Warning: The NCBI web site requires JavaScript to function. more...
An official website of the United States government
The .gov means it's official. Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you're on a federal government site.
The site is secure. The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.
GenBank: RPEK00000000.1
LOCUS RPEK01000000 65 rc DNA linear BCT 17-DEC-2018 DEFINITION Klebsiella aerogenes strain URMC201, whole genome shotgun sequencing project. ACCESSION RPEK00000000 VERSION RPEK00000000.1 DBLINK BioProject: PRJNA504784 BioSample: SAMN10405414 KEYWORDS WGS. SOURCE Klebsiella aerogenes ORGANISM Klebsiella aerogenes Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Klebsiella/Raoultella group; Klebsiella. REFERENCE 1 (bases 1 to 65) AUTHORS Shin,S.H. and Yang,K.-S. TITLE Complete genome sequence of Enterobacter aerogenes KCTC 2190 JOURNAL Unpublished REFERENCE 2 (bases 1 to 65) AUTHORS Malek,A. and Pecora,N. TITLE Direct Submission JOURNAL Submitted (09-NOV-2018) Pathology, University of Rochester, 601 Elmwood Ave, Rochester, NY 14642, USA COMMENT The Klebsiella aerogenes whole genome shotgun (WGS) project has the project accession RPEK00000000. This version of the project (01) has the accession number RPEK01000000, and consists of sequences RPEK01000001-RPEK01000065. Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SPAdes v. v3.11.1 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 92.2756446069x Sequencing Technology :: Illumina Nextera XT sequencing ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 11/16/2018 18:14:19 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 4.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 5,231 CDS (total) :: 5,100 Genes (coding) :: 4,970 CDS (coding) :: 4,970 Genes (RNA) :: 131 rRNAs :: 9, 10, 15 (5S, 16S, 23S) complete rRNAs :: 5 (5S) partial rRNAs :: 4, 10, 15 (5S, 16S, 23S) tRNAs :: 83 ncRNAs :: 14 Pseudo Genes (total) :: 130 Pseudo Genes (ambiguous residues) :: 0 of 130 Pseudo Genes (frameshifted) :: 60 of 130 Pseudo Genes (incomplete) :: 59 of 130 Pseudo Genes (internal stop) :: 39 of 130 Pseudo Genes (multiple problems) :: 26 of 130 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..65 /organism="Klebsiella aerogenes" /mol_type="genomic DNA" /strain="URMC201" /isolation_source="blood" /host="Homo sapiens" /db_xref="taxon:548" /geo_loc_name="USA: Rochester, NY" /lat_lon="43.1566 N 77.6088 W" /collection_date="2015" /collected_by="Adel Malek" WGS RPEK01000001-RPEK01000065 //
Your browsing activity is empty.
Activity recording is turned off.
Turn recording back on