-5120, USA
  REMARK    Protein update by submitter
REFERENCE   7  (bases 1 to 2127)
  CONSRTM   Saccharomyces Genome Database
  TITLE     Direct Submission
  JOURNAL   Submitted (31-MAR-2011) Department of Genetics, Stanford
            University, Stanford, CA 94305-5120, USA
  REMARK    Sequence update by submitter
REFERENCE   8  (bases 1 to 2127)
  CONSRTM   Saccharomyces Genome Database
  TITLE     Direct Submission
  JOURNAL   Submitted (11-DEC-2009) Department of Genetics, Stanford
            University, Stanford, CA 94305-5120, USA
COMMENT     REVIEWED REFSEQ: This record has been curated by SGD. This record
            is derived from an annotated genomic sequence (NC_001138).
            
            ##Genome-Annotation-Data-START##
            Annotation Provider :: SGD
            Annotation Status   :: Full Annotation
            Annotation Version  :: R64-4-1
            URL                 :: http://www.yeastgenome.org/
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..2127
                     /organism="Saccharomyces cerevisiae S288C"
                     /mol_type="mRNA"
                     /strain="S288C"
                     /db_xref="taxon:559292"
                     /chromosome="VI"
     gene            <1..>2127
                     /gene="GSY1"
                     /locus_tag="YFR015C"
                     /db_xref="GeneID:850569"
     CDS             1..2127
                     /gene="GSY1"
                     /locus_tag="YFR015C"
                     /EC_number="2.4.1.11"
                     /experiment="EXISTENCE:direct assay:GO:0004373
                     alpha-1,4-glucan glucosyltransferase (UDP-glucose donor)
                     activity [PMID:2123485]"
                     /experiment="EXISTENCE:direct assay:GO:0005737 cytoplasm
                     [PMID:22842922|PMID:14562095]"
                     /experiment="EXISTENCE:direct assay:GO:0005739
                     mitochondrion [PMID:16823961|PMID:14576278]"
                     /experiment="EXISTENCE:mutant phenotype:GO:0005978
                     glycogen biosynthetic process [PMID:1908457]"
                     /note="Glycogen synthase; expression induced by glucose
                     limitation, nitrogen starvation, environmental stress, and
                     entry into stationary phase; GSY1 has a paralog, GSY2,
                     that arose from the whole genome duplication; relocalizes
                     from nucleus to cytoplasmic foci upon DNA replication
                     stress"
                     /codon_start=1
                     /product="glycogen (starch) synthase GSY1"
                     /protein_id="NP_116670.1"
                     /db_xref="GeneID:850569"
                     /db_xref="SGD:S000001911"
                     /translation="MARDLQNHLLFEVATEVTNRVGGIYSVLKSKAPVTVAQYGDNYT
                     LLGPLNKATYESEVEKLDWEDESIFPEELLPIQKTLMSMREKGVNFVYGNWLIEGAPR
                     VILFELDSVRHFLNEWKADLWSLVGIPSPEHDHETNDAILLGYVVVWFLGEVSKLDSS
                     HAIIGHFHEWLAGVALPLCRKKRIDVVTIFTTHATLLGRYLCAAGDVDFYNNLQYFDV
                     DQEAGKRGIYHRYCIERAAAHTADVFTTVSQITALEAEHLLKRKPDGILPNGLNVVKF
                     QAVHEFQNLHALKKDKINDFVRGHFHGCFDFDLDNTVYFFIAGRYEYKNKGADMFIES
                     LARLNYRLKVSGSKKTVVAFLIMPAKTNSFTVEALKSQAIVKSLENTVNEVTASIGKR
                     IFEHTMRYPHNGLESELPTNLDELLKSSEKVLLKKRVLALRRPYGELPPVVTHNMCDD
                     ANDPILNQIRHVRLFNDSSDRVKVIFHPEFLNANNPILGLDYDEFVRGCHLGVFPSYY
                     EPWGYTPAECTVMGVPSITTNVSGFGAYMEDLIETDQAKDYGIYIVDRRFKSPDESVE
                     QLADYMEEFVNKTRRQRINQRNRTERLSDLLDWKRMGLEYVKARQLGLRRAYPEQFKQ
                     LVGETISDANMNTLAGGKKFKIARPLSVPGSPKVRSNSTVYMTPGDLGTLQDANNADD
                     YFNLSTNGAIDNDDDDNDTSAYYEDN"
ORIGIN      
        1 atggctcgtg acttacaaaa tcatctactg ttcgaagtag caacagaagt aactaacagg
       61 gttggtggta tttactctgt cttgaagtcc aaggctccag tcactgtggc acaatacgga
      121 gacaactata cgctgcttgg acctttgaac aaggcgactt atgaaagtga ggttgaaaaa
      181 cttgactggg aagatgaaag tatctttcct gaagagctgt taccgatcca aaaaactttg
      241 atgtccatgc gggaaaaggg tgtgaacttt gtctacggta actggttgat tgagggagca
      301 ccacgtgtca ttttatttga gctggattct gtaagacact ttttgaacga atggaaggct
      361 gacctatggt ctctcgtcgg aattccatca ccagagcatg atcacgaaac aaacgatgcc
      421 atattgttgg gttatgttgt tgtgtggttt ttgggagaag tttcaaaact ggacagtagc
      481 catgccatca ttggccattt ccatgaatgg ctagctggtg tagccctgcc attgtgtaga
      541 aagaaaagaa ttgatgttgt aacgattttc accacgcacg caactttatt gggtagatac
      601 ttgtgtgccg ctggtgatgt agatttttat aacaatctac agtattttga tgtggaccaa
      661 gaagctggta agagaggcat atatcatagg tactgcattg agcgcgctgc ggctcatact
      721 gccgatgttt ttacgactgt gtcgcaaatc actgcattag aagcggagca tttgttgaag
      781 aggaaaccgg atggcatttt gcccaatggt ttgaacgttg ttaagtttca agcagtacat
      841 gaatttcaaa atctgcatgc cctgaaaaag gacaaaatta atgatttcgt cagaggccat
      901 ttccatggtt gttttgattt cgatctagac aacacagttt atttctttat cgctggtaga
      961 tatgaataca aaaacaaagg tgctgacatg ttcattgaat cattggctcg tctcaattac
     1021 agattgaagg tttctggatc caagaagacg gtggtagcgt ttttgatcat gcctgccaaa
     1081 accaattcct tcactgtgga ggcactgaaa agccaagcca ttgtaaaatc tttggaaaat
     1141 actgttaatg aggtcaccgc atccattggg aagagaattt tcgagcatac gatgagatac
     1201 cctcataatg gcctagaatc agagttgccc actaatttag atgagctgtt gaagagttct
     1261 gaaaaggttt tgctgaagaa aagggtattg gcgctgagaa gaccttacgg ggaattgcct
     1321 ccggtagtca cacataacat gtgcgatgat gctaacgatc caattttaaa ccaaattaga
     1381 catgttagat tattcaatga ttcgagtgat cgtgtaaaag tgattttcca tcctgaattc
     1441 ttaaacgcca ataaccctat ccttggtttg gattatgacg agtttgttcg cggctgtcac
     1501 ttgggtgttt ttccatccta ttacgaacca tgggggtaca cgccagcaga atgtaccgtc
     1561 atgggtgtcc catctatcac aacaaacgtt tctgggttcg gtgcctacat ggaagacttg
     1621 attgaaacag accaagcgaa agactatggt atttatattg tagaccgtcg tttcaagagc
     1681 cctgatgaat ctgtcgagca attagcagac tacatggaag agtttgtaaa caagaccaga
     1741 agacaaagaa tcaaccaaag aaacagaacc gaaagactat cagacttgtt agattggaag
     1801 agaatggggt tggaatacgt taaggctaga cagttgggtc ttcgtagggc ctatccagag
     1861 cagttcaagc aactggtggg tgaaacaatt agtgacgcca atatgaatac tcttgccggt
     1921 ggcaagaaat tcaagattgc caggcctttg agtgtacccg gatcccccaa agtaaggtcc
     1981 aatagtactg tttacatgac tccgggcgat ttaggtaccc ttcaagatgc taataatgca
     2041 gatgactatt ttaatttgag cacgaatgga gccatcgaca atgacgatga tgacaacgat
     2101 acgtctgcat actacgagga taattaa
//
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Reference sequence information

  • RefSeq protein product
    See the reference protein sequence for glycogen (starch) synthase GSY1 (NP_116670.1).

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