LOCUS WRMM01000000 360 rc DNA linear ENV 12-MAY-2022
DEFINITION MAG: Candidatus Fibrimonadales bacterium isolate Th196P3bin8, whole
genome shotgun sequencing project.
ACCESSION WRMM00000000
VERSION WRMM00000000.1
DBLINK BioProject: PRJNA560329
BioSample: SAMN12582165
KEYWORDS WGS; ENV; Metagenome Assembled Genome; MAG.
SOURCE Candidatus Fibrimonadales bacterium (termite gut metagenome)
ORGANISM Candidatus Fibrimonadales bacterium
Bacteria; Pseudomonadati; Fibrobacterota; Fibrobacteria; Candidatus
Fibrimonadales.
REFERENCE 1 (bases 1 to 360)
AUTHORS Herve,V., Liu,P., Dietrich,C., Sillam-Dusses,D., Stiblik,P.,
Sobotnik,J. and Brune,A.
TITLE Phylogenomic analysis of 589 metagenome-assembled genomes
encompassing all major prokaryotic lineages from the gut of higher
termites
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 360)
AUTHORS Herve,V. and Brune,A.
TITLE Direct Submission
JOURNAL Submitted (21-OCT-2019) RG Insect Gut Microbiology and Symbiosis,
Max Planck Institute for Terrestrial Microbiology,
Karl-von-Frisch-Strasse 10, Marburg, Hessen 35043, Germany
COMMENT The Candidatus Fibrimonadales bacterium whole genome shotgun (WGS)
project has the project accession WRMM00000000. This version of
the project (01) has the accession number WRMM01000000, and
consists of sequences WRMM01000001-WRMM01000360.
The annotation was added by the NCBI Prokaryotic Genome Annotation
Pipeline (PGAP). Information about PGAP can be found here:
https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
##Genome-Assembly-Data-START##
Assembly Date :: SEP-2017
Assembly Method :: IDBA-UD v. 1.1.1
Genome Representation :: Full
Expected Final Version :: Yes
Genome Coverage :: 13.95x
Sequencing Technology :: Illumina HiSeq
##Genome-Assembly-Data-END##
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Date :: 05/09/2022 11:10:33
Annotation Pipeline :: NCBI Prokaryotic Genome
Annotation Pipeline (PGAP)
Annotation Method :: Best-placed reference protein
set; GeneMarkS-2+
Annotation Software revision :: 6.1
Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;
repeat_region
Genes (total) :: 2,381
CDSs (total) :: 2,335
Genes (coding) :: 2,323
CDSs (with protein) :: 2,323
Genes (RNA) :: 46
rRNAs :: 1, 1, 1 (5S, 16S, 23S)
complete rRNAs :: 1 (5S)
partial rRNAs :: 1, 1 (16S, 23S)
tRNAs :: 41
ncRNAs :: 2
Pseudo Genes (total) :: 12
CDSs (without protein) :: 12
Pseudo Genes (ambiguous residues) :: 0 of 12
Pseudo Genes (frameshifted) :: 0 of 12
Pseudo Genes (incomplete) :: 11 of 12
Pseudo Genes (internal stop) :: 1 of 12
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..360
/organism="Candidatus Fibrimonadales bacterium"
/mol_type="genomic DNA"
/isolate="Th196P3bin8"
/isolation_source="P3 gut compartment"
/host="Termes hospes"
/db_xref="taxon:2604144"
/environmental_sample
/geo_loc_name="Republic of the Congo: Pointe-Noire"
/lat_lon="4.42 S 11.4949 E"
/collection_date="2013-08-12"
/metagenome_source="termite gut metagenome"
/note="metagenomic"
WGS WRMM01000001-WRMM01000360
//