LOCUS NM_003074 6354 bp mRNA linear PRI 19-SEP-2024
DEFINITION Homo sapiens SWI/SNF related BAF chromatin remodeling complex
subunit C1 (SMARCC1), mRNA.
ACCESSION NM_003074
VERSION NM_003074.4
KEYWORDS RefSeq; MANE Select.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 6354)
AUTHORS Singh,A.K., Allington,G., Viviano,S., McGee,S., Kiziltug,E., Ma,S.,
Zhao,S., Mekbib,K.Y., Shohfi,J.P., Duy,P.Q., DeSpenza,T. Jr.,
Furey,C.G., Reeves,B.C., Smith,H., Sousa,A.M.M., Cherskov,A.,
Allocco,A., Nelson-Williams,C., Haider,S., Rizvi,S.R.A.,
Alper,S.L., Sestan,N., Shimelis,H., Walsh,L.K., Lifton,R.P.,
Moreno-De-Luca,A., Jin,S.C., Kruszka,P., Deniz,E. and Kahle,K.T.
TITLE A novel SMARCC1 BAFopathy implicates neural progenitor epigenetic
dysregulation in human hydrocephalus
JOURNAL Brain 147 (4), 1553-1570 (2024)
PUBMED 38128548
REMARK GeneRIF: A novel SMARCC1 BAFopathy implicates neural progenitor
epigenetic dysregulation in human hydrocephalus.
REFERENCE 2 (bases 1 to 6354)
AUTHORS Hourvitz,N., Kurolap,A., Mory,A., Haratz,K.K., Kidron,D.,
Malinger,G., Baris Feldman,H. and Yaron,Y.
TITLE SMARCC1 is a susceptibility gene for congenital hydrocephalus with
an autosomal dominant inheritance mode and incomplete penetrance
JOURNAL Prenat Diagn 43 (10), 1374-1377 (2023)
PUBMED 37639281
REMARK GeneRIF: SMARCC1 is a susceptibility gene for congenital
hydrocephalus with an autosomal dominant inheritance mode and
incomplete penetrance.
REFERENCE 3 (bases 1 to 6354)
AUTHORS Rive Le Gouard,N., Nicolle,R., Lefebvre,M., Gelot,A., Heide,S.,
Gerasimenko,A., Grigorescu,R., Derive,N., Jouannic,J.M., Garel,C.,
Valence,S., Quenum-Miraillet,G., Chantot-Bastaraud,S., Keren,B.,
Heron,D. and Attie-Bitach,T.
TITLE First reports of fetal SMARCC1 related hydrocephalus
JOURNAL Eur J Med Genet 66 (8), 104797 (2023)
PUBMED 37285932
REMARK GeneRIF: First reports of fetal SMARCC1 related hydrocephalus.
Review article
REFERENCE 4 (bases 1 to 6354)
AUTHORS Paun,O., Tan,Y.X., Patel,H., Strohbuecker,S., Ghanate,A.,
Cobolli-Gigli,C., Llorian Sopena,M., Gerontogianni,L.,
Goldstone,R., Ang,S.L., Guillemot,F. and Dias,C.
TITLE Pioneer factor ASCL1 cooperates with the mSWI/SNF complex at distal
regulatory elements to regulate human neural differentiation
JOURNAL Genes Dev 37 (5-6), 218-242 (2023)
PUBMED 36931659
REFERENCE 5 (bases 1 to 6354)
AUTHORS Liu,W., Wang,Z., Liu,S., Zhang,X., Cao,X. and Jiang,M.
TITLE RNF138 inhibits late inflammatory gene transcription through
degradation of SMARCC1 of the SWI/SNF complex
JOURNAL Cell Rep 42 (2), 112097 (2023)
PUBMED 36800290
REMARK GeneRIF: RNF138 inhibits late inflammatory gene transcription
through degradation of SMARCC1 of the SWI/SNF complex.
REFERENCE 6 (bases 1 to 6354)
AUTHORS Ring,H.Z., Vameghi-Meyers,V., Wang,W., Crabtree,G.R. and Francke,U.
TITLE Five SWI/SNF-related, matrix-associated, actin-dependent regulator
of chromatin (SMARC) genes are dispersed in the human genome
JOURNAL Genomics 51 (1), 140-143 (1998)
PUBMED 9693044
REFERENCE 7 (bases 1 to 6354)
AUTHORS Fryer,C.J. and Archer,T.K.
TITLE Chromatin remodelling by the glucocorticoid receptor requires the
BRG1 complex
JOURNAL Nature 393 (6680), 88-91 (1998)
PUBMED 9590696
REFERENCE 8 (bases 1 to 6354)
AUTHORS Reyes,J.C., Muchardt,C. and Yaniv,M.
TITLE Components of the human SWI/SNF complex are enriched in active
chromatin and are associated with the nuclear matrix
JOURNAL J Cell Biol 137 (2), 263-274 (1997)
PUBMED 9128241
REFERENCE 9 (bases 1 to 6354)
AUTHORS Wang,W., Cote,J., Xue,Y., Zhou,S., Khavari,P.A., Biggar,S.R.,
Muchardt,C., Kalpana,G.V., Goff,S.P., Yaniv,M., Workman,J.L. and
Crabtree,G.R.
TITLE Purification and biochemical heterogeneity of the mammalian SWI-SNF
complex
JOURNAL EMBO J 15 (19), 5370-5382 (1996)
PUBMED 8895581
REFERENCE 10 (bases 1 to 6354)
AUTHORS Wang,W., Xue,Y., Zhou,S., Kuo,A., Cairns,B.R. and Crabtree,G.R.
TITLE Diversity and specialization of mammalian SWI/SNF complexes
JOURNAL Genes Dev 10 (17), 2117-2130 (1996)
PUBMED 8804307
COMMENT VALIDATED REFSEQ: This record has undergone validation or
preliminary review. The reference sequence was derived from
BC012101.1, BC050564.1, BC040242.1 and AC112512.6.
On Nov 23, 2018 this sequence version replaced NM_003074.3.
Summary: The protein encoded by this gene is a member of the
SWI/SNF family of proteins, whose members display helicase and
ATPase activities and which are thought to regulate transcription
of certain genes by altering the chromatin structure around those
genes. The encoded protein is part of the large ATP-dependent
chromatin remodeling complex SNF/SWI and contains a predicted
leucine zipper motif typical of many transcription factors.
[provided by RefSeq, Jul 2008].
Publication Note: This RefSeq record includes a subset of the
publications that are available for this gene. Please see the Gene
record to access additional publications.
##Evidence-Data-START##
Transcript exon combination :: U66615.1, BC050564.1 [ECO:0000332]
RNAseq introns :: mixed sample support SAMEA1965299,
SAMEA1966682 [ECO:0006172]
##Evidence-Data-END##
##RefSeq-Attributes-START##
MANE Ensembl match :: ENST00000254480.10/ ENSP00000254480.5
RefSeq Select criteria :: based on single protein-coding transcript
##RefSeq-Attributes-END##
COMPLETENESS: full length.
PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP
1-2540 BC012101.1 23-2562
2541-3893 BC050564.1 2492-3844
3894-4311 BC040242.1 2348-2765
4312-5735 BC040242.1 2767-4190
5736-6354 AC112512.6 121467-122085 c
FEATURES Location/Qualifiers
source 1..6354
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="3"
/map="3p21.31"
gene 1..6354
/gene="SMARCC1"
/gene_synonym="BAF155; CRACC1; HYC5; Rsc8; SRG3; SWI3"
/note="SWI/SNF related BAF chromatin remodeling complex
subunit C1"
/db_xref="GeneID:6599"
/db_xref="HGNC:HGNC:11104"
/db_xref="MIM:601732"
exon 1..291
/gene="SMARCC1"
/gene_synonym="BAF155; CRACC1; HYC5; Rsc8; SRG3; SWI3"
/inference="alignment:Splign:2.1.0"
CDS 97..3414
/gene="SMARCC1"
/gene_synonym="BAF155; CRACC1; HYC5; Rsc8; SRG3; SWI3"
/note="chromatin remodeling complex BAF155 subunit;
SWI/SNF complex 155 kDa subunit; mammalian chromatin
remodeling complex BRG1-associated factor 155;
SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily C member 1; SWI/SNF
related, matrix associated, actin dependent regulator of
chromatin subfamily c member 1"
/codon_start=1
/product="SWI/SNF complex subunit SMARCC1"
/protein_id="NP_003065.3"
/db_xref="CCDS:CCDS2758.1"
/db_xref="GeneID:6599"
/db_xref="HGNC:HGNC:11104"
/db_xref="MIM:601732"
/translation="MAAAAGGGGPGTAVGATGSGIAAAAAGLAVYRRKDGGPATKFWE
SPETVSQLDSVRVWLGKHYKKYVHADAPTNKTLAGLVVQLLQFQEDAFGKHVTNPAFT
KLPAKCFMDFKAGGALCHILGAAYKYKNEQGWRRFDLQNPSRMDRNVEMFMNIEKTLV
QNNCLTRPNIYLIPDIDLKLANKLKDIIKRHQGTFTDEKSKASHHIYPYSSSQDDEEW
LRPVMRKEKQVLVHWGFYPDSYDTWVHSNDVDAEIEDPPIPEKPWKVHVKWILDTDIF
NEWMNEEDYEVDENRKPVSFRQRISTKNEEPVRSPERRDRKASANARKRKHSPSPPPP
TPTESRKKSGKKGQASLYGKRRSQKEEDEQEDLTKDMEDPTPVPNIEEVVLPKNVNLK
KDSENTPVKGGTVADLDEQDEETVTAGGKEDEDPAKGDQSRSVDLGEDNVTEQTNHII
IPSYASWFDYNCIHVIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTS
TACRRNLTGDVCAVMRVHAFLEQWGLVNYQVDPESRPMAMGPPPTPHFNVLADTPSGL
VPLHLRSPQVPAAQQMLNFPEKNKEKPVDLQNFGLRTDIYSKKTLAKSKGASAGREWT
EQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLENSDASLGPLA
YQPVPFSQSGNPVMSTVAFLASVVDPRVASAAAKAALEEFSRVREEVPLELVEAHVKK
VQEAARASGKVDPTYGLESSCIAGTGPDEPEKLEGAEEEKMEADPDGQQPEKAENKVE
NETDEGDKAQDGENEKNSEKEQDSEVSEDTKSEEKETEENKELTDTCKERESDTGKKK
VEHEISEGNVATAAAAALASAATKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHF
EELETIMDREKEALEQQRQQLLTERQNFHMEQLKYAELRARQQMEQQQHGQNPQQAHQ
HSGGPGLAPLGAAGHPGMMPHQQPPPYPLMHHQMPPPHPPQPGQIPGPGSMMPGQHMP
GRMIPTVAANIHPSGSGPTPPGMPPMPGNILGPRVPLTAPNGMYPPPPQQQPPPPPPA
DGVPPPPAPGPPASAAP"
misc_feature 100..102
/gene="SMARCC1"
/gene_synonym="BAF155; CRACC1; HYC5; Rsc8; SRG3; SWI3"
/note="N-acetylalanine. /evidence=ECO:0000269|Ref.3,
ECO:0007744|PubMed:22814378; propagated from
UniProtKB/Swiss-Prot (Q92922.3); acetylation site"
misc_feature 178..1002
/gene="SMARCC1"
/gene_synonym="BAF155; CRACC1; HYC5; Rsc8; SRG3; SWI3"
/note="propagated from UniProtKB/Swiss-Prot (Q92922.3);
Region: MarR-like, BRCT and chromo domains module.
/evidence=ECO:0000255|PROSITE-ProRule:PRU01376"
misc_feature 982..1413
/gene="SMARCC1"
/gene_synonym="BAF155; CRACC1; HYC5; Rsc8; SRG3; SWI3"
/note="propagated from UniProtKB/Swiss-Prot (Q92922.3);
Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite"
misc_feature 1024..1026
/gene="SMARCC1"
/gene_synonym="BAF155; CRACC1; HYC5; Rsc8; SRG3; SWI3"
/note="Phosphoserine.
/evidence=ECO:0007744|PubMed:17081983,
ECO:0007744|PubMed:20068231, ECO:0007744|PubMed:23186163;
propagated from UniProtKB/Swiss-Prot (Q92922.3);
phosphorylation site"
misc_feature 1078..1080
/gene="SMARCC1"
/gene_synonym="BAF155; CRACC1; HYC5; Rsc8; SRG3; SWI3"
/note="Phosphoserine.
/evidence=ECO:0007744|PubMed:18669648,
ECO:0007744|PubMed:19690332, ECO:0007744|PubMed:20068231,
ECO:0007744|PubMed:21406692, ECO:0007744|PubMed:23186163,
ECO:0007744|PubMed:24275569; propagated from
UniProtKB/Swiss-Prot (Q92922.3); phosphorylation site"
misc_feature 1084..1086
/gene="SMARCC1"
/gene_synonym="BAF155; CRACC1; HYC5; Rsc8; SRG3; SWI3"
/note="Phosphoserine.
/evidence=ECO:0007744|PubMed:18669648,
ECO:0007744|PubMed:19690332, ECO:0007744|PubMed:20068231,
ECO:0007744|PubMed:21406692, ECO:0007744|PubMed:23186163,
ECO:0007744|PubMed:24275569; propagated from
UniProtKB/Swiss-Prot (Q92922.3); phosphorylation site"
misc_feature 1099..1101
/gene="SMARCC1"
/gene_synonym="BAF155; CRACC1; HYC5; Rsc8; SRG3; SWI3"
/note="Phosphothreonine.
/evidence=ECO:0007744|PubMed:18669648,
ECO:0007744|PubMed:21406692; propagated from
UniProtKB/Swiss-Prot (Q92922.3); phosphorylation site"
misc_feature 1129..1131
/gene="SMARCC1"
/gene_synonym="BAF155; CRACC1; HYC5; Rsc8; SRG3; SWI3"
/note="N6-acetyllysine.
/evidence=ECO:0007744|PubMed:19608861; propagated from
UniProtKB/Swiss-Prot (Q92922.3); acetylation site"
misc_feature 1132..1134
/gene="SMARCC1"
/gene_synonym="BAF155; CRACC1; HYC5; Rsc8; SRG3; SWI3"
/note="N6-acetyllysine.
/evidence=ECO:0007744|PubMed:19608861; propagated from
UniProtKB/Swiss-Prot (Q92922.3); acetylation site"
misc_feature 1144..1146
/gene="SMARCC1"
/gene_synonym="BAF155; CRACC1; HYC5; Rsc8; SRG3; SWI3"
/note="Phosphoserine.
/evidence=ECO:0007744|PubMed:21406692; propagated from
UniProtKB/Swiss-Prot (Q92922.3); phosphorylation site"
misc_feature 1156..1158
/gene="SMARCC1"
/gene_synonym="BAF155; CRACC1; HYC5; Rsc8; SRG3; SWI3"
/note="N6-acetyllysine.
/evidence=ECO:0007744|PubMed:19608861; propagated from
UniProtKB/Swiss-Prot (Q92922.3); acetylation site"
misc_feature 1165..1167
/gene="SMARCC1"
/gene_synonym="BAF155; CRACC1; HYC5; Rsc8; SRG3; SWI3"
/note="Phosphoserine.
/evidence=ECO:0007744|PubMed:18669648,
ECO:0007744|PubMed:20068231; propagated from
UniProtKB/Swiss-Prot (Q92922.3); phosphorylation site"
misc_feature 1171..1173
/gene="SMARCC1"
/gene_synonym="BAF155; CRACC1; HYC5; Rsc8; SRG3; SWI3"
/note="N6-acetyllysine, alternate.
/evidence=ECO:0007744|PubMed:19608861; propagated from
UniProtKB/Swiss-Prot (Q92922.3); acetylation site"
misc_feature 1288..1290
/gene="SMARCC1"
/gene_synonym="BAF155; CRACC1; HYC5; Rsc8; SRG3; SWI3"
/note="Phosphothreonine.
/evidence=ECO:0007744|PubMed:21406692; propagated from
UniProtKB/Swiss-Prot (Q92922.3); phosphorylation site"
misc_feature 1813..1815
/gene="SMARCC1"
/gene_synonym="BAF155; CRACC1; HYC5; Rsc8; SRG3; SWI3"
/note="Phosphoserine.
/evidence=ECO:0007744|PubMed:20068231,
ECO:0007744|PubMed:23186163; propagated from
UniProtKB/Swiss-Prot (Q92922.3); phosphorylation site"
misc_feature 2329..2676
/gene="SMARCC1"
/gene_synonym="BAF155; CRACC1; HYC5; Rsc8; SRG3; SWI3"
/note="propagated from UniProtKB/Swiss-Prot (Q92922.3);
Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite"
misc_feature 2560..2562
/gene="SMARCC1"
/gene_synonym="BAF155; CRACC1; HYC5; Rsc8; SRG3; SWI3"
/note="Phosphoserine.
/evidence=ECO:0007744|PubMed:21406692; propagated from
UniProtKB/Swiss-Prot (Q92922.3); phosphorylation site"
misc_feature 2569..2571
/gene="SMARCC1"
/gene_synonym="BAF155; CRACC1; HYC5; Rsc8; SRG3; SWI3"
/note="Phosphoserine.
/evidence=ECO:0007744|PubMed:21406692; propagated from
UniProtKB/Swiss-Prot (Q92922.3); phosphorylation site"
misc_feature 2938..2940
/gene="SMARCC1"
/gene_synonym="BAF155; CRACC1; HYC5; Rsc8; SRG3; SWI3"
/note="N6-acetyllysine.
/evidence=ECO:0007744|PubMed:19608861; propagated from
UniProtKB/Swiss-Prot (Q92922.3); acetylation site"
misc_feature 2962..3180
/gene="SMARCC1"
/gene_synonym="BAF155; CRACC1; HYC5; Rsc8; SRG3; SWI3"
/note="propagated from UniProtKB/Swiss-Prot (Q92922.3);
Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite"
misc_feature 3217..3411
/gene="SMARCC1"
/gene_synonym="BAF155; CRACC1; HYC5; Rsc8; SRG3; SWI3"
/note="propagated from UniProtKB/Swiss-Prot (Q92922.3);
Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite"
misc_feature 3286..3288
/gene="SMARCC1"
/gene_synonym="BAF155; CRACC1; HYC5; Rsc8; SRG3; SWI3"
/note="Asymmetric dimethylarginine.
/evidence=ECO:0000250|UniProtKB:P97496; propagated from
UniProtKB/Swiss-Prot (Q92922.3); methylation site"
exon 292..411
/gene="SMARCC1"
/gene_synonym="BAF155; CRACC1; HYC5; Rsc8; SRG3; SWI3"
/inference="alignment:Splign:2.1.0"
exon 412..497
/gene="SMARCC1"
/gene_synonym="BAF155; CRACC1; HYC5; Rsc8; SRG3; SWI3"
/inference="alignment:Splign:2.1.0"
exon 498..579
/gene="SMARCC1"
/gene_synonym="BAF155; CRACC1; HYC5; Rsc8; SRG3; SWI3"
/inference="alignment:Splign:2.1.0"
exon 580..672
/gene="SMARCC1"
/gene_synonym="BAF155; CRACC1; HYC5; Rsc8; SRG3; SWI3"
/inference="alignment:Splign:2.1.0"
exon 673..742
/gene="SMARCC1"
/gene_synonym="BAF155; CRACC1; HYC5; Rsc8; SRG3; SWI3"
/inference="alignment:Splign:2.1.0"
exon 743..812
/gene="SMARCC1"
/gene_synonym="BAF155; CRACC1; HYC5; Rsc8; SRG3; SWI3"
/inference="alignment:Splign:2.1.0"
exon 813..888
/gene="SMARCC1"
/gene_synonym="BAF155; CRACC1; HYC5; Rsc8; SRG3; SWI3"
/inference="alignment:Splign:2.1.0"
exon 889..1014
/gene="SMARCC1"
/gene_synonym="BAF155; CRACC1; HYC5; Rsc8; SRG3; SWI3"
/inference="alignment:Splign:2.1.0"
exon 1015..1136
/gene="SMARCC1"
/gene_synonym="BAF155; CRACC1; HYC5; Rsc8; SRG3; SWI3"
/inference="alignment:Splign:2.1.0"
exon 1137..1261
/gene="SMARCC1"
/gene_synonym="BAF155; CRACC1; HYC5; Rsc8; SRG3; SWI3"
/inference="alignment:Splign:2.1.0"
exon 1262..1321
/gene="SMARCC1"
/gene_synonym="BAF155; CRACC1; HYC5; Rsc8; SRG3; SWI3"
/inference="alignment:Splign:2.1.0"
exon 1322..1359
/gene="SMARCC1"
/gene_synonym="BAF155; CRACC1; HYC5; Rsc8; SRG3; SWI3"
/inference="alignment:Splign:2.1.0"
exon 1360..1481
/gene="SMARCC1"
/gene_synonym="BAF155; CRACC1; HYC5; Rsc8; SRG3; SWI3"
/inference="alignment:Splign:2.1.0"
exon 1482..1553
/gene="SMARCC1"
/gene_synonym="BAF155; CRACC1; HYC5; Rsc8; SRG3; SWI3"
/inference="alignment:Splign:2.1.0"
exon 1554..1667
/gene="SMARCC1"
/gene_synonym="BAF155; CRACC1; HYC5; Rsc8; SRG3; SWI3"
/inference="alignment:Splign:2.1.0"
exon 1668..1821
/gene="SMARCC1"
/gene_synonym="BAF155; CRACC1; HYC5; Rsc8; SRG3; SWI3"
/inference="alignment:Splign:2.1.0"
exon 1822..1935
/gene="SMARCC1"
/gene_synonym="BAF155; CRACC1; HYC5; Rsc8; SRG3; SWI3"
/inference="alignment:Splign:2.1.0"
exon 1936..1995
/gene="SMARCC1"
/gene_synonym="BAF155; CRACC1; HYC5; Rsc8; SRG3; SWI3"
/inference="alignment:Splign:2.1.0"
exon 1996..2254
/gene="SMARCC1"
/gene_synonym="BAF155; CRACC1; HYC5; Rsc8; SRG3; SWI3"
/inference="alignment:Splign:2.1.0"
exon 2255..2416
/gene="SMARCC1"
/gene_synonym="BAF155; CRACC1; HYC5; Rsc8; SRG3; SWI3"
/inference="alignment:Splign:2.1.0"
exon 2417..2472
/gene="SMARCC1"
/gene_synonym="BAF155; CRACC1; HYC5; Rsc8; SRG3; SWI3"
/inference="alignment:Splign:2.1.0"
exon 2473..2587
/gene="SMARCC1"
/gene_synonym="BAF155; CRACC1; HYC5; Rsc8; SRG3; SWI3"
/inference="alignment:Splign:2.1.0"
exon 2588..2742
/gene="SMARCC1"
/gene_synonym="BAF155; CRACC1; HYC5; Rsc8; SRG3; SWI3"
/inference="alignment:Splign:2.1.0"
exon 2743..2877
/gene="SMARCC1"
/gene_synonym="BAF155; CRACC1; HYC5; Rsc8; SRG3; SWI3"
/inference="alignment:Splign:2.1.0"
exon 2878..3139
/gene="SMARCC1"
/gene_synonym="BAF155; CRACC1; HYC5; Rsc8; SRG3; SWI3"
/inference="alignment:Splign:2.1.0"
exon 3140..3316
/gene="SMARCC1"
/gene_synonym="BAF155; CRACC1; HYC5; Rsc8; SRG3; SWI3"
/inference="alignment:Splign:2.1.0"
exon 3317..6354
/gene="SMARCC1"
/gene_synonym="BAF155; CRACC1; HYC5; Rsc8; SRG3; SWI3"
/inference="alignment:Splign:2.1.0"
regulatory 5580..5585
/regulatory_class="polyA_signal_sequence"
/gene="SMARCC1"
/gene_synonym="BAF155; CRACC1; HYC5; Rsc8; SRG3; SWI3"
/note="hexamer: AATAAT"
polyA_site 5603
/gene="SMARCC1"
/gene_synonym="BAF155; CRACC1; HYC5; Rsc8; SRG3; SWI3"
regulatory 5707..5712
/regulatory_class="polyA_signal_sequence"
/gene="SMARCC1"
/gene_synonym="BAF155; CRACC1; HYC5; Rsc8; SRG3; SWI3"
/note="hexamer: AATAAA"
polyA_site 5730
/gene="SMARCC1"
/gene_synonym="BAF155; CRACC1; HYC5; Rsc8; SRG3; SWI3"
/note="major polyA site"
regulatory 6251..6256
/regulatory_class="polyA_signal_sequence"
/gene="SMARCC1"
/gene_synonym="BAF155; CRACC1; HYC5; Rsc8; SRG3; SWI3"
/note="hexamer: AATAAA"
polyA_site 6270
/gene="SMARCC1"
/gene_synonym="BAF155; CRACC1; HYC5; Rsc8; SRG3; SWI3"
regulatory 6335..6340
/regulatory_class="polyA_signal_sequence"
/gene="SMARCC1"
/gene_synonym="BAF155; CRACC1; HYC5; Rsc8; SRG3; SWI3"
/note="hexamer: ACTAAA"
polyA_site 6354
/gene="SMARCC1"
/gene_synonym="BAF155; CRACC1; HYC5; Rsc8; SRG3; SWI3"
ORIGIN
1 agtggcggct acgcgcgcgg gggtgcgcgc gggaacgacc gggaaacacc gcgagggccg
61 gggtgggcca ggctgtgggg acgacgggct gcgacgatgg ccgcagcggc gggcggcggc
121 gggccgggga cagcggtagg cgccacgggc tcggggattg cggcggcagc cgcaggccta
181 gctgtttatc gacggaagga tgggggcccg gccaccaagt tttgggagag cccggagacg
241 gtgtcccagc tggattcggt gcgggtctgg ctgggcaagc actacaagaa gtatgttcat
301 gcggatgctc ctaccaataa aacactggct gggctggtgg tgcagcttct tcagttccag
361 gaagatgcct ttgggaagca tgtcaccaac ccggccttca ccaaactccc tgcaaagtgt
421 ttcatggatt tcaaagctgg aggcgcctta tgtcacattc ttggggctgc ttacaagtat
481 aaaaatgaac agggatggcg gaggtttgac ctacagaacc catctcgaat ggatcgtaat
541 gtggaaatgt ttatgaacat tgaaaaaaca ttggtgcaga acaattgttt gaccagaccc
601 aacatctacc tcattccaga cattgatctg aagttggcta acaaattgaa agatatcatc
661 aaacgacatc agggaacatt tacggatgag aagtcaaaag cttcccacca catttaccca
721 tattcttcct cacaagacga tgaagaatgg ttgagaccgg tgatgagaaa agagaagcaa
781 gtgttagtgc attggggctt ttacccagac agctatgata cttgggtcca tagtaatgat
841 gttgatgctg aaattgaaga tccaccaatt ccagaaaaac catggaaggt tcatgtgaaa
901 tggattttgg acactgatat tttcaatgaa tggatgaatg aggaggatta tgaggtggat
961 gaaaatagga agcctgtgag ttttcgtcag cggatttcaa ccaagaatga agagccagtc
1021 agaagtccag aaagaagaga tagaaaagca tcagctaatg ctcgaaagag gaaacattcg
1081 ccttcgcctc cccctccgac accaacagaa tcacggaaga agagtgggaa gaaaggccaa
1141 gctagccttt atgggaagcg cagaagtcag aaagaggaag atgagcaaga agatctaacc
1201 aaggatatgg aagacccaac acctgtaccc aatatagaag aagtagtact tcccaaaaat
1261 gtgaacctaa agaaagatag tgaaaataca cctgttaaag gaggaactgt agcggatcta
1321 gatgagcagg atgaagaaac agtcacagca ggaggaaagg aagatgaaga tcctgccaaa
1381 ggtgatcaga gtcgatcagt tgaccttggg gaagataatg tgacagagca gaccaatcac
1441 attattattc ctagttatgc atcatggttt gattataact gtattcatgt gattgaacgg
1501 cgtgctcttc ctgagttctt caatggaaaa aacaaatcca agactccaga aatatacttg
1561 gcatatcgaa attttatgat tgacacgtat cgtctaaacc cccaagagta tttaactagc
1621 actgcttgtc ggaggaactt gactggagat gtgtgtgctg tgatgagggt ccatgccttt
1681 ttagagcagt ggggactcgt taattaccaa gttgacccgg aaagtagacc catggcaatg
1741 ggacctcctc ctactcctca ttttaatgta ttagctgata ccccctctgg gcttgtgcct
1801 ctgcatcttc gatcacctca ggttcctgct gctcaacaga tgctaaattt tcctgagaaa
1861 aacaaggaaa aaccagttga tttgcagaac tttggtctcc gtactgacat ttactccaag
1921 aaaacattag caaagagtaa aggtgctagt gctggaagag aatggactga acaggagacc
1981 cttctactcc tggaggccct ggagatgtac aaggatgatt ggaacaaagt gtcggaacat
2041 gttggaagtc gtactcagga tgaatgcatc ctccactttt tgagacttcc cattgaggac
2101 ccataccttg agaattcaga tgcttccctt gggcctttgg cctaccagcc tgtccccttc
2161 agtcagtcag gaaatccagt tatgagtact gttgcttttt tggcatctgt ggtggaccct
2221 cgcgtggcat ctgctgcagc aaaagcggct ttggaggagt tttctcgggt ccgggaggag
2281 gtaccactgg aattggttga agctcatgtc aagaaagtac aagaagcagc acgagcctct
2341 gggaaagtgg atcccaccta cggtctggag agcagctgca ttgcaggcac agggcccgat
2401 gagccagaga agcttgaagg agctgaagag gaaaaaatgg aagccgaccc tgatggtcag
2461 cagcctgaaa aggcagaaaa taaagtggaa aatgaaacgg atgaaggtga taaagcacaa
2521 gatggagaaa atgaaaaaaa tagtgaaaag gaacaggata gtgaagtgag tgaggatacc
2581 aaatcagaag aaaaggagac tgaagagaac aaagaactca ctgatacatg taaagaaaga
2641 gaaagtgata ctgggaagaa gaaagtagaa catgaaattt ccgaaggaaa tgttgccaca
2701 gccgcagcag ctgctcttgc ctcagcggct accaaagcca agcacctggc tgcagtggaa
2761 gaaagaaaga tcaagtccct ggtagctctc ttggttgaga cacaaatgaa gaaactagag
2821 atcaaacttc gacattttga agagctggaa actatcatgg acagagagaa agaagctcta
2881 gaacaacaga ggcagcagtt gcttactgaa cgccaaaact tccacatgga acagctgaag
2941 tatgctgaat tacgagcacg acagcaaatg gaacagcagc agcatggcca gaaccctcaa
3001 caggcacacc agcactcagg aggacctggc ctggccccac ttggagcagc agggcaccct
3061 ggcatgatgc ctcatcaaca gccccctccc taccctctga tgcaccacca gatgccacca
3121 cctcatccac cccagccagg tcagatacca ggcccaggtt ccatgatgcc cgggcagcac
3181 atgccaggcc gcatgattcc cactgttgca gccaacatcc acccctctgg gagtggccct
3241 acccctcctg gcatgccacc aatgccagga aacatcttag gaccccgggt acccctgaca
3301 gcacctaacg gcatgtatcc ccctccacca cagcagcagc caccgccacc accacctgca
3361 gatggggtcc ctccgcctcc tgctcctggc ccgccagcct cagctgctcc ttagcctgga
3421 agatgcaggg aacctccacg cccaccacca tgagctggag tggggatgac aagacttgtg
3481 ttcctcaact ttcttgggtt tctttcagga tttttcttct cacagctcca agcacgtgtc
3541 ccgtgcctcc ccactcctct taccacccct ctctctgaca ctttttgtgt tgggtcctca
3601 gccaacactc aaggggaaac ctgtagtgac agtgtgccct ggtcatcctt aaaataacct
3661 gcatctcccc tgtcctggtg tgggagtaag ctgacagttt ctctgcaggt cctgtcaact
3721 ttagcatgct atgtctttac catttttgct ctcttgcagt tttttgcttt gtcttatgct
3781 tctatggata atgctatata atcattatct ttttatcttt ctgttattat tgttttaaag
3841 gagagcatcc taagttaata ggaaccaaaa aataatgatg ggcagaaggg ggggaatagc
3901 cacaggggac aaaccttaag gcattataag tgaccttatt tctgcttttc tgagctaaga
3961 atggtgctga tggtaaagtt tgagactttt gccacacaca aatttgtgaa aattaaacga
4021 gatgtggaag gagaacctca gtgattttat tccctagtga ggcctctgag ggcctccaca
4081 ctgcctggca gaacatacca ctgaactagt atgtgctaga ggagggcaca aacatccgct
4141 ccttccctag gcctgctggc tctggttttc tatgcagatg attcattgga ttgggggtga
4201 gtgttttgtt tttctggggg cagtgtgagc tttgagggtt ggaatattgg gaggcattcc
4261 ttagtttcct caactagcct ggaaagttag gagtctaggg taattacccc caatgagtct
4321 agcctactat tcactgcttt gtgtgcattt ttttctccct ctttaaaaaa ccctttaaaa
4381 gaaaaaaaaa agtagatagt gctaaatatt ttagctcatg aaacttggtt aggatggctg
4441 ggggtacaag tccccaaact acctcttgtt acagtagcca gggagtggaa tttcgtcaac
4501 cggtactttt aaggttagga tgggacggga aaagtgaagc aggatattag ctccttatac
4561 cttctccctt ccatttctga gatctcacat tccatctatc acagggtttt caaagagatg
4621 ctgagggtaa caaggaactc acttggcagt cagagcatca tgctttgagg tttggggtgc
4681 tcaggctggg agggtagaat gccattccag aggacaagcc acaaaaatgc cttaatttga
4741 gctcgtattt acccctgctg ataagtgact tgagagttcc cggttttttc ctcttgtcct
4801 tccctccctt ctgtccttcc atgtgtgggg aaagggtgtt tttggtagag cttggtttcc
4861 aaagcgcctg gctttctcac ttcacattct caagtggcag tttcattatt tagaatgcaa
4921 ggtggacatc ttttggatat ctttttctat atattttcta aagctttaca tatgagaggg
4981 tatagggagg tgtttataaa acacttgaga acttttttcc ttaatatcag aaagcaaaaa
5041 aataaaacca caattgagat ttgcctttca aaccctcagg tttgcctcta accaggtgtc
5101 cctggtcacc atcagagtac tggaatacgg gaaccgagga gaccttggtc cttttgtttt
5161 tgttctggac tcttgggagt ggaaatgaga atgagtttat tcctactgga gcttagttcc
5221 aatgcatttg gctccagaaa gaccccagtg ccttttgaca atggccaggg ttttacctac
5281 ttcctgccag tctttcccaa aggaaactca ttccaaatac ttcttttttc ccctggagtc
5341 cgagaaggaa aatggaattc tggttcatac tgtggtccct tgtaacctca ggtctttaat
5401 gtgatcactt tcaaatttaa aagatccagg tggaaatatt tttactatag taataattct
5461 acaaaatacc tgaattctta acactgttat atttcagtat aagtggtggc tttttctttt
5521 catgtctttg atctggtttt attcctgtaa ttcagccacc tgattttgtg agggggggga
5581 ataatatgtg gtttttgtac aaacatgttt ctcagtgtgt tgttattttg gaaaaaatga
5641 ggggagggag tttggcaaga atggagaaaa tgaatgaaga aggcctaatc tctctctttt
5701 tcagtgaata aatggaacac catttctgga ttctagtccc attctctgca ttcatacacc
5761 agtttcttca tatatcctat gaagaaccta aacatttggc cccacctggt cttggtttga
5821 tcagcagtta aaattctgtg actcgggctt ccttcccgac tgcccacctt catgatgtgt
5881 aaggaacata cattttgagg gtacctcacc cactgttcat ttgcatggtc aaagtgaaaa
5941 tgagtggaag ttctccaaaa atgatggcca acatcctggc acctccaggt gtgagaaata
6001 gctttgcttg gtgaatggga taatgtttgt caggatgcag tttagacagt cccaagttgg
6061 aggcaggcct tgagggcaga agattctgtg aaccttgggg gacagctttt gggtactcac
6121 agatataaac cctgtgcaga aaaaaagaag tgattgtttt caggatgctt ataaatcgag
6181 tgaagcaaaa gaagaggatt ctgtgtctgc catgagatga acgccctgct cttcacgaag
6241 gtgtgcctct aataaagaga gccaaagcca gctgggtctc accagattcc tatactttct
6301 caaggatgtt gggggaggtt aatcctttat cgaaactaaa gactggttta taaa
//