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Caenorhabditis elegans E3 ubiquitin-protein ligase (ekl-5), partial mRNA

NCBI Reference Sequence: NM_001404213.1

FASTA Graphics 

LOCUS       NM_001404213            1893 bp    mRNA    linear   INV 04-DEC-2024
DEFINITION  Caenorhabditis elegans E3 ubiquitin-protein ligase (ekl-5), partial
            mRNA.
ACCESSION   NM_001404213
VERSION     NM_001404213.1
DBLINK      BioProject: PRJNA158
KEYWORDS    RefSeq.
SOURCE      Caenorhabditis elegans
  ORGANISM  Caenorhabditis elegans
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
            Caenorhabditis.
REFERENCE   1  (bases 1 to 1893)
  AUTHORS   Sulson,J.E. and Waterston,R.
  CONSRTM   Caenorhabditis elegans Sequencing Consortium
  TITLE     Genome sequence of the nematode C. elegans: a platform for
            investigating biology
  JOURNAL   Science 282 (5396), 2012-2018 (1998)
   PUBMED   9851916
  REMARK    Erratum:[Science 1999 Jan 1;283(5398):35]
REFERENCE   2  (bases 1 to 1893)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2024) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 1893)
  AUTHORS   WormBase.
  CONSRTM   WormBase Consortium
  TITLE     Direct Submission
  JOURNAL   Submitted (17-OCT-2024) WormBase Group, European Bioinformatics
            Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org
REFERENCE   4  (bases 1 to 1893)
  AUTHORS   Sulson,J.E. and Waterston,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-MAR-2003) Nematode Sequencing Project: Sanger
            Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute
            at Washington University, St. Louis, MO 63110, USA
COMMENT     REVIEWED REFSEQ: This record has been curated by WormBase. This
            record is derived from an annotated genomic sequence (NC_003284).
            COMPLETENESS: incomplete on the 5' end.
FEATURES             Location/Qualifiers
     source          1..1893
                     /organism="Caenorhabditis elegans"
                     /mol_type="mRNA"
                     /strain="Bristol N2"
                     /db_xref="taxon:6239"
                     /chromosome="X"
     gene            <1..1893
                     /gene="ekl-5"
                     /locus_tag="CELE_Y26E6A.1"
                     /db_xref="GeneID:181500"
                     /db_xref="WormBase:WBGene00012512"
     CDS             1..1350
                     /gene="ekl-5"
                     /locus_tag="CELE_Y26E6A.1"
                     /standard_name="Y26E6A.1b"
                     /note="Partially confirmed by transcript evidence"
                     /codon_start=1
                     /product="E3 ubiquitin-protein ligase"
                     /protein_id="NP_001391205.1"
                     /db_xref="GeneID:181500"
                     /db_xref="WormBase:WBGene00012512"
                     /translation="MLPVANNPEEQANEEELRDQAADIPQARNHNLRNHARRHREMFE
                     RARANRRLQADRGAQAARERGGPAAGRAQLGRARAREALARANNARQALQPDAAVLEA
                     LDEINGIDFDDEEVPNRRDVRQDPQVLEFANLFPRLIALDPHDAQLANQNLARMARHL
                     APENYIRVARREQRQSFMCGICKSSVHNVAFLNHLDTCAASKGACKIMKDMEYHHFLS
                     STYSLRQQLYKLRERLELEYFEARVNPERLEHMECAGCITCAEHLLGACMPNMQRDVY
                     QIHANKIEKTVMAHFEQFLELTKEDGLGEIISKHTAHFDSIQDCIEDGPTDFETQNRR
                     HGTWYEFRKDTVEEQQLEKNKYLEETIEKHLVKYRSHRTEVTKLIGLFMDKMLACIEE
                     LKNSPRLARIIQLRRVHCIDPIRGQVPLEGEAEEIEDDEEDINAVVQAEEFLQLGII"
ORIGIN      
        1 atgctgcctg ttgcaaacaa tccagaagag caggctaatg aagaagaatt gcgcgatcag
       61 gctgccgata ttcctcaagc tcgtaatcat aatttgagaa atcatgcacg tcgtcatcgt
      121 gagatgttcg agagagcaag agctaacaga agacttcaag cggatcgtgg cgctcaggct
      181 gcacgtgaac gtggtggccc tgctgctgga cgcgcacaac ttggacgtgc tcgggcacgt
      241 gaagctctag ctagagctaa caatgcgaga caggcgctac aacctgatgc tgcagttctc
      301 gaggctttgg atgagatcaa tggcattgat ttcgatgatg aagaagttcc aaatcgacgt
      361 gatgttcgcc aagatcccca agtccttgag tttgccaatt tatttccacg attgatcgcc
      421 ttggacccac atgatgcaca acttgcgaat caaaatctgg caaggatggc ccgtcactta
      481 gcaccagaga attacattcg ggtggctaga agagagcaaa gacaatcatt catgtgcggg
      541 atttgcaaga gtagcgtcca caatgttgca tttcttaacc acttggatac ctgcgctgca
      601 agcaaaggag catgcaaaat tatgaaagat atggaatacc accatttctt gtccagcacc
      661 tacagccttc gtcaacagtt gtacaagttg agagagagac ttgaactcga atattttgag
      721 gcaagagtca atccggaaag attggaacac atggagtgtg caggttgcat aacttgtgcc
      781 gagcatttgc ttggtgcatg tatgccaaac atgcaaagag atgtgtatca aattcatgcc
      841 aataagatcg aaaagaccgt tatggcacat ttcgagcagt ttctagaact cacgaaagaa
      901 gacggactcg gcgaaattat ttcgaagcac accgctcact ttgactccat ccaagattgc
      961 attgaagatg gacctacaga ctttgaaact caaaacagac gccatgggac ttggtacgaa
     1021 tttcgcaagg ataccgttga agagcagcaa ttggaaaaga acaagtactt ggaagaaacc
     1081 attgagaagc atttggtgaa gtatcgcagc catcgaactg aggttaccaa acttattggc
     1141 ttgttcatgg acaaaatgct tgcctgtatt gaagagctga aaaacagccc gcgtcttgct
     1201 cgcatcattc agctgagaag agttcactgc attgatccta tccgtggtca agttccgctt
     1261 gagggagagg ccgaagaaat tgaggacgat gaagaagaca tcaatgcggt ggtacaggct
     1321 gaggaattct tgcaactcgg aatcatttga tttgttttca atatccatac taccaatcat
     1381 tcaagtcttg aattatattc attaaacact cttctcattc aaatacaaat aggagttcaa
     1441 tacgccaaca gttattcgtc ttggtacttc tcttttttct atggttgtaa tttacataac
     1501 ttatcacgtt tattccttgc aatatttttc gccatctctt cccaaagttc atctgtgaca
     1561 tcatttcttc agtgtaattt atattctctc acaatccaaa ttttgtcatt tcatgttttc
     1621 atttcataca ggattcacga tctcttgtga gtgaattcca aatatccaaa tacttgtcac
     1681 tttttccctg tactttgttt catatcaacc cgaagcttaa cattatttta tttatttcac
     1741 tcgaactatt gatttcaata tcttgaccgt gattgttttc aaaaattgtt tgccatttct
     1801 gaccctgttt ctcactgttt cccactgtaa gtccatttcc cggcgtgaat tctttctcca
     1861 tgtgattttt caaatacata aatttttgat ggg
//
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