LOCUS NM_179153 891 bp mRNA linear PLN 20-OCT-2022
DEFINITION Arabidopsis thaliana Cytochrome bd ubiquinol oxidase, 14kDa subunit
(AT4G32470), mRNA.
ACCESSION NM_179153
VERSION NM_179153.1
DBLINK BioProject: PRJNA116
BioSample: SAMN03081427
KEYWORDS RefSeq.
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 891)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 891)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (19-OCT-2022) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 891)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
REFERENCE 4 (bases 1 to 891)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
COMMENT REVIEWED REFSEQ: This record has been curated by TAIR and Araport.
This record is derived from an annotated genomic sequence
(NC_003075).
FEATURES Location/Qualifiers
source 1..891
/organism="Arabidopsis thaliana"
/mol_type="mRNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
gene 1..891
/locus_tag="AT4G32470"
/db_xref="Araport:AT4G32470"
/db_xref="GeneID:829382"
/db_xref="TAIR:AT4G32470"
CDS 100..405
/locus_tag="AT4G32470"
/inference="Similar to RNA sequence,
EST:INSD:EL334920.1,INSD:ES120765.1,INSD:EL038483.1,
INSD:EL326216.1,INSD:EH945665.1,INSD:ES113556.1,
INSD:EL325119.1,INSD:ES191480.1,INSD:EH924747.1,
INSD:DR318263.1,INSD:EL015653.1,INSD:EL025075.1,
INSD:EH874808.1,INSD:EL996627.1,INSD:EL126656.1,
INSD:EH887609.1,INSD:EL046849.1,INSD:EH916881.1,
INSD:EL339582.1,INSD:EH936917.1,INSD:DR318245.1,
INSD:ES137624.1,INSD:EH970490.1,INSD:EG422486.1,
INSD:EH944601.1,INSD:EL105214.1,INSD:EH851245.1,
INSD:EL260942.1,INSD:EH884802.1,INSD:EL267819.1,
INSD:ES068943.1,INSD:ES104539.1,INSD:ES103828.1,
INSD:EG422474.1,INSD:EH915933.1,INSD:EH922799.1,
INSD:EH845007.1,INSD:ES163695.1,INSD:EL136336.1,
INSD:EL285947.1,INSD:ES045630.1,INSD:EL032469.1,
INSD:EH869607.1,INSD:EL064600.1,INSD:EL295995.1,
INSD:AI099588.1,INSD:ES110988.1,INSD:EH835629.1,
INSD:ES002588.1,INSD:ES186192.1,INSD:AA721891.1,
INSD:EL297881.1,INSD:EL041320.1,INSD:ES175470.1,
INSD:EH967330.1,INSD:EH893819.1,INSD:EL151172.1,
INSD:EH800496.1,INSD:EH839516.1,INSD:EL040215.1,
INSD:EL256941.1,INSD:EL230830.1,INSD:EL275778.1,
INSD:ES062224.1,INSD:ES082317.1,INSD:ES175426.1,
INSD:ES206119.1,INSD:EL059139.1,INSD:EL266778.1,
INSD:EL193785.1,INSD:EL162183.1,INSD:ES169971.1,
INSD:EL129797.1,INSD:EH871612.1,INSD:BP806167.2,
INSD:EL341190.1,INSD:EL317077.1,INSD:EL061910.1,
INSD:EL981178.1,INSD:ES120734.1,INSD:ES201687.1,
INSD:EL060762.1,INSD:EL171217.1,INSD:T88351.1,
INSD:BP585545.1,INSD:EL071720.1,INSD:EL341784.1,
INSD:EH974956.1,INSD:ES088044.1,INSD:EL055127.1,
INSD:EL102341.1,INSD:EH975333.1,INSD:EL052131.1,
INSD:ES059708.1,INSD:EL145549.1,INSD:ES043008.1,
INSD:EH812460.1,INSD:ES061831.1,INSD:EL231337.1,
INSD:EL289391.1,INSD:EL130323.1,INSD:EL035692.1,
INSD:AV545373.1,INSD:ES068899.1,INSD:EL103003.1,
INSD:R64854.1,INSD:EH963706.1,INSD:EL229335.1,
INSD:EH940991.1,INSD:EL213784.1,INSD:EH845416.1,
INSD:EL981345.1,INSD:ES168062.1,INSD:EL059253.1,
INSD:EH882612.1,INSD:EH828543.1,INSD:ES212885.1,
INSD:EL025081.1,INSD:EL989075.1,INSD:EL975821.1,
INSD:BP861117.1,INSD:EL201941.1,INSD:EH911672.1,
INSD:EL302268.1,INSD:EL232719.1,INSD:T88546.1,
INSD:EL196026.1,INSD:EL983176.1,INSD:EL134642.1,
INSD:EH899658.1,INSD:EH949418.1,INSD:ES024512.1,
INSD:ES184717.1,INSD:ES069078.1,INSD:EL118798.1,
INSD:EL156811.1,INSD:EH982379.1,INSD:EH933648.1,
INSD:EL226653.1,INSD:EH828828.1,INSD:EL989358.1,
INSD:EH841201.1,INSD:EL988091.1,INSD:EH829856.1,
INSD:ES063920.1,INSD:DR318270.1,INSD:EL044174.1,
INSD:EH869528.1,INSD:AI099765.1,INSD:EH814318.1,
INSD:EL013780.1,INSD:EL204066.1,INSD:BP847602.2"
/note="Cytochrome bd ubiquinol oxidase, 14kDa subunit;
FUNCTIONS IN: ubiquinol-cytochrome-c reductase activity;
INVOLVED IN: mitochondrial electron transport, ubiquinol
to cytochrome c; LOCATED IN: mitochondrion, plasma
membrane, plastid, mitochondrial respiratory chain complex
III, membrane; EXPRESSED IN: 26 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro
DOMAIN/s: Cytochrome d ubiquinol oxidase, 14kDa subunit
(InterPro:IPR003197); BEST Arabidopsis thaliana protein
match is: Cytochrome bd ubiquinol oxidase, 14kDa subunit
(TAIR:AT5G25450.1); Has 312 Blast hits to 312 proteins in
91 species: Archae - 0; Bacteria - 0; Metazoa - 204; Fungi
- 3; Plants - 89; Viruses - 0; Other Eukaryotes - 16
(source: NCBI BLink)."
/codon_start=1
/product="Cytochrome bd ubiquinol oxidase, 14kDa subunit"
/protein_id="NP_849484.1"
/db_xref="GeneID:829382"
/db_xref="TAIR:AT4G32470"
/db_xref="Araport:AT4G32470"
/translation="MASLLKAFIDPKKNFLARMHMKAISTRLRRYGLRYDDLYDQYYS
MDIKEAMNRLPREVVDARNQRLKRAMDLSMKHEYLPKDLQAVQTPFRGYLQDMLALG"
ORIGIN
1 atttcctctc tcaggtcagg agttgttgta gacacagcag cttggtctct ttcattggca
61 caaagagaga aaatctgaaa ttgagagaga cagagaaaaa tggcgtcgct tctgaaagca
121 ttcatcgatc caaagaagaa cttcctcgct cgtatgcata tgaaagccat atctactcgc
181 cttcgcagat acggtctgag gtacgatgat ctgtacgatc agtattacag tatggacatc
241 aaagaggcta tgaacagatt gcccagggag gtcgttgatg ctcgtaacca gcgtctcaag
301 cgtgccatgg acctctccat gaagcacgag tacctcccca aggatcttca ggcggtgcag
361 accccattcc gtggctatct tcaggacatg cttgctcttg gttgagaggg aaagcaagga
421 acgagaggcc ttgggagctc taccactata ccagcgcaca ctcccataag cattcctttc
481 cccttttctt gtggtcaacg ctgcttctct gcataaatct gcaacattga tattttggtg
541 ctcactttct gaacagagct atttactatt tgaaaaagca taaatctgtg atagttttcc
601 taagtggata tgttgctagt tacattttta tcgcttttgc tggcttgaat aaaatcgacg
661 acgcaactca agtctgtctc gatgatttat cattttcgag gtctggtttg ctcttttatt
721 cttataattg gtctctcaga atcgtttaag ttttatgcat tgaaatgtag aagtgccatg
781 attccatatt cttgggaatt tggtcgagcc atgttgatgt atcctttgca ttgacagttt
841 catgtgagaa attaatggga gagaattatg agtttattag gcaccgataa a
//