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PREDICTED: Homo sapiens carbonic anhydrase 6 (CA6), transcript variant X1, mRNA

NCBI Reference Sequence: XM_011542084.4

FASTA Graphics 

LOCUS       XM_011542084            1079 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens carbonic anhydrase 6 (CA6), transcript
            variant X1, mRNA.
ACCESSION   XM_011542084
VERSION     XM_011542084.4
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000001.11) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 5, 2022 this sequence version replaced XM_011542084.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1079
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="1"
     gene            1..1079
                     /gene="CA6"
                     /gene_synonym="CA-VI; GUSTIN"
                     /note="carbonic anhydrase 6; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 10
                     ESTs, 1 Protein, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 8 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:765"
                     /db_xref="HGNC:HGNC:1380"
                     /db_xref="MIM:114780"
     misc_feature    1
                     /gene="CA6"
                     /gene_synonym="CA-VI; GUSTIN"
                     /experiment="COORDINATES: cap analysis [ECO:0007248]"
                     /note="transcription start site"
     CDS             8..982
                     /gene="CA6"
                     /gene_synonym="CA-VI; GUSTIN"
                     /codon_start=1
                     /product="carbonic anhydrase 6 isoform X1"
                     /protein_id="XP_011540386.1"
                     /db_xref="GeneID:765"
                     /db_xref="HGNC:HGNC:1380"
                     /db_xref="MIM:114780"
                     /translation="MCSTMRALVLLLSLFLLGGQAQHVSDWTYSEGALDEAHWPQHYP
                     ACGGQRQSPINLQRTKVRYNPSLKGLNMTGYETQAGEFPMVNNGHTVQISLPSTMRMT
                     VADGTVYIAQQMHFHWGGASSEISGSEHTVDGIRHVIEIHIVHYNSKYKSYDIAQDAP
                     DGLAVLAAFVEVKNYPENTYYSNFISHLANIKYPGQRTTLTGLDVQDMLPRNLQHYYT
                     YHGSLTTPPCTENVHWFVLADFVKLSRTQVWKLENSLLDHRNKTIHNDYRRTQPLNHR
                     VVESNFPNQENAYIPSGKGHGGHRGRSQNPRVQPTSTRHPLALGSLEA"
ORIGIN      
        1 attacagatg tgcagcacca tgagggccct ggtgcttctg ctgtccctgt tcctgctggg
       61 tggccaggcc cagcatgtgt ctgactggac ctactcagaa ggggcactgg acgaagcgca
      121 ctggccacag cactaccccg cctgtggggg ccagagacag tcgcctatca acctacagag
      181 gacgaaggtg cggtacaacc cctccttgaa ggggctcaat atgacaggct atgagaccca
      241 ggcaggggag ttccccatgg tcaacaatgg ccacacagtg cagatcagcc tgccctccac
      301 catgcgcatg acagtggctg acggcactgt atacatagcc cagcagatgc actttcactg
      361 gggaggtgcg tcctcggaga tcagcggctc tgagcacacc gtggacggga tcagacatgt
      421 gatcgagatt cacattgttc actacaattc taaatacaag agctatgata tagcccaaga
      481 tgcgccggat ggtttggctg tactggcagc cttcgttgag gtgaagaatt accctgaaaa
      541 cacttattac agcaacttca tttctcatct ggccaacatc aagtacccag gacaaagaac
      601 aaccctgact ggccttgacg ttcaggacat gctgcccagg aacctccagc actactacac
      661 ctaccatggc tcactcacca cgcctccctg cactgagaac gtccactggt ttgtgctggc
      721 agattttgtc aagctctcca ggacacaggt ttggaagctg gagaattcct tactggatca
      781 ccgcaacaag accatccaca acgattaccg caggacccag cccctgaacc acagagtggt
      841 ggaatccaac ttcccgaatc aggaaaacgc ctatatcccc tcaggcaagg gccacggggg
      901 gcatcgtggg agaagccaaa atccaagagt acagcccacc tcaacacgcc accccttggc
      961 tctgggcagc ttagaagcct gagttcaaac acagtgaaga tgactaaagg caatgcaccg
     1021 ggcacgtgga gagcattcta aggaatcaaa agacttccca aaaatacgat gcgggtatg
//
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