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NCBI Reference Sequence: XM_006504585.4
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LOCUS XM_006504585 2201 bp mRNA linear ROD 07-FEB-2024 DEFINITION PREDICTED: Mus musculus zinc finger, CW type with PWWP domain 1 (Zcwpw1), transcript variant X4, mRNA. ACCESSION XM_006504585 VERSION XM_006504585.4 DBLINK BioProject: PRJNA169 KEYWORDS RefSeq. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000071.7) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 21, 2020 this sequence version replaced XM_006504585.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Updated annotation Annotation Name :: GCF_000001635.27-RS_2024_02 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.2 Annotation Method :: Best-placed RefSeq; Gnomon; RefSeqFE; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 02/01/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2201 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="taxon:10090" /chromosome="5" gene 1..2201 /gene="Zcwpw1" /gene_synonym="Gm1053" /note="zinc finger, CW type with PWWP domain 1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 5 ESTs, 201 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns" /db_xref="GeneID:381678" /db_xref="MGI:MGI:2685899" CDS 239..2047 /gene="Zcwpw1" /gene_synonym="Gm1053" /codon_start=1 /product="zinc finger CW-type PWWP domain protein 1 isoform X3" /protein_id="XP_006504648.1" /db_xref="GeneID:381678" /db_xref="MGI:MGI:2685899" /translation="MMAALQTHKEYEKGTKKTFAPPTQKLHSEKPQPSSWKEDAPGTS SPEAETKPSLLKASLKKEQKPTTEHGPNRGQERKLKAQDQPAKKKGKERTLTSAEFEE IFQIVLQKSLQECLETSSCVQHIRPTKLDEEPGIVPPATDKKDADPEKVITPDTPKIA SSLEEEVNSEMGTSKLGQPVTEPSKKKFNRLSLSKQKKKAEDEKMEKIQDGRECSLKE KQKIVIQDQSQIRGPQKEEESGFGHCVIWVQCSSPKCEKWRQLRGNIDPSVLPDDWSC DQNPDPNYNRCDIPEESWAGCESDVAYASYVPGSIIWAKQYGYPWWPGMIEADPDLGE YFLFASHLDSLPSKYHVTFFGETVSRAWIPVRMLKNFQELSLELVERVNLFGFWSRYN GADISEEGEDLTLCESNNPESCLEKEEKDLEEEKEEEEEKKDPTLPRPKPAKMQTKKP KSRGPAGGPDGTPKKKTAKKSLVSESTVPPVPTLGGKEEQGNSDLDHPVPKKKFKAPE NKTSATNLSEEKEIKIVSKCPTPSAQHGACPLGKEGLVPHMPPTQEAASFPPDDDCSS DLDLEQLMEDIGEPEERGEMQQRGSSEEFLAALFEE" ORIGIN 1 atggcgggct actccggctg cgcagacgca gaagcaactt ccaactgcgc acgcgcagca 61 cctgagcgca cgccgcttgg gggcggaatt tgtccgtgtc ctcgcgcctt ctcctggtgg 121 cgggaaaagt tgctcgaggt ggaagggatg tgcggaatgg ctgcgacagc gttagctgcg 181 cttcaccttt aggtcctcgt cgccccagaa ggcacagaaa gtatagtttc tgaactgaat 241 gatggcagca ttacagactc acaaagaata cgaaaaggga acaaagaaaa cctttgctcc 301 acctacacaa aaattacata gcgagaaacc tcagcccagc tcatggaagg aggacgcccc 361 agggaccagt tctccagagg cagagaccaa gccaagcctg ctcaaagcca gcttaaagaa 421 ggagcagaaa ccaaccacag agcatggtcc aaacaggggc caggagagaa agctaaaggc 481 tcaggaccag ccagccaaga agaaaggaaa ggaaagaact cttaccagtg cagaatttga 541 ggagattttc cagattgtac tacagaagtc cctgcaggag tgcttggaga cttcttcctg 601 tgtccaacac atcagaccta ccaaattgga tgaagaaccg ggcattgttc ctcctgcaac 661 tgataagaaa gatgctgatc cagagaaggt aataactcct gatactccaa agattgcatc 721 ttctttagaa gaggaagtga attctgagat ggggacatct aagctaggcc agccagttac 781 tgaaccctct aagaagaaat ttaatagact ctctttaagc aaacaaaaga agaaagctga 841 agatgagaaa atggagaaga tccaagatgg ccgtgagtgc agtctgaagg agaaacagaa 901 gatagtgatt caggatcagt ctcagatcag aggtccccag aaggaagagg agagtggttt 961 tggccactgt gtcatctggg ttcagtgttc ctctccaaag tgtgagaagt ggcggcagct 1021 acgtggaaac attgatccct cagttcttcc agacgactgg tcttgtgacc agaatccaga 1081 tccgaattat aatcgctgtg acattcctga ggagagctgg gcagggtgcg agagtgatgt 1141 ggcctatgcc tcctatgtcc caggatccat catctgggcc aagcaatatg gctacccatg 1201 gtggccaggc atgatagaag ctgatcctga cctgggggag tactttctgt ttgcttctca 1261 tcttgattcc ctgccgtcta agtaccacgt gacatttttt ggagaaacgg tttctcgtgc 1321 atggatccca gtccgcatgt taaagaactt ccaggagctg tctttggagc tagtggagcg 1381 ggttaacttg tttggtttct ggagtcgata caatggagct gacatcagtg aggaagggga 1441 agatttgact ctctgtgagt ccaacaaccc tgagtcttgt ctggagaagg aagagaagga 1501 cttagaggag gagaaggagg aggaagaaga gaagaaagat ccaactttgc ctagacccaa 1561 gccagctaaa atgcagacaa aaaagcccaa gtcaagaggc ccagctggag gaccagatgg 1621 gactccaaag aagaagactg cgaagaaatc tctggtcagt gaatccacag tccctcctgt 1681 acccacactg ggagggaagg aagagcaggg gaactcagac ctggaccatc cagtccctaa 1741 gaaaaaattt aaagctcctg agaacaagac ttcagccacc aacttatctg aggagaaaga 1801 aattaaaatt gtgtccaaat gccctactcc atcagctcag catggggctt gtccattggg 1861 aaaggaaggg cttgtgcccc acatgccccc gacacaggag gcagcaagtt tccctcctga 1921 cgatgattgc tccagtgacc tggacttgga gcaactcatg gaagacattg gagagccaga 1981 agagagaggg gagatgcagc agagaggcag ctcagaggag ttcctggcgg ccctctttga 2041 ggagtagagt attctggtcc ccctgctgtt gtttgcctgc agggagagcc tctcatttct 2101 tcccgagcag ctgataaatg ttggggttgt tgacctgctc tgttgttcaa gtcagctgtg 2161 cagcctgggt taataaagca ggtctctgga attactcctg a //
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