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Caenorhabditis elegans RNA-binding protein RO60 (rop-1), mRNA

NCBI Reference Sequence: NM_073237.9

FASTA Graphics 

LOCUS       NM_073237               2018 bp    mRNA    linear   INV 04-DEC-2024
DEFINITION  Caenorhabditis elegans RNA-binding protein RO60 (rop-1), mRNA.
ACCESSION   NM_073237
VERSION     NM_073237.9
DBLINK      BioProject: PRJNA158
KEYWORDS    RefSeq.
SOURCE      Caenorhabditis elegans
  ORGANISM  Caenorhabditis elegans
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
            Caenorhabditis.
REFERENCE   1  (bases 1 to 2018)
  AUTHORS   Sulson,J.E. and Waterston,R.
  CONSRTM   Caenorhabditis elegans Sequencing Consortium
  TITLE     Genome sequence of the nematode C. elegans: a platform for
            investigating biology
  JOURNAL   Science 282 (5396), 2012-2018 (1998)
   PUBMED   9851916
  REMARK    Erratum:[Science 1999 Jan 1;283(5398):35]
REFERENCE   2  (bases 1 to 2018)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2024) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 2018)
  AUTHORS   WormBase.
  CONSRTM   WormBase Consortium
  TITLE     Direct Submission
  JOURNAL   Submitted (17-OCT-2024) WormBase Group, European Bioinformatics
            Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org
REFERENCE   4  (bases 1 to 2018)
  AUTHORS   Sulson,J.E. and Waterston,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-MAR-2003) Nematode Sequencing Project: Sanger
            Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute
            at Washington University, St. Louis, MO 63110, USA
COMMENT     REVIEWED REFSEQ: This record has been curated by WormBase. This
            record is derived from an annotated genomic sequence (NC_003283).
            
            On May 27, 2020 this sequence version replaced NM_073237.8.
FEATURES             Location/Qualifiers
     source          1..2018
                     /organism="Caenorhabditis elegans"
                     /mol_type="mRNA"
                     /strain="Bristol N2"
                     /db_xref="taxon:6239"
                     /chromosome="V"
     gene            1..2018
                     /gene="rop-1"
                     /locus_tag="CELE_C12D8.11"
                     /db_xref="GeneID:179425"
                     /db_xref="WormBase:WBGene00004405"
     CDS             9..1940
                     /gene="rop-1"
                     /locus_tag="CELE_C12D8.11"
                     /standard_name="C12D8.11"
                     /note="Confirmed by transcript evidence"
                     /codon_start=1
                     /product="RNA-binding protein RO60"
                     /protein_id="NP_505638.1"
                     /db_xref="GeneID:179425"
                     /db_xref="WormBase:WBGene00004405"
                     /translation="MADELNEFQEAGNFNEEALMRLSNVCARLRRMQMLESDVEITVV
                     DGELKRVPRQMEKVKDGQVENNAGGFVFPVSDETQVRRFLILGSDKGSYHQSSEKITI
                     DNAQRIIKIIEQGNGHMVLKELALINAENRNPKMNAMIFTLAICARISTHDTTKKTEC
                     PMLNAYSDYIRALHDSALDLIPEVCRTPTHLFEFVDYCQTISESTKAGGAKSSTGWGR
                     SMRNAISKWYTTKTTEKLAMLLTKYPQREGWSHRDLFRLAHPNLMDSRSHGQSEDRLE
                     REQLFRFAVKGDLVKRKRKMSVEEVAEVEKVWDKKALKLPYTEEQLIKEEQSRALNLV
                     EAYLKLKNEQSEEVIVAAIKKHGLVREHLPTTSLNSKLVWETLFDVSMPMTAMIRNLA
                     KMTVVGALDEKRVDNIVKRLTDQEELRRSRIHPINLLTARAVYAQGRGDKGSLTWEPN
                     QKICDALEAGFYKAFVNAPPTGKRYCLALDVSGSMTSRVSSSPLSCREAATGMSLINL
                     HNEAEVRCVAFCDKLTELPFTKDWKIGQVNDYVNNLDFGRTDCGLPMTWATENNLKFD
                     VFIIYTDNDTWAGEIHPFEAIKKYREASGIHDAKVIVMAMQAYDYSIADPSDAGMLDI
                     TGFDSAVPQIVHEFVTGKI"
ORIGIN      
        1 aaccaatcat ggctgatgag ttgaatgaat tccaagaggc tggaaatttt aacgaggagg
       61 cattgatgag actctctaac gtctgcgccc gacttcgccg tatgcaaatg ctggaatctg
      121 atgttgagat tactgttgtc gatggtgaac tcaagagagt tcctcgtcaa atggagaaag
      181 tcaaggatgg tcaagtggag aataacgccg gaggattcgt ttttcctgta tctgatgaaa
      241 ctcaagttcg tcgcttcttg atcctcggtt ctgacaaagg aagctatcat cagtcgtctg
      301 aaaagatcac tatagacaac gctcaaagaa tcatcaaaat tattgagcag ggtaacggac
      361 atatggtttt gaaagagctg gcattgatca atgctgaaaa ccgtaatcca aagatgaacg
      421 caatgatctt cacattggca atttgtgctc gaatctctac tcatgacaca acgaagaaaa
      481 ctgaatgtcc aatgctcaat gcctactcag attatatccg agctcttcat gattcagcgc
      541 tcgatcttat tccggaggtt tgccgtacac caacccatct cttcgaattc gttgattatt
      601 gtcaaacaat ctctgaaagt actaaagcag gaggtgctaa atcttcaact ggatggggtc
      661 gttcaatgag aaacgccatc agcaaatggt ataccacaaa gacaactgaa aagttggcaa
      721 tgttgctcac aaaataccca caacgtgagg gatggtctca tcgcgatctt ttccgacttg
      781 ctcatcccaa tcttatggat agccgttctc atggccaaag cgaagatcgt cttgaaagag
      841 agcaattgtt ccgatttgcg gtcaagggag atttagtgaa aagaaagaga aagatgtctg
      901 tcgaggaagt tgctgaagtt gagaaggtct gggataagaa agcgttgaag cttccgtaca
      961 ccgaggaaca attaattaag gaagaacaga gcagagctct caacctcgtg gaagcgtacc
     1021 tcaagctcaa aaacgaacaa agcgaggaag tcatcgtagc agctatcaag aaacatggac
     1081 ttgtccgtga gcatctgcca actacaagtc tcaattcaaa acttgtatgg gaaacacttt
     1141 tcgatgtttc aatgccaatg actgctatga ttagaaatct tgcaaaaatg accgttgtgg
     1201 gcgcccttga tgagaagaga gttgacaata tcgtgaaacg tctcactgat caagaggagc
     1261 tgcgtcgttc tcgaattcat ccaataaatc ttctgactgc ccgtgctgtc tatgctcaag
     1321 gtcgtggtga caagggaagt ctcacttggg agccaaatca aaagatttgt gacgcccttg
     1381 aagctggctt ctacaaggca ttcgtgaatg caccaccaac tggaaaacga tactgcttgg
     1441 ctctcgatgt ttctggtagc atgacctctc gtgtcagttc gtcaccactc tcatgccgtg
     1501 aagctgctac cggaatgtct ttgatcaacc ttcacaatga agccgaagtt agatgtgtcg
     1561 ccttctgtga taagctcact gagcttccgt ttactaagga ttggaagatc ggacaagtta
     1621 atgactacgt taacaacctt gatttcggca gaacagattg tggccttcca atgacttggg
     1681 caacagaaaa taatctcaag tttgatgtct tcattatcta caccgacaac gatacctggg
     1741 ctggagagat tcatccattc gaagccatca aaaagtatcg tgaagcttct ggtattcatg
     1801 acgcgaaggt cattgtgatg gcaatgcagg catatgacta ctcgattgcc gatccatctg
     1861 atgctggtat gctcgacatt accggattcg attcggctgt accacagatt gttcacgagt
     1921 ttgttactgg aaagatctaa tttatagtac tgatctgtta tttatttcgc atgtttcttt
     1981 gttcatattt tgtcattcca taataaaaat acgaggat
//
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