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Mus musculus SSX member B1 (Ssxb1), mRNA

NCBI Reference Sequence: NM_026492.4

FASTA Graphics 

LOCUS       NM_026492                 50 bp    mRNA    linear   ROD 08-AUG-2023
DEFINITION  Mus musculus SSX member B1 (Ssxb1), mRNA.
ACCESSION   NM_026492 REGION: 456..505
VERSION     NM_026492.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 50)
  AUTHORS   Chen YT, Alpen B, Ono T, Gure AO, Scanlan MA, Biggs WH 3rd, Arden
            K, Nakayama E and Old LJ.
  TITLE     Identification and characterization of mouse SSX genes: a multigene
            family on the X chromosome with restricted cancer/testis expression
  JOURNAL   Genomics 82 (6), 628-636 (2003)
   PUBMED   14611804
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BX890632.7.
            
            On Mar 18, 2023 this sequence version replaced NM_026492.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK006218.1, AY244792.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-123               BX890632.7         109599-109721
            124-250             BX890632.7         112166-112292
            251-365             BX890632.7         112748-112862
            366-455             BX890632.7         113166-113255
            456-505             BX890632.7         113731-113780
            506-581             BX890632.7         114386-114461
            582-698             BX890632.7         117755-117871
            699-879             BX890632.7         118275-118455
FEATURES             Location/Qualifiers
     source          1..50
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="X"
                     /map="X 3.81 cM"
     gene            <1..>50
                     /gene="Ssxb1"
                     /gene_synonym="4930414C09Rik"
                     /note="SSX member B1"
                     /db_xref="GeneID:67985"
                     /db_xref="MGI:MGI:1915235"
     CDS             <1..>50
                     /gene="Ssxb1"
                     /gene_synonym="4930414C09Rik"
                     /note="synovial sarcoma, X member B, breakpoint 1"
                     /codon_start=3
                     /product="synovial sarcoma, X member B1"
                     /protein_id="NP_080768.1"
                     /db_xref="CCDS:CCDS29997.1"
                     /db_xref="GeneID:67985"
                     /db_xref="MGI:MGI:1915235"
                     /translation="METVSSCEKVPMEVLYEPKNICKAFQDISTYFSDEEWGKLTQWQ
                     KSAYVYMKRNYIRMTDLGVTVNQPVFMRGKEQAKQSLVEGIEVHDSEDECFEGSFGVT
                     PIKRMKLTSVTISFHNVEGSLASGENDCNLAETGGIQVNVWSHRLRERKYRVIYSEIS
                     DTEEEEDDDY"
     exon            1..50
                     /gene="Ssxb1"
                     /gene_synonym="4930414C09Rik"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgaatgctt tgaaggatct tttggtgtga caccgataaa acgaatgaag
//
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