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NCBI Reference Sequence: NZ_JBKEPB010000039.1
FASTA Graphics
LOCUS NZ_JBKEPB010000039 23752 bp DNA linear CON 02-JAN-2025 DEFINITION Pseudomonas aeruginosa strain 1LPIR24 NODE_39_length_23752_cov_87.208170, whole genome shotgun sequence. ACCESSION NZ_JBKEPB010000039 NZ_JBKEPB010000000 VERSION NZ_JBKEPB010000039.1 DBLINK BioProject: PRJNA224116 BioSample: SAMN45910416 Assembly: GCF_046449985.1 KEYWORDS WGS; RefSeq. SOURCE Pseudomonas aeruginosa ORGANISM Pseudomonas aeruginosa Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas. REFERENCE 1 (bases 1 to 23752) AUTHORS Aslanov,B. TITLE Klebsiella pneumoniae and Pseudomonas aeruginosa (Russia) JOURNAL Unpublished REFERENCE 2 (bases 1 to 23752) AUTHORS Aslanov,B. TITLE Direct Submission JOURNAL Submitted (23-DEC-2024) department of epidemiology, North-Western State Medical University named after I.I. Mechnikov, Kirochnaya st. 41, Saint-Petersburg 191015, Russia COMMENT REFSEQ INFORMATION: The reference sequence is identical to JBKEPB010000039.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SPAdes v. 3.15.4 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 30x Sequencing Technology :: BGI ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_046449985.1-RS_2025_01_01 Annotation Date :: 01/01/2025 12:55:21 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,777 CDSs (total) :: 6,718 Genes (coding) :: 6,239 CDSs (with protein) :: 6,239 Genes (RNA) :: 59 rRNAs :: 1, 1, 2 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) partial rRNAs :: 1 (23S) tRNAs :: 51 ncRNAs :: 4 Pseudo Genes (total) :: 479 CDSs (without protein) :: 479 Pseudo Genes (ambiguous residues) :: 0 of 479 Pseudo Genes (frameshifted) :: 17 of 479 Pseudo Genes (incomplete) :: 461 of 479 Pseudo Genes (internal stop) :: 5 of 479 Pseudo Genes (multiple problems) :: 4 of 479 CRISPR Arrays :: 2 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..23752 /organism="Pseudomonas aeruginosa" /mol_type="genomic DNA" /submitter_seqid="NODE_39_length_23752_cov_87.208170" /strain="1LPIR24" /host="Homo sapiens" /db_xref="taxon:287" /geo_loc_name="Russia" /collection_date="2024" /collected_by="NWSMU named after I.I. Mechnikov" gene 2..703 /gene="pchC" /locus_tag="ACLBUO_RS05620" /old_locus_tag="ACLBUO_05620" CDS 2..703 /gene="pchC" /locus_tag="ACLBUO_RS05620" /old_locus_tag="ACLBUO_05620" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_252919.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="pyochelin biosynthesis editing thioesterase PchC" /protein_id="WP_410156879.1" /translation="MACFPHAGGSASFFRSWSERLPPDIDLLALQYPGREDRFNEAPA TRLEDLADGAALALRDFADAPLALFGHSLGAALAYETALRLESAGAPLRHLFVSAHPA PHRQRGGALHRGDEAALLEDVRRQGGASELLEDADLRALFLPILRADYQAIETYRRAQ PIALACALDVLLGEHDEEVSAAEAQAWSDASRTPARLRRFPGGHFYLSEGRDAVIEHL LRRLAHPDALSREVA" gene 703..1008 /gene="pchB" /locus_tag="ACLBUO_RS05625" /old_locus_tag="ACLBUO_05625" CDS 703..1008 /gene="pchB" /locus_tag="ACLBUO_RS05625" /old_locus_tag="ACLBUO_05625" /EC_number="4.2.99.21" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_252920.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="isochorismate lyase PchB" /protein_id="WP_003106950.1" /translation="MKTPEDCTGLADIREAIDRIDLDIVQALGRRMDYVKAASRFKAS EAAIPAPERVAAMLPERARWAEENGLDAPFVEGLFAQIIHWYIAEQIKYWRQTRGAA" gene 1005..2435 /gene="pchA" /locus_tag="ACLBUO_RS05630" /old_locus_tag="ACLBUO_05630" CDS 1005..2435 /gene="pchA" /locus_tag="ACLBUO_RS05630" /old_locus_tag="ACLBUO_05630" /EC_number="5.4.4.2" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_252921.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="isochorismate synthase PchA" /protein_id="WP_003114686.1" /translation="MSRLAPLSQCLHALRGTFERAIGQAQALDRPVLVAASFEIDPLD PLQVFGAWDDRQTPCLYWEQPELAFFAWGCALELQGHGEQRFARIEENWQLLCADAVV EGPLAPRLCGGFRFDPRGPREEHWQAFADASLMLAGITVLREGERYRVLCQHLAKPGE DALALAAYHCSALLRLRQPARRRPSGPTAGAQGDASAQERRQWEAKVSDAVSSVRQGR FGKVVLARTQARPLGDIEPWQVIEHLRLQHADAQLFACRRGNACFLGASPERLVRIRA GEALTHALAGTIARGGDAQEDARLGQALLDSAKDRHEHQLVVEAIRTALEPFSEVLEI PDAPGLKRLARVQHLNTPIRARLADAGGILRLLQALHPTPAVGGYPRSAALDYIRQHE GMDRGWYAAPLGWLDGEGNGDFLVALRSALLTPGRGYLFAGCGLVGDSEPAHEYRETC LKLSAMREALSAIGGLDEVPLQRGVA" gene complement(2524..3021) /gene="ssb" /locus_tag="ACLBUO_RS05635" /old_locus_tag="ACLBUO_05635" CDS complement(2524..3021) /gene="ssb" /locus_tag="ACLBUO_RS05635" /old_locus_tag="ACLBUO_05635" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_252922.1" /GO_function="GO:0003697 - single-stranded DNA binding [Evidence IEA]" /GO_process="GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]; GO:0006351 - DNA-templated transcription [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="single-stranded DNA-binding protein" /protein_id="WP_003114685.1" /translation="MARGVNKVILVGNVGGDPETRYMPNGNAVTNITLATSESWKDKQ TGQQQERTEWHRVVFFGRLAEIAGEYLRKGSQVYVEGSLRTRKWQGQDGQDRYTTEIV VDINGNMQLLGGRPSGDDSQRAPREPMQRPQQAPQQQSRPAPQQQPAPQPAQDYDSFD DDIPF" gene complement(3038..4426) /locus_tag="ACLBUO_RS05640" /old_locus_tag="ACLBUO_05640" CDS complement(3038..4426) /locus_tag="ACLBUO_RS05640" /old_locus_tag="ACLBUO_05640" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_252923.1" /GO_function="GO:0022857 - transmembrane transporter activity [Evidence IEA]" /GO_process="GO:0055085 - transmembrane transport [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="MFS transporter" /protein_id="WP_003103910.1" /translation="MHDSHTERMSGTETRAAVGLSLVFAFRMLGMFMVLPVLATYGQD LAGATPALIGLAIGAYGLTQAILQIPFGTISDRIGRRPVIVVGLLIFAAGAALAANAD SIWGVIAGRVLQGAGAISAAVMALLSDLTREQHRTKAMAMIGMSIGVSFAVAMVLGPV LTHLFGLHGLFWFTAGMALVGLLLILFFVPQPDHMTQHRESSVARQALLPTLKHGDLL RLDAGILILHAILMASFVALPLALVHEGGLPKEQHWWVYLTALLVGFFGMVPFIIYAE KKRRMKRVLTGAVATLLACELFFLVFGHSLAMLVVGTVVFFTAFNLLEASLPSLVSKV SPAGGKGTAMGVYSTSQFLGAALGGILGGWMFQHGGLSMVFIGCAVLAALWLAIAVTM REPPYVTSIRLPLAPAALQDAVLVQRFRALPGVADAVVVAEEAAAYVKVDTQQVDRTA LERLAQAAPGGC" gene 4640..7477 /gene="uvrA" /locus_tag="ACLBUO_RS05645" /old_locus_tag="ACLBUO_05645" CDS 4640..7477 /gene="uvrA" /locus_tag="ACLBUO_RS05645" /old_locus_tag="ACLBUO_05645" /EC_number="3.1.25.-" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_252924.1" /GO_function="GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]" /GO_process="GO:0006289 - nucleotide-excision repair [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="excinuclease ABC subunit UvrA" /protein_id="WP_003093663.1" /translation="MDKILIRGARTHNLKNVDLTLPRDKLIVITGLSGSGKSSLAFDT LYAEGQRRYVESLSAYARQFLSMMEKPDVDTIEGLSPAISIEQKSTSHNPRSTVGTIT EIYDYLRLLYARVGTPRCPDHDIPLEAQTVSQMVDQVLALPEGSKLMLLAPVIRERKG EHLAVFDEMRAQGFVRARVDGKLYELDEVPKLDKQKKHSIDVVVDRFKVRADLQQRLA ESFETALSLADGIALVAPMDEDEDVEEIIFSARFACPVCGHSISELEPKLFSFNNPAG ACPTCDGLGVKQFFDARRVVNGELTLAEGAIRGWDRRNVYYFQMLGSLAQHYGFSLEE PFDELGAEHQKVVLYGSGRENVDFRYLNDRGDIVKRSHPFEGILPNLERRYRETESAT VREELAKFLSTQPCPDCHGTRLRREARHVWVGDRTLPAITAMPVGEACEYAAGLSLTG RRGEIAAKILKEIRDRLQFLVNVGLDYLTLDRSADTLSGGEAQRIRLASQIGAGLVGV MYILDEPSIGLHQRDNERLLGTLTHLRNLGNTVIVVEHDEDAIRLADYVVDIGPGAGV HGGQVVAEGTPDQVMNHPDSLTGKYLSGRKKIAVPAKRTPRDKKKLLKLKGARGNNLQ NVNLEIPVGLFTCITGVSGSGKSTLINNTLFPITATALNGATTLEVAPYDSFDGLQHL DKVVDIDQSPIGRTPRSNPATYTGLFTPIRELFSGVPEARSRGYGPGRFSFNVKGGRC EACQGDGVIKVEMHFLPDIYVPCDVCKGKRYNRETLEIRYKGKSIHEVLEMTIEEARE FFDAVPALARKLQTLMDVGLSYIKLGQSATTLSGGEAQRVKLSRELSKRDTGKTLYIL DEPTTGLHFADIQQLLDVLHRLRDHGNTVVVIEHNLDVIKTADWLVDLGPEGGSKGGQ IIANGTPEQVAEMPQSHTGHFLKPLLERDRA" gene complement(7548..8012) /gene="bfr" /locus_tag="ACLBUO_RS05650" /old_locus_tag="ACLBUO_05650" CDS complement(7548..8012) /gene="bfr" /locus_tag="ACLBUO_RS05650" /old_locus_tag="ACLBUO_05650" /EC_number="1.16.3.1" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_252925.1" /GO_function="GO:0008199 - ferric iron binding [Evidence IEA]; GO:0004322 - ferroxidase activity [Evidence IEA]" /GO_process="GO:0006879 - intracellular iron ion homeostasis [Evidence IEA]; GO:0006880 - intracellular sequestering of iron ion [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="bacterioferritin" /protein_id="WP_003093668.1" /translation="MQGHPEVIDYLNTLLTGELAARDQYFIHSRMYEDWGFSKLYERL NHEMEEETQHADALLRRILLLEGTPRMRPDDIHPGTTVPEMLEADLKLERHVRAALAK GIALCEQHKDFVSRDILKAQLADTEEDHAYWLEQQLGLIARMGLENYLQSQI" gene complement(8143..9591) /gene="katA" /locus_tag="ACLBUO_RS05655" /old_locus_tag="ACLBUO_05655" CDS complement(8143..9591) /gene="katA" /locus_tag="ACLBUO_RS05655" /old_locus_tag="ACLBUO_05655" /EC_number="1.11.1.6" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_252926.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="catalase KatA" /protein_id="WP_003103909.1" /translation="MEEKTRLTTAAGAPVVDNQNVQTAGPRGPMLLQDVWFLEKLAHF DREVIPERRMHAKGSAAYGTFTVTHDITPYTRAKIFSQVGKKTDMFLRFSTVAGERGA ADAERDIRGFSMRFYTEQGNWDLVGNNTPVFYLRDPLKFPDLNHVVKRDPRTNLRNAT FKWDFFSHLPESLHQLTIDFSDRGLPKSYRHIHGFGSHTFSFINANNERFWVKFHFKT QQGIENLTNAEAAEVIAQDRESSQRDLYESIEKGDFPRWKMYVQIMPEKEAATYRYNP FDLTKVWPHGDYPLIEVGFFELNRNPDNYFAEVEQAAFTPANVVPGIGFSPDKMLQGR LFSYGDAHRYRLGVNHHQIPVNAARCPHQVYHRDGGMRVDGNNAHQRVTYEPNSFNQW QEQPDFSEPPLSLEGAADHWNHRVDDDYYSQPAALFHLFTDEQKQRLFANIAEDIRDV PEQIQRRQIGLFLKVDPAYGKGVADALGLKLD" gene complement(9873..10262) /gene="rplQ" /locus_tag="ACLBUO_RS05660" /old_locus_tag="ACLBUO_05660" CDS complement(9873..10262) /gene="rplQ" /locus_tag="ACLBUO_RS05660" /old_locus_tag="ACLBUO_05660" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_252927.1" /GO_component="GO:0005840 - ribosome [Evidence IEA]" /GO_function="GO:0003735 - structural constituent of ribosome [Evidence IEA]" /GO_process="GO:0006412 - translation [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="50S ribosomal protein L17" /protein_id="WP_003093672.1" /translation="MRHRKSGRHLSRTSAHRKAMFQNMAVSLFEHELIKTTLPKAKEL RRVAEPLITLAKEDSVANRRLAFDRTRSKAAVGKLFNDLGKRYANRPGGYLRILKCGF RAGDNAPMAYVELVDRPVGGEVVEAAE" gene complement(10306..11307) /locus_tag="ACLBUO_RS05665" /old_locus_tag="ACLBUO_05665" CDS complement(10306..11307) /locus_tag="ACLBUO_RS05665" /old_locus_tag="ACLBUO_05665" /EC_number="2.7.7.6" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_252928.1" /GO_function="GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]" /GO_process="GO:0006351 - DNA-templated transcription [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="DNA-directed RNA polymerase subunit alpha" /protein_id="WP_003093675.1" /translation="MQSSVNEFLTPRHIDVQVVSQTRAKITLEPLERGFGHTLGNALR RILLSSMPGCAVVEAEIDGVLHEYSAIEGVQEDVIEILLNLKGLAIKLHGRDEVTLTL AKKGSGVVTAADIQLDHDVEIINGDHVIANLADNGALNMKLKVARGRGYEPADARQSD EDESRSIGRLQLDASFSPVRRVSYVVENARVEQRTNLDKLVLDLETNGTLDPEEAIRR AATILQQQLAAFVDLKGDSEPVVEEQEDEIDPILLRPVDDLELTVRSANCLKAENIYY IGDLIQRTEVELLKTPNLGKKSLTEIKDVLASRGLSLGMRLDNWPPASLKKDDKATA" gene complement(11330..11950) /gene="rpsD" /locus_tag="ACLBUO_RS05670" /old_locus_tag="ACLBUO_05670" CDS complement(11330..11950) /gene="rpsD" /locus_tag="ACLBUO_RS05670" /old_locus_tag="ACLBUO_05670" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_252929.1" /GO_component="GO:0015935 - small ribosomal subunit [Evidence IEA]" /GO_function="GO:0019843 - rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]" /GO_process="GO:0006412 - translation [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="30S ribosomal protein S4" /protein_id="WP_003093678.1" /translation="MARYIGPKCKLSRREGTDLFLKSGARALDSKCKAENVPGQHGQR RGRLSDYGLQLREKQKVRRIYGVLERQFRGYYQEASRRKGSTGENLLQLLECRLDNVV YRMGFGSTRSESRQLVSHKAITVNGQTVNIPSYQVKAGDVVAVREKSKNQLRIAQALE LCGQRGRVEWVEVDLDKKAGTFKSAPARSDLSADINENLIVELYSK" gene complement(11967..12356) /gene="rpsK" /locus_tag="ACLBUO_RS05675" /old_locus_tag="ACLBUO_05675" CDS complement(11967..12356) /gene="rpsK" /locus_tag="ACLBUO_RS05675" /old_locus_tag="ACLBUO_05675" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_001029758.1" /GO_component="GO:0005840 - ribosome [Evidence IEA]" /GO_function="GO:0003735 - structural constituent of ribosome [Evidence IEA]" /GO_process="GO:0006412 - translation [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="30S ribosomal protein S11" /protein_id="WP_003093689.1" /translation="MAKPAARPRKKVKKTVVDGIAHIHASFNNTIVTITDRQGNALSW ATSGGSGFRGSRKSTPFAAQVAAERAGQAALEYGLKNLDVNVKGPGPGRESAVRALNA CGYKIASITDVTPIPHNGCRPPKKRRV" gene complement(12375..12731) /gene="rpsM" /locus_tag="ACLBUO_RS05680" /old_locus_tag="ACLBUO_05680" CDS complement(12375..12731) /gene="rpsM" /locus_tag="ACLBUO_RS05680" /old_locus_tag="ACLBUO_05680" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_252931.1" /GO_component="GO:0005840 - ribosome [Evidence IEA]" /GO_function="GO:0003723 - RNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]" /GO_process="GO:0006412 - translation [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="30S ribosomal protein S13" /protein_id="WP_003093692.1" /translation="MARIAGVNIPDNKHTVISLTYIYGVGRTTAQSICAATGVNPAAK IKDLSDEQIDQLRNEVAKITTEGDLRREINMNIKRLMDLGCYRGLRHRRGLPVRGQRT KTNARTRKGPRKPIRK" gene complement(12862..12978) /gene="rpmJ" /locus_tag="ACLBUO_RS05685" /old_locus_tag="ACLBUO_05685" CDS complement(12862..12978) /gene="rpmJ" /locus_tag="ACLBUO_RS05685" /old_locus_tag="ACLBUO_05685" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_006232360.1" /GO_component="GO:0005840 - ribosome [Evidence IEA]" /GO_function="GO:0003735 - structural constituent of ribosome [Evidence IEA]" /GO_process="GO:0006412 - translation [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="50S ribosomal protein L36" /protein_id="WP_003093693.1" /translation="MKVRASVKKLCRNCKIIRRDGIVRVICSAEPRHKQRQG" gene complement(13007..14335) /gene="secY" /locus_tag="ACLBUO_RS05690" /old_locus_tag="ACLBUO_05690" CDS complement(13007..14335) /gene="secY" /locus_tag="ACLBUO_RS05690" /old_locus_tag="ACLBUO_05690" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_252933.1" /GO_component="GO:0016020 - membrane [Evidence IEA]" /GO_process="GO:0015031 - protein transport [Evidence IEA]; GO:0043952 - protein transport by the Sec complex [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="preprotein translocase subunit SecY" /protein_id="WP_023102833.1" /translation="MAKQGALSALSNGGLSELWARLRFLFLAIIVYRIGAHIPVPGIN PDRLAALFRQNEGTILSLFNMFSGGALERMSIFALGIMPYISASIIMQLMTAISPQLE QLKKEGESGRRKISQYTRYGTVVLALVQAIGMSVGLGSQGVAFSNDFGFYFVAVTTFV AGAMFMMWLGEQITERGVGNGISMLIFAGIVAGLPRAIGQSFESARQGDINIFALIGV GLLAVAIIAFVVFIERGQRRIAVHYAKRQQGRKVFAAQTSHLPLKVNMAGVIPAIFAS SILLFPASLGSWFGQSEGLGWLQDIAQAIAPGQPLNILLFTAGIVFFCFFYTALMFNP KDVAENLKKSGAFIPGIRPGEQSARYIDGVLTRLTMFGALYMTAVCLLPQFLVVAAHV PFYLGGTSLLIVVVVVMDFMAQVQSHLVSHQYESLMKKANLKGYGSGMLR" gene complement(14336..14770) /gene="rplO" /locus_tag="ACLBUO_RS05695" /old_locus_tag="ACLBUO_05695" CDS complement(14336..14770) /gene="rplO" /locus_tag="ACLBUO_RS05695" /old_locus_tag="ACLBUO_05695" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_003255461.1" /GO_component="GO:0015934 - large ribosomal subunit [Evidence IEA]" /GO_function="GO:0003735 - structural constituent of ribosome [Evidence IEA]" /GO_process="GO:0006412 - translation [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="50S ribosomal protein L15" /protein_id="WP_015502295.1" /translation="MQLNDLRSAPGARREKHRPGRGIGSGLGKTGGRGHKGLTSRSGG KVAPGFEGGQQPLHRRLPKFGFVSLKAMDRAEVRTSELAKVEGDVVSLQTLKDANLIN QHVQRVKVMLSGEVGRAVTLKGIAATKGARAAIEAVGGKFED" gene complement(14774..14950) /gene="rpmD" /locus_tag="ACLBUO_RS05700" /old_locus_tag="ACLBUO_05700" CDS complement(14774..14950) /gene="rpmD" /locus_tag="ACLBUO_RS05700" /old_locus_tag="ACLBUO_05700" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_252935.1" /GO_component="GO:0015934 - large ribosomal subunit [Evidence IEA]" /GO_function="GO:0003735 - structural constituent of ribosome [Evidence IEA]" /GO_process="GO:0006412 - translation [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="50S ribosomal protein L30" /protein_id="WP_003093696.1" /translation="MATVKVTLVKSLNGRLANHKACVKGLGLRRINHTVEVQDTPENR GMINKAYYLLRVEG" gene complement(14953..15453) /gene="rpsE" /locus_tag="ACLBUO_RS05705" /old_locus_tag="ACLBUO_05705" CDS complement(14953..15453) /gene="rpsE" /locus_tag="ACLBUO_RS05705" /old_locus_tag="ACLBUO_05705" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_003093697.1" /GO_component="GO:0015935 - small ribosomal subunit [Evidence IEA]" /GO_function="GO:0003735 - structural constituent of ribosome [Evidence IEA]" /GO_process="GO:0006412 - translation [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="30S ribosomal protein S5" /protein_id="WP_003093697.1" /translation="MANNEQKRDEGYIEKLVQVNRVAKTVKGGRIFAFTALTVVGDGK GRVGFGRGKAREVPAAIQKAMEAARRNMIQVDLNGTTLQYPTKSAHGASKVYMQPASE GTGIIAGGAMRAVLEVAGVQNVLAKCYGSTNPVNVVYATFKGLKNMQAPEAVAAKRGK SVEEIL" gene complement(15457..15807) /gene="rplR" /locus_tag="ACLBUO_RS05710" /old_locus_tag="ACLBUO_05710" CDS complement(15457..15807) /gene="rplR" /locus_tag="ACLBUO_RS05710" /old_locus_tag="ACLBUO_05710" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_252937.1" /GO_component="GO:0005840 - ribosome [Evidence IEA]" /GO_function="GO:0003735 - structural constituent of ribosome [Evidence IEA]" /GO_process="GO:0006412 - translation [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="50S ribosomal protein L18" /protein_id="WP_003093698.1" /translation="MSVKKETRLRRARKARLKMRELETVRLCVYRSSQHIYAQVIAAD GGKVLASASTLDKDLREGATGNIDAAKKVGQLVAERAKAAGVTQVAFDRSGFKYHGRV KALADAAREGGLEF" gene complement(15818..16351) /gene="rplF" /locus_tag="ACLBUO_RS05715" /old_locus_tag="ACLBUO_05715" CDS complement(15818..16351) /gene="rplF" /locus_tag="ACLBUO_RS05715" /old_locus_tag="ACLBUO_05715" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_252938.1" /GO_component="GO:0005840 - ribosome [Evidence IEA]" /GO_function="GO:0019843 - rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]" /GO_process="GO:0006412 - translation [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="50S ribosomal protein L6" /protein_id="WP_003093699.1" /translation="MSRVAKNPVKLPAGVEIKLAGQQLSIKGAKGALELKVHPSVEVI QDSGELRFAARNGDQQTRAMAGTTRALVNNMVVGVSQGFERKLQLVGVGYKAQAKGQV LSLSLGFSHPVDYELPAGIVAETPSQTDILIKGIDKQLVGQVAAEIRDFRPPEPYKGK GVRYADEVVRRKEAKKK" gene complement(16363..16755) /gene="rpsH" /locus_tag="ACLBUO_RS05720" /old_locus_tag="ACLBUO_05720" CDS complement(16363..16755) /gene="rpsH" /locus_tag="ACLBUO_RS05720" /old_locus_tag="ACLBUO_05720" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_002555475.1" /GO_component="GO:0005840 - ribosome [Evidence IEA]" /GO_function="GO:0003735 - structural constituent of ribosome [Evidence IEA]" /GO_process="GO:0006412 - translation [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="30S ribosomal protein S8" /protein_id="WP_003093700.1" /translation="MSMQDPLADMLTRIRNAQMAEKTVVSMPSSKLKAAVAKVLKDEG YIADFQISSEVKPQLSIELKYFEGKPVIEEVKRISRPGLRQYKSVEQLPKVRGGLGVS IVSTNKGVMTDRAARAAGVGGEVLCTVF" gene complement(16945..17250) /gene="rpsN" /locus_tag="ACLBUO_RS05725" /old_locus_tag="ACLBUO_05725" CDS complement(16945..17250) /gene="rpsN" /locus_tag="ACLBUO_RS05725" /old_locus_tag="ACLBUO_05725" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_003400428.1" /GO_component="GO:0005840 - ribosome [Evidence IEA]" /GO_function="GO:0003735 - structural constituent of ribosome [Evidence IEA]" /GO_process="GO:0006412 - translation [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="30S ribosomal protein S14" /protein_id="WP_003093701.1" /translation="MAKESMKNRELKRQLTVAKYAKKRAELKAIIANPNSSAEERWNA QVALQKQPRDASASRLRNRCRLTGRPHGFYRKFGLSRNKLREAAMRGDVPGLVKASW" gene complement(17264..17803) /gene="rplE" /locus_tag="ACLBUO_RS05730" /old_locus_tag="ACLBUO_05730" CDS complement(17264..17803) /gene="rplE" /locus_tag="ACLBUO_RS05730" /old_locus_tag="ACLBUO_05730" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_252941.1" /GO_component="GO:0005840 - ribosome [Evidence IEA]" /GO_function="GO:0003735 - structural constituent of ribosome [Evidence IEA]" /GO_process="GO:0006412 - translation [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="50S ribosomal protein L5" /protein_id="WP_003093703.1" /translation="MARLKEIYRKEIAPKLKEELQLANVMEVPRVTKITLNMGLGEAV GDKKIIENAVADLEKITGQKPVVTYARKSIAGFKIREGWPIGVKVTLRSDRMYEFLDR LLSISLPRVRDFRGLNAKSFDGRGNYSMGVKEQIIFPEIDYDKIDALRGLDITLTTTA RTDDEGRALLRAFKFPFRN" gene complement(17823..18137) /gene="rplX" /locus_tag="ACLBUO_RS05735" /old_locus_tag="ACLBUO_05735" CDS complement(17823..18137) /gene="rplX" /locus_tag="ACLBUO_RS05735" /old_locus_tag="ACLBUO_05735" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_252942.1" /GO_component="GO:0005840 - ribosome [Evidence IEA]" /GO_function="GO:0003735 - structural constituent of ribosome [Evidence IEA]" /GO_process="GO:0006412 - translation [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="50S ribosomal protein L24" /protein_id="WP_003093711.1" /translation="MQKIRRDDEVIVIAGKDKGKRGKVLKVLADDRLVVGGVNLIKRH TKPNPMLGQQGGIVEKEAPLHVSNVAIFNTETSKADRVGFKVEDGKKIRVFKSTQKPV QA" gene complement(18150..18518) /gene="rplN" /locus_tag="ACLBUO_RS05740" /old_locus_tag="ACLBUO_05740" CDS complement(18150..18518) /gene="rplN" /locus_tag="ACLBUO_RS05740" /old_locus_tag="ACLBUO_05740" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_012728338.1" /GO_component="GO:0015934 - large ribosomal subunit [Evidence IEA]" /GO_function="GO:0003735 - structural constituent of ribosome [Evidence IEA]" /GO_process="GO:0006412 - translation [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="50S ribosomal protein L14" /protein_id="WP_003093714.1" /translation="MIQTQSMLDVADNSGARRVMCIKVLGGSHRRYAGIGDIIKVTVK EAIPRGKVKKGQVMTAVVVRTKHGVRRTDGSIIRFDGNAAVLLNNKQEPIGTRIFGPV TRELRTEKFMKIVSLAPEVL" gene complement(18542..18808) /gene="rpsQ" /locus_tag="ACLBUO_RS05745" /old_locus_tag="ACLBUO_05745" CDS complement(18542..18808) /gene="rpsQ" /locus_tag="ACLBUO_RS05745" /old_locus_tag="ACLBUO_05745" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_252944.1" /GO_component="GO:0005840 - ribosome [Evidence IEA]" /GO_function="GO:0003735 - structural constituent of ribosome [Evidence IEA]" /GO_process="GO:0006412 - translation [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="30S ribosomal protein S17" /protein_id="WP_003093717.1" /translation="MAEAQKTVRTLTGRVVSDKMDKTVTVLIERRVKHPIYGKYVKRS TKLHAHDESNQCRIGDLVTIRETRPLAKTKAWTLVDIVERAVEV" gene complement(18811..19002) /gene="rpmC" /locus_tag="ACLBUO_RS05750" /old_locus_tag="ACLBUO_05750" CDS complement(18811..19002) /gene="rpmC" /locus_tag="ACLBUO_RS05750" /old_locus_tag="ACLBUO_05750" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_002555481.1" /GO_component="GO:0005840 - ribosome [Evidence IEA]" /GO_function="GO:0003735 - structural constituent of ribosome [Evidence IEA]" /GO_process="GO:0006412 - translation [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="50S ribosomal protein L29" /protein_id="WP_003093720.1" /translation="MKANELREKSVEQLNEQLLGLLRDQFNLRMQKATGQLGQSHLLS QVKRDIARVKTVLNQQAGK" gene complement(19002..19415) /gene="rplP" /locus_tag="ACLBUO_RS05755" /old_locus_tag="ACLBUO_05755" CDS complement(19002..19415) /gene="rplP" /locus_tag="ACLBUO_RS05755" /old_locus_tag="ACLBUO_05755" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_017805229.1" /GO_function="GO:0019843 - rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]" /GO_process="GO:0006412 - translation [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="50S ribosomal protein L16" /protein_id="WP_003093723.1" /translation="MLQPKRTKFRKQMTGHNRGLAHRGSKVSFGEYALKATSRGRLTA RQIESARRALTRHVKRGGKIWIRVFPDKPVTKKPLEVRMGKGKGGVEYWVAQIQPGKV LYEIEGVSEELAREAFALAAAKLPLATSFVKRTVM" gene complement(19427..20113) /gene="rpsC" /locus_tag="ACLBUO_RS05760" /old_locus_tag="ACLBUO_05760" CDS complement(19427..20113) /gene="rpsC" /locus_tag="ACLBUO_RS05760" /old_locus_tag="ACLBUO_05760" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_003176422.1" /GO_function="GO:0003735 - structural constituent of ribosome [Evidence IEA]" /GO_process="GO:0006412 - translation [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="30S ribosomal protein S3" /protein_id="WP_003093727.1" /translation="MGQKVHPNGIRLGIVKEHTSVWYADRKNYADYLFADLKVREYLQ DKLKSASVSRIDIHRPAQTARITIHTARPGIVIGKKGEDVEKLRQDLTKQMGVPVHIN IEEIRKPELDAMLVAQSVAQQLERRVMFRRAMKRAVQNAMRIGAKGIKIQVSGRLGGA EIARTEWYREGRVPLHTLRADIDYATYEAHTTYGVIGVKVWIFKGEVIGGRQEELKPV APAPRKKAAR" gene complement(20126..20458) /gene="rplV" /locus_tag="ACLBUO_RS05765" /old_locus_tag="ACLBUO_05765" CDS complement(20126..20458) /gene="rplV" /locus_tag="ACLBUO_RS05765" /old_locus_tag="ACLBUO_05765" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_003304070.1" /GO_component="GO:0015934 - large ribosomal subunit [Evidence IEA]" /GO_function="GO:0003735 - structural constituent of ribosome [Evidence IEA]" /GO_process="GO:0006412 - translation [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="50S ribosomal protein L22" /protein_id="WP_003103908.1" /translation="MEVAAKLSGARISAQKARLVADQIRGKKVGEALNLLAFSSKKAA EIMKKVLESAVANAEHNEGADVDDLKVSTVFVNEGRSLKRIMPRAKGRADRIVKRSCH ITVKVADK" gene complement(20471..20746) /gene="rpsS" /locus_tag="ACLBUO_RS05770" /old_locus_tag="ACLBUO_05770" CDS complement(20471..20746) /gene="rpsS" /locus_tag="ACLBUO_RS05770" /old_locus_tag="ACLBUO_05770" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_252949.1" /GO_component="GO:0015935 - small ribosomal subunit [Evidence IEA]" /GO_function="GO:0003735 - structural constituent of ribosome [Evidence IEA]" /GO_process="GO:0006412 - translation [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="30S ribosomal protein S19" /protein_id="WP_003093734.1" /translation="MPRSLKKGPFIDLHLLKKVEVAVEKNDRKPIKTWSRRSMILPHM VGLTIAVHNGRQHVPVLVNEDMVGHKLGEFAATRTYRGHAADKKAKR" gene complement(20763..21584) /gene="rplB" /locus_tag="ACLBUO_RS05775" /old_locus_tag="ACLBUO_05775" CDS complement(20763..21584) /gene="rplB" /locus_tag="ACLBUO_RS05775" /old_locus_tag="ACLBUO_05775" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_252950.1" /GO_component="GO:0015934 - large ribosomal subunit [Evidence IEA]" /GO_function="GO:0003723 - RNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]" /GO_process="GO:0006412 - translation [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="50S ribosomal protein L2" /protein_id="WP_003103878.1" /translation="MAIVKCKPTSAGRRFVVKVVNQELHKGAPYAPLLEKKSKSGGRN NNGRITTRHIGGGHKQHYRLVDFRRNKDGIPAIVERVEYDPNRTAHIALLKYADGERR YIIAPKGVAAGDQLISGIGAPIKAGNSMPLRNIPVGSTVHGIELKPGKGAQIARSAGA SAQLVAREGAYVTLRLRSGEMRKVLAECRATLGEVSNSEHSLRSLGKAGATRWRGVRP TVRGVAMNPVDHPHGGGEGRTSAGRHPVSPWGLQTKGKKTRSNKRTDNMIVRRRK" gene complement(21596..21895) /gene="rplW" /locus_tag="ACLBUO_RS05780" /old_locus_tag="ACLBUO_05780" CDS complement(21596..21895) /gene="rplW" /locus_tag="ACLBUO_RS05780" /old_locus_tag="ACLBUO_05780" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_011169628.1" /GO_component="GO:0005840 - ribosome [Evidence IEA]" /GO_function="GO:0003735 - structural constituent of ribosome [Evidence IEA]" /GO_process="GO:0006412 - translation [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="50S ribosomal protein L23" /protein_id="WP_003093736.1" /translation="MNQERVFKVLLGPHISEKATGLADGKSQFVFKVATDATKLEIKK AVESLFSVKVQRVTTLNVKGKTKRTARGLGKRNDWKKAYIALQPGQDLDFATSAE" gene complement(21892..22494) /gene="rplD" /locus_tag="ACLBUO_RS05785" /old_locus_tag="ACLBUO_05785" CDS complement(21892..22494) /gene="rplD" /locus_tag="ACLBUO_RS05785" /old_locus_tag="ACLBUO_05785" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_252952.1" /GO_component="GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]" /GO_function="GO:0003735 - structural constituent of ribosome [Evidence IEA]" /GO_process="GO:0006412 - translation [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="50S ribosomal protein L4" /protein_id="WP_003093737.1" /translation="MQLNVNGAQAIEVSERTFGGEFNETLVHQAVVAYMAGGRQGSKA QKTRSEVSGGGKKPWRQKGTGRARAGTIRSPIWRGGGTTFAAKPRSHEQKLNKKMYRA ALRSILAELVRLDRLVVVADFAVDAPKTKGLVAKLDTLGLKDVLIVTDGVDENLYLAA RNLAHVDVRDVQGSDPVSLIAYDKVLVTVSAVKKFEELLG" gene complement(22508..23143) /gene="rplC" /locus_tag="ACLBUO_RS05790" /old_locus_tag="ACLBUO_05790" CDS complement(22508..23143) /gene="rplC" /locus_tag="ACLBUO_RS05790" /old_locus_tag="ACLBUO_05790" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_003103877.1" /GO_component="GO:0005840 - ribosome [Evidence IEA]" /GO_function="GO:0003735 - structural constituent of ribosome [Evidence IEA]" /GO_process="GO:0006412 - translation [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="50S ribosomal protein L3" /protein_id="WP_003103877.1" /translation="MTIGVVGRKCGMTRIFTEEGVSIPVTVIEVEPNRVTQFKTEETD GYRAVQVTAGERRASRVTKAQAGHFAKANVAAGRGVWEFRLGEEQYAAGDQITVDLFQ AGQMVDVTGESKGKGFAGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKK MSGHLGAERVTVQSLEIVRVDAERNLLLVKGAVPGATGGDVIVRPAAKARG" gene complement(23226..23537) /gene="rpsJ" /locus_tag="ACLBUO_RS05795" /old_locus_tag="ACLBUO_05795" CDS complement(23226..23537) /gene="rpsJ" /locus_tag="ACLBUO_RS05795" /old_locus_tag="ACLBUO_05795" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_014268624.1" /GO_component="GO:0005840 - ribosome [Evidence IEA]" /GO_function="GO:0003723 - RNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]" /GO_process="GO:0006412 - translation [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="30S ribosomal protein S10" /protein_id="WP_003103876.1" /translation="MQNQQIRIRLKAFDHRLIDQSTQEIVETAKRTGAQVRGPIPLPT RKERFTVLISPHVNKDARDQYEIRTHKRVLDIVQPTDKTVDALMKLDLAAGVEVQISL G" CONTIG join(JBKEPB010000039.1:1..23752) //
Whole sequence (abbreviated view) Selected region from: to:
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