U.S. flag

An official website of the United States government

Homo sapiens long intergenic non-protein coding RNA 1312 (LINC01312), long non-coding RNA

NCBI Reference Sequence: NR_027030.1

FASTA Graphics 

LOCUS       NR_027030               3517 bp    RNA     linear   PRI 06-SEP-2020
DEFINITION  Homo sapiens long intergenic non-protein coding RNA 1312
            (LINC01312), long non-coding RNA.
ACCESSION   NR_027030 NR_027029
VERSION     NR_027030.1
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 3517)
  AUTHORS   Feenstra B, Geller F, Krogh C, Hollegaard MV, Gortz S, Boyd HA,
            Murray JC, Hougaard DM and Melbye M.
  TITLE     Common variants near MBNL1 and NKX2-5 are associated with infantile
            hypertrophic pyloric stenosis
  JOURNAL   Nat. Genet. 44 (3), 334-337 (2012)
   PUBMED   22306654
  REMARK    Publication Status: Online-Only
COMMENT     PREDICTED REFSEQ: This record has not been reviewed and the
            function is unknown. The reference sequence was derived from
            AL137011.9.
            
            On May 18, 2011 this sequence version replaced NR_027029.1.
            
            Sequence Note: The RefSeq transcript was derived from the reference
            genome assembly. The genomic coordinates were determined from
            alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC032958.2, BG718545.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA1968968, SAMEA2148874
                                           [ECO:0000348]
            ##Evidence-Data-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-589               AL137011.9         53919-54507
            590-721             AL137011.9         70365-70496
            722-3517            AL137011.9         83969-86764
FEATURES             Location/Qualifiers
     source          1..3517
                     /organism="Homo sapiens"
                     /mol_type="transcribed RNA"
                     /db_xref="taxon:9606"
                     /chromosome="6"
                     /map="6q23.2"
     gene            1..3517
                     /gene="LINC01312"
                     /note="long intergenic non-protein coding RNA 1312"
                     /db_xref="GeneID:154089"
                     /db_xref="HGNC:HGNC:28525"
     ncRNA           1..3517
                     /ncRNA_class="lncRNA"
                     /gene="LINC01312"
                     /product="long intergenic non-protein coding RNA 1312"
                     /db_xref="GeneID:154089"
                     /db_xref="HGNC:HGNC:28525"
     exon            1..589
                     /gene="LINC01312"
                     /inference="alignment:Splign:2.1.0"
     exon            590..721
                     /gene="LINC01312"
                     /inference="alignment:Splign:2.1.0"
     exon            722..3517
                     /gene="LINC01312"
                     /inference="alignment:Splign:2.1.0"
     regulatory      3176..3181
                     /regulatory_class="polyA_signal_sequence"
                     /gene="LINC01312"
                     /note="hexamer: AATAAA"
     polyA_site      3200
                     /gene="LINC01312"
                     /note="major polyA site"
ORIGIN      
        1 gtggaacacc aagacaagtg gctagaaacc ttgtacatga aaacagcggc ccacccaaag
       61 tttgtctttt cctaggaagt tatagagaaa tgaggaggta acagaagagc agtcaataaa
      121 agaaaaattt ctttaaaaga catatgggtg ggatgagaac gaatgattct tactttatct
      181 gtagaaattg aattttgctg caactaagag agacctcgaa aatagtgatt tacacaaata
      241 aaattttgtt ccatcaagaa aactgatatt cagcagtcca ggctgatgca gtggcttcaa
      301 gagctcttca gcaacccagg caccttccag gtcttctttc ccaattctag tgctagtaac
      361 tccttcatct catcacccaa catggctacc agagctccag acatcacgtg tacatctgag
      421 ttccaggaaa ccagacagag ggagaaaaga agggcatgca cgctcacttt aaagaagact
      481 tctaagaaga accacctaaa attccccaac ctagtcccaa agctcacttg gctgctttca
      541 agcctggaaa atgcagtctt taagctgaaa aatgctatga caaaatcaga gattgatcat
      601 gcctacaatg acaactggaa aacagaaatg aaaccatata agccaagcac tcacgcaatc
      661 tttgtcctcc cagttgactt aagaacactt gtgaagaaaa tgtggcgtct ttagatctca
      721 gatcccttgt ttccaactgg ttcaaataaa tagacaactc ttcattccga tggtacttct
      781 tagagataaa ccacatgcat gtatcagaga aaacaactct cagcctggta aatgaacagg
      841 aaaaacttgg gttagaattc tatttctttc aaggtagaga gcaaattttc ataatctcac
      901 atggacatac agaccaagcc atgcatggca ctatctacat aatcaaggcg gagaacacaa
      961 aaacttggat atgaatgttc acagcagcat tattcataat agtcaaaaaa tggaaacaac
     1021 cgaaatgccc accaactgat gcatgaataa acaaaatgca gtgcatccat tcaatggaat
     1081 attattcagc cattaaaaag gataaattac tgatacatgc tacaacatgt atgaacttca
     1141 aaaacatatg ctaagtgaaa gaagccagcc atcaaggacc acaaattgta ttattcaatt
     1201 tatatgaaat tctaaagtag gcaaatctgc aaagacaaaa tagtttagtg gttgtatagg
     1261 gctggggtca ggagaggaga ataggagtga ctgccagtga gcaagaggtt tctggtgaaa
     1321 acatggagag gaggcttgaa taattatctg aggttagatt tgttatctgg aggcaccatt
     1381 acctacttaa tttcctacac aactcaaatt cactagaaaa ctactgttgg ctgtactttt
     1441 ttgataatgt aattcctgta tttcaaaact gtttttaagg gttttcttaa tctctccctt
     1501 aaaaaacaaa tactgagaca gttacaaagt aaaatacact ttttaaaatt ttactttcaa
     1561 aagaagataa tcaaaagtga tacaatcatc acaattggca ttaaattatt gttttgatct
     1621 taatatttta ttccccattc atttgctgtt cctttttgtc tgttctaatg ctataataac
     1681 ttacctcagc tttaacaaaa tgaaactttg ttttcatgct ttattaacct gaagctaata
     1741 attttacctt aggtgttatc aaaaagtgac ttatttttag gatgttaata tctcaaacaa
     1801 cagtgttatg ctctgccacc taccaaactc tggagtgaga aaatccaatc agtttaaccg
     1861 accttgcaca attaaaccat caaatacatt ccatatgcgg gcttgttggc tcgtgcctgt
     1921 aatcccagca ctttgggagg tcgaggcagg tggatcgctt gagcccagga cttcaagacc
     1981 agcctaggca acatggtgaa accctgtctt ttctaaaaat acaaaaatta gccaaccgtg
     2041 atagtgtgct cctgggaagg ctaaggtggg agaatccttg aggccaggag gttgaggctg
     2101 cagtgagctg tgattgcacc actgcacttt agtctgggtg acagagcaag accctgtctc
     2161 aaacaaacaa aaaatctata atggaaaact tagaaatcta attggataat cctaagaaac
     2221 tccctcctgc tcctagttcc tccctcaagt tctctaaaag gttcaggaaa caattataac
     2281 actgacatct aaatgtaatt tgtaaagtat ttcttatgtt ctccctggta ttctccttaa
     2341 aatcatccta gctttcccag aacctagaca atattgtctt ctagttaaaa ttttcatatg
     2401 ctgatgtttt ctgccatttc tgtttggcag aaaagcaaac tggaaaactt gataaacaag
     2461 aaagacctca agtaacaaaa attatatgtc attcttggct caactaacag ctccaaacct
     2521 ctgaaatgtg gtagatcttt ttccaaagga agatcttact aactctcagt gtaaatctgt
     2581 accttaactt tatcactgtt taaaacccat ctctaaataa cataggccaa gatctccaaa
     2641 atcgataatg gggaaactgc tcaacagcat tccagaagtt cttaaccata agagtgatgc
     2701 tatagtagaa agtaaaccgt gaggcatcat gcatcttgac tgaaaattcc accccacacc
     2761 cactgagcta atctggagcc gccatagaag acagggaagt tggaagtaga gacctttgcg
     2821 taggccatca cccctcgcca tcaatcaaaa ggaattctgt gagcttctac tgagagccta
     2881 gagctctggt cagcagcaca aagacagagc caggcagaaa caactccaga gccacacctc
     2941 ctctgaaaga caattgtcag gtgagatttt caaataaaac cactggggat tatccactat
     3001 ctccccaaga aattcaaatg tttagaaata taaacacaac acatactttt tttcagtatt
     3061 ttataaagtt caacagtttt gatgataatc acatgtatgc caaatgattt gtaaagtgta
     3121 aaatttgaaa aagatcagat attaaataac aaattgaatg agaaaatacg acaacaataa
     3181 aaaaaagttt tatgaatgga ctaccagttt ttgctttttt gaaaagaaat attacaataa
     3241 ggttatttgc tcaaataaaa cctacctgac actcttgcaa atgtttaggg agggaaagtg
     3301 tgtctccctt tatatttact gtttctctct gaagccaatt tcattttttt caacatcctg
     3361 gccatctgca ttcatataaa gtggttattt tcatggataa ttcaccttat atatgaaata
     3421 taaaaggtat ctggaataaa ttcattgcaa aattgatgtt acctgttaaa tcttcctagt
     3481 agtttgtttt caccaaaata aaatgagtga gatttac
//
Feature
Display: FASTA GenBank Help
Details

Supplemental Content

Change region shown

Customize view

More about the LINC01312 gene

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
External link. Please review our privacy policy.