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NCBI Reference Sequence: NM_001404213.1
FASTA Graphics
LOCUS NM_001404213 1893 bp mRNA linear INV 04-DEC-2024 DEFINITION Caenorhabditis elegans E3 ubiquitin-protein ligase (ekl-5), partial mRNA. ACCESSION NM_001404213 VERSION NM_001404213.1 DBLINK BioProject: PRJNA158 KEYWORDS RefSeq. SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 1893) AUTHORS Sulson,J.E. and Waterston,R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282 (5396), 2012-2018 (1998) PUBMED 9851916 REMARK Erratum:[Science 1999 Jan 1;283(5398):35] REFERENCE 2 (bases 1 to 1893) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (04-DEC-2024) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 1893) AUTHORS WormBase. CONSRTM WormBase Consortium TITLE Direct Submission JOURNAL Submitted (17-OCT-2024) WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 4 (bases 1 to 1893) AUTHORS Sulson,J.E. and Waterston,R. TITLE Direct Submission JOURNAL Submitted (03-MAR-2003) Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA COMMENT REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003284). COMPLETENESS: incomplete on the 5' end. FEATURES Location/Qualifiers source 1..1893 /organism="Caenorhabditis elegans" /mol_type="mRNA" /strain="Bristol N2" /db_xref="taxon:6239" /chromosome="X" gene <1..1893 /gene="ekl-5" /locus_tag="CELE_Y26E6A.1" /db_xref="GeneID:181500" /db_xref="WormBase:WBGene00012512" CDS 1..1350 /gene="ekl-5" /locus_tag="CELE_Y26E6A.1" /standard_name="Y26E6A.1b" /note="Partially confirmed by transcript evidence" /codon_start=1 /product="E3 ubiquitin-protein ligase" /protein_id="NP_001391205.1" /db_xref="GeneID:181500" /db_xref="WormBase:WBGene00012512" /translation="MLPVANNPEEQANEEELRDQAADIPQARNHNLRNHARRHREMFE RARANRRLQADRGAQAARERGGPAAGRAQLGRARAREALARANNARQALQPDAAVLEA LDEINGIDFDDEEVPNRRDVRQDPQVLEFANLFPRLIALDPHDAQLANQNLARMARHL APENYIRVARREQRQSFMCGICKSSVHNVAFLNHLDTCAASKGACKIMKDMEYHHFLS STYSLRQQLYKLRERLELEYFEARVNPERLEHMECAGCITCAEHLLGACMPNMQRDVY QIHANKIEKTVMAHFEQFLELTKEDGLGEIISKHTAHFDSIQDCIEDGPTDFETQNRR HGTWYEFRKDTVEEQQLEKNKYLEETIEKHLVKYRSHRTEVTKLIGLFMDKMLACIEE LKNSPRLARIIQLRRVHCIDPIRGQVPLEGEAEEIEDDEEDINAVVQAEEFLQLGII" ORIGIN 1 atgctgcctg ttgcaaacaa tccagaagag caggctaatg aagaagaatt gcgcgatcag 61 gctgccgata ttcctcaagc tcgtaatcat aatttgagaa atcatgcacg tcgtcatcgt 121 gagatgttcg agagagcaag agctaacaga agacttcaag cggatcgtgg cgctcaggct 181 gcacgtgaac gtggtggccc tgctgctgga cgcgcacaac ttggacgtgc tcgggcacgt 241 gaagctctag ctagagctaa caatgcgaga caggcgctac aacctgatgc tgcagttctc 301 gaggctttgg atgagatcaa tggcattgat ttcgatgatg aagaagttcc aaatcgacgt 361 gatgttcgcc aagatcccca agtccttgag tttgccaatt tatttccacg attgatcgcc 421 ttggacccac atgatgcaca acttgcgaat caaaatctgg caaggatggc ccgtcactta 481 gcaccagaga attacattcg ggtggctaga agagagcaaa gacaatcatt catgtgcggg 541 atttgcaaga gtagcgtcca caatgttgca tttcttaacc acttggatac ctgcgctgca 601 agcaaaggag catgcaaaat tatgaaagat atggaatacc accatttctt gtccagcacc 661 tacagccttc gtcaacagtt gtacaagttg agagagagac ttgaactcga atattttgag 721 gcaagagtca atccggaaag attggaacac atggagtgtg caggttgcat aacttgtgcc 781 gagcatttgc ttggtgcatg tatgccaaac atgcaaagag atgtgtatca aattcatgcc 841 aataagatcg aaaagaccgt tatggcacat ttcgagcagt ttctagaact cacgaaagaa 901 gacggactcg gcgaaattat ttcgaagcac accgctcact ttgactccat ccaagattgc 961 attgaagatg gacctacaga ctttgaaact caaaacagac gccatgggac ttggtacgaa 1021 tttcgcaagg ataccgttga agagcagcaa ttggaaaaga acaagtactt ggaagaaacc 1081 attgagaagc atttggtgaa gtatcgcagc catcgaactg aggttaccaa acttattggc 1141 ttgttcatgg acaaaatgct tgcctgtatt gaagagctga aaaacagccc gcgtcttgct 1201 cgcatcattc agctgagaag agttcactgc attgatccta tccgtggtca agttccgctt 1261 gagggagagg ccgaagaaat tgaggacgat gaagaagaca tcaatgcggt ggtacaggct 1321 gaggaattct tgcaactcgg aatcatttga tttgttttca atatccatac taccaatcat 1381 tcaagtcttg aattatattc attaaacact cttctcattc aaatacaaat aggagttcaa 1441 tacgccaaca gttattcgtc ttggtacttc tcttttttct atggttgtaa tttacataac 1501 ttatcacgtt tattccttgc aatatttttc gccatctctt cccaaagttc atctgtgaca 1561 tcatttcttc agtgtaattt atattctctc acaatccaaa ttttgtcatt tcatgttttc 1621 atttcataca ggattcacga tctcttgtga gtgaattcca aatatccaaa tacttgtcac 1681 tttttccctg tactttgttt catatcaacc cgaagcttaa cattatttta tttatttcac 1741 tcgaactatt gatttcaata tcttgaccgt gattgttttc aaaaattgtt tgccatttct 1801 gaccctgttt ctcactgttt cccactgtaa gtccatttcc cggcgtgaat tctttctcca 1861 tgtgattttt caaatacata aatttttgat ggg //
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