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PREDICTED: Mus musculus zinc finger, CW type with PWWP domain 1 (Zcwpw1), transcript variant X4, mRNA

NCBI Reference Sequence: XM_006504585.4

FASTA Graphics 

LOCUS       XM_006504585            2201 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus zinc finger, CW type with PWWP domain 1
            (Zcwpw1), transcript variant X4, mRNA.
ACCESSION   XM_006504585
VERSION     XM_006504585.4
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000071.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_006504585.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2201
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="5"
     gene            1..2201
                     /gene="Zcwpw1"
                     /gene_synonym="Gm1053"
                     /note="zinc finger, CW type with PWWP domain 1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 mRNAs, 5 ESTs, 201 long SRA reads, and 100% coverage
                     of the annotated genomic feature by RNAseq alignments,
                     including 31 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:381678"
                     /db_xref="MGI:MGI:2685899"
     CDS             239..2047
                     /gene="Zcwpw1"
                     /gene_synonym="Gm1053"
                     /codon_start=1
                     /product="zinc finger CW-type PWWP domain protein 1
                     isoform X3"
                     /protein_id="XP_006504648.1"
                     /db_xref="GeneID:381678"
                     /db_xref="MGI:MGI:2685899"
                     /translation="MMAALQTHKEYEKGTKKTFAPPTQKLHSEKPQPSSWKEDAPGTS
                     SPEAETKPSLLKASLKKEQKPTTEHGPNRGQERKLKAQDQPAKKKGKERTLTSAEFEE
                     IFQIVLQKSLQECLETSSCVQHIRPTKLDEEPGIVPPATDKKDADPEKVITPDTPKIA
                     SSLEEEVNSEMGTSKLGQPVTEPSKKKFNRLSLSKQKKKAEDEKMEKIQDGRECSLKE
                     KQKIVIQDQSQIRGPQKEEESGFGHCVIWVQCSSPKCEKWRQLRGNIDPSVLPDDWSC
                     DQNPDPNYNRCDIPEESWAGCESDVAYASYVPGSIIWAKQYGYPWWPGMIEADPDLGE
                     YFLFASHLDSLPSKYHVTFFGETVSRAWIPVRMLKNFQELSLELVERVNLFGFWSRYN
                     GADISEEGEDLTLCESNNPESCLEKEEKDLEEEKEEEEEKKDPTLPRPKPAKMQTKKP
                     KSRGPAGGPDGTPKKKTAKKSLVSESTVPPVPTLGGKEEQGNSDLDHPVPKKKFKAPE
                     NKTSATNLSEEKEIKIVSKCPTPSAQHGACPLGKEGLVPHMPPTQEAASFPPDDDCSS
                     DLDLEQLMEDIGEPEERGEMQQRGSSEEFLAALFEE"
ORIGIN      
        1 atggcgggct actccggctg cgcagacgca gaagcaactt ccaactgcgc acgcgcagca
       61 cctgagcgca cgccgcttgg gggcggaatt tgtccgtgtc ctcgcgcctt ctcctggtgg
      121 cgggaaaagt tgctcgaggt ggaagggatg tgcggaatgg ctgcgacagc gttagctgcg
      181 cttcaccttt aggtcctcgt cgccccagaa ggcacagaaa gtatagtttc tgaactgaat
      241 gatggcagca ttacagactc acaaagaata cgaaaaggga acaaagaaaa cctttgctcc
      301 acctacacaa aaattacata gcgagaaacc tcagcccagc tcatggaagg aggacgcccc
      361 agggaccagt tctccagagg cagagaccaa gccaagcctg ctcaaagcca gcttaaagaa
      421 ggagcagaaa ccaaccacag agcatggtcc aaacaggggc caggagagaa agctaaaggc
      481 tcaggaccag ccagccaaga agaaaggaaa ggaaagaact cttaccagtg cagaatttga
      541 ggagattttc cagattgtac tacagaagtc cctgcaggag tgcttggaga cttcttcctg
      601 tgtccaacac atcagaccta ccaaattgga tgaagaaccg ggcattgttc ctcctgcaac
      661 tgataagaaa gatgctgatc cagagaaggt aataactcct gatactccaa agattgcatc
      721 ttctttagaa gaggaagtga attctgagat ggggacatct aagctaggcc agccagttac
      781 tgaaccctct aagaagaaat ttaatagact ctctttaagc aaacaaaaga agaaagctga
      841 agatgagaaa atggagaaga tccaagatgg ccgtgagtgc agtctgaagg agaaacagaa
      901 gatagtgatt caggatcagt ctcagatcag aggtccccag aaggaagagg agagtggttt
      961 tggccactgt gtcatctggg ttcagtgttc ctctccaaag tgtgagaagt ggcggcagct
     1021 acgtggaaac attgatccct cagttcttcc agacgactgg tcttgtgacc agaatccaga
     1081 tccgaattat aatcgctgtg acattcctga ggagagctgg gcagggtgcg agagtgatgt
     1141 ggcctatgcc tcctatgtcc caggatccat catctgggcc aagcaatatg gctacccatg
     1201 gtggccaggc atgatagaag ctgatcctga cctgggggag tactttctgt ttgcttctca
     1261 tcttgattcc ctgccgtcta agtaccacgt gacatttttt ggagaaacgg tttctcgtgc
     1321 atggatccca gtccgcatgt taaagaactt ccaggagctg tctttggagc tagtggagcg
     1381 ggttaacttg tttggtttct ggagtcgata caatggagct gacatcagtg aggaagggga
     1441 agatttgact ctctgtgagt ccaacaaccc tgagtcttgt ctggagaagg aagagaagga
     1501 cttagaggag gagaaggagg aggaagaaga gaagaaagat ccaactttgc ctagacccaa
     1561 gccagctaaa atgcagacaa aaaagcccaa gtcaagaggc ccagctggag gaccagatgg
     1621 gactccaaag aagaagactg cgaagaaatc tctggtcagt gaatccacag tccctcctgt
     1681 acccacactg ggagggaagg aagagcaggg gaactcagac ctggaccatc cagtccctaa
     1741 gaaaaaattt aaagctcctg agaacaagac ttcagccacc aacttatctg aggagaaaga
     1801 aattaaaatt gtgtccaaat gccctactcc atcagctcag catggggctt gtccattggg
     1861 aaaggaaggg cttgtgcccc acatgccccc gacacaggag gcagcaagtt tccctcctga
     1921 cgatgattgc tccagtgacc tggacttgga gcaactcatg gaagacattg gagagccaga
     1981 agagagaggg gagatgcagc agagaggcag ctcagaggag ttcctggcgg ccctctttga
     2041 ggagtagagt attctggtcc ccctgctgtt gtttgcctgc agggagagcc tctcatttct
     2101 tcccgagcag ctgataaatg ttggggttgt tgacctgctc tgttgttcaa gtcagctgtg
     2161 cagcctgggt taataaagca ggtctctgga attactcctg a
//
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