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NCBI Reference Sequence: XM_036162128.1
FASTA Graphics
LOCUS XM_036162128 6468 bp mRNA linear ROD 07-FEB-2024 DEFINITION PREDICTED: Mus musculus dachshund family transcription factor 2 (Dach2), transcript variant X20, mRNA. ACCESSION XM_036162128 VERSION XM_036162128.1 DBLINK BioProject: PRJNA169 KEYWORDS RefSeq. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000086.8) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Updated annotation Annotation Name :: GCF_000001635.27-RS_2024_02 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.2 Annotation Method :: Best-placed RefSeq; Gnomon; RefSeqFE; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 02/01/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6468 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="taxon:10090" /chromosome="X" gene 1..6468 /gene="Dach2" /gene_synonym="9430028N04Rik" /note="dachshund family transcription factor 2; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 3 ESTs, 70 long SRA reads, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns" /db_xref="GeneID:93837" /db_xref="MGI:MGI:1890446" CDS 485..1666 /gene="Dach2" /gene_synonym="9430028N04Rik" /codon_start=1 /product="dachshund homolog 2 isoform X18" /protein_id="XP_036018021.1" /db_xref="GeneID:93837" /db_xref="MGI:MGI:1890446" /translation="MAEAMKLQKMKLMAMNTLQGNGSQNGTESEPDDLNSTTGGSESS WDKDKIQSPLAASGPQHGIAHAALAGQPGLGGAPTLNPLQQNHLLSNRLDLPFMMMPH PLLPVSLPPASVAMAMNQMNHLNTIANMAAAAQIHSPLSRAGASVIKERIPESPSPAP SLEESHRPGSQTSSHPSSSVSSSPSQMDHHSERMVMMPNNREELIVDQDNGQSIKKFQ RDNKEEVPAQIPVMKSPLDKIQLAPGQALHPGFPGPFIFADSLSSVETLLTNIQGLLK VALDNARIQEKQIQQEKKELRIELFREREIRENLERQLAVELQSRSTMQKRLKKEKKA KRKLQEALEFESKRREQVEQALKQATSGDSGLRMLKDSGIPDIEIENSGTPHDSAAMQ A" ORIGIN 1 acaaccctag tctgtttcag agagtggcgg aagtgttgta aaacaatcca cccatctgtt 61 acagaggctt cccaccgcgc ttcctaaacc tccttgagca gtaacaggat ctcaaccagc 121 aactctgata tgaatgcaag aattctgggg agcggtcctg tggacgctgg ataaggaaga 181 tattacagcc agtgatctaa gtgggagaag acaggctgga agcatggtcc ccctcagaga 241 cctgacaatt ggactctctg ctctgatctc caggcagtga gcaaggctgc acaccgcccc 301 cttctccctt cttgtgttcc acctccattc accgaaagtc ccacacggct tcagttcaag 361 gcctggcagg ccccctaagc gttctttggg agtattgcaa gataatgccc gacttctgcc 421 ccatgcagtc ccaggcctct tatcaccagg actgatcact ccaacaggta tcacagctgc 481 agcgatggct gaggccatga agctccagaa gatgaagctt atggcaatga atactcttca 541 gggtaatgga agccaaaatg ggactgagtc agagccagat gaccttaatt ctacgacagg 601 tggaagtgaa tcctcctggg ataaagataa gatacaatct ccacttgctg cttctggacc 661 tcaacatgga attgctcatg cagcacttgc tggtcagcca ggccttggag gtgctccgac 721 ccttaatcca cttcagcaga atcacctgct aagcaatcgt ctggatctcc catttatgat 781 gatgcctcat cccctacttc cagtcagctt acctcctgca tcagttgcca tggcaatgaa 841 tcagatgaat catctcaata ctattgccaa catggctgct gcagcccaga ttcacagtcc 901 actctccaga gctggtgcct ctgttataaa ggaacggatc ccagagagtc cttctcctgc 961 tccctctctg gaagagagtc atcgtcctgg gagccagacc tcctcccacc caagcagcag 1021 tgtgtccagc tctccctcgc agatggatca tcattcagag agaatggtta tgatgcccaa 1081 caatcgagaa gagcttattg ttgaccaaga taatggacaa agcataaaaa aattccagag 1141 ggataataaa gaagaagtac cagctcaaat cccagtcatg aagtcaccct tggataagat 1201 ccagttggct cctggacagg cattgcatcc tggattccct ggaccattca tttttgcaga 1261 tagtctatct tctgtggaga ctctgttgac caacattcag ggtctactga aagtggcttt 1321 ggataatgct cgtatccagg agaagcagat tcagcaggaa aagaaggaac tgcgaataga 1381 gctcttcaga gaaagagaaa ttagagaaaa cctggagcga caacttgcag ttgagcttca 1441 aagcagaagt acaatgcaaa agcgtctgaa aaaagagaaa aaggctaaga gaaaacttca 1501 ggaagccttg gaatttgaat caaagcgccg cgagcaagtg gagcaagcac ttaaacaagc 1561 tacatctggt gacagtggac tgagaatgtt aaaagattct ggaattccag atattgaaat 1621 agaaaacagt ggaacgccgc atgacagtgc tgctatgcaa gcctgaacac tgatgccgga 1681 actccaagtg atcatagaca cggatagggt gctgtagcag ttacctgctt acttagtgtt 1741 gtgattcttt agaattcatg ctcagattct tttaaaatat ggaacacaca attactattt 1801 gttcataatt gttgactaga accttgaaca cataggaaaa atgtattaga gaatggtctt 1861 tgcaagattt taaggggcaa ttatgatgac cgaacgtgat attttatagt ttctttaccc 1921 atttcttcca acaagctact agtgcttcac aaacattatc acatttatcc acacagcagg 1981 tttgtagtgg gtaagtaggt ggcacaattt tgaagatgga taaaatgata tttctagaat 2041 tgtatgtaag aaaataaaat atagaaaaat ctactttgag ctgtgcctat tatggaataa 2101 ctttctaatt ctccaataca ttatttaaca gtacctttat tagcagacaa tttattggta 2161 caaatattgt agtggcctgt gaactcactt tgtagaagaa agtgtgcctg atttgttctc 2221 ctttaaaaaa aaatcataga gagctttaat acttaaataa tgccacacca acattttcct 2281 tttatttggt aaggtagagc aagttatcta ctctctttct actagcacat accttatcta 2341 taaagaagac aatgataaaa actgatccca gcctactaaa tttgccttct ttactctttt 2401 ttcttcattt tgatcacgaa ctctgcttct tttttataat ggtaccaaca gaaaaaaatt 2461 gtatgaataa aacccacaga tacaagaaaa aataaagaaa gatattatag ttcattttca 2521 atgtgaacat ttatactatt catcctctga tctaaaacta atcaggtaac tcgcatttca 2581 aaaaatatat aaatggcctg aattgttcag gaaatgtttt agaatatttt ttgacagttt 2641 acttattaaa gacctagcca caaacaggcg atattaatta tgcccatttt cacacctcct 2701 aagaatctac tacatcagta tttgagtcat ttaatgacac ttctcaagca tttagattgc 2761 accagcaaaa tcttattcat tgtgtagtat ctaccctagt atcaaattct gttgtgacaa 2821 aagttctact catgtaaaat accaactgat attttattca tttttctaat aattaattcc 2881 ctgtagtcat atatgtaatt tcttttggaa tgaccaataa acttaaataa tttttaaaat 2941 aatacattaa ttcatatcaa tatgatatat tacttgtttc acatcctgaa aattttttcg 3001 aagttataaa gaattttgct tttggtactt tctatgatgc acacatgatt tacttgtaca 3061 caatctataa tgtttcatct gattgcatca aaataatgca aacttagaaa taattgatga 3121 acaatgaaat ataattggca aaatcaaata tatgaatgaa ttaacaatga cttatgacaa 3181 atggtacaac atacatagtc accttttcat tatatagaca aagaacatgt actgaatagt 3241 acataaaatt taataaaatt ttcaagtcag gtcacttaaa cgtacagtag tgtctttttc 3301 actattttaa gtgaaaagta agaatcctgt ttttctggca ttttcccact tgtttggcct 3361 ttttaatggt gcctgatgct aggtgttctt ttattatgag ctttagatgt ataatacaga 3421 aggccagtat cagacttact ggatctgaaa cagtcaattt tggttcttga tgggctcaac 3481 ctatcatcag agggtatcct gatagagaag atcacctgat agagaagagc ttcctatgcc 3541 gtcccaagtt aggcatttct gcattaagga aagcattgca caaacctata tttttactta 3601 aaatactgtc atatctgtaa atacataatt ccccattttg ccctttggat aaatattgaa 3661 gcagtatact tattgccagc tttccacaag tatcaaagta tgtcgctcct tatgagttgc 3721 aaagagccta acattctgct ggagaggagc ttgtcattac ttttccttat ctacaatcat 3781 gtttacatac agaatgcata tgagatcata tctgtttgat gttcaagtat aaaccctctt 3841 aaaactatga aggagtcaac tactaattag ctgtttccta ttcctaatga tgtgagcatg 3901 gcagatttgg attaaaattc agctacagct ctcttctgtt tatggttcca gatgtttttg 3961 ttttatctag gagtttactt tgacagctac tactaaatga taaatcactc atattatagc 4021 agaaatgcat tttgaaattg aaacatggca aactttgcga ttgttccaag gaacagcatc 4081 gattactagg ttattacttg ttccttcctt ataatcagtc tgtattggaa tactcagagc 4141 agtaacagaa gatgtctcaa tattatagaa cgggccatgc tgtttagtta ctactatcct 4201 taaaatttgg ggcagtttta ctaatagcat ctcaacttat tgtattttga gcaaaacaat 4261 tgatttacat cttaatgttg tcttcttggt ggcttagtat gtctcttgat ttgcaagttg 4321 ttgtgcaaac tatttctaat aagctttgta agtgggcaca tttaatgaaa gttgtggcca 4381 aaaatgtttg tctcttgtaa caaagataag aattaaacaa aataaagtga aagatttttt 4441 ttttcaaaaa ctgcattttt ccaaaagaca gtgattgtgt tttccattca ttgctgtgtt 4501 tatatgagtt tttaggtgac attgtttgtt ttactcttgc tttcaaattt gtaatgttca 4561 cattttgtcc tgcatgactc aagctttatt attattgtat aaattcaaat cctagtaaaa 4621 atgaatggca tttgacgttg aagagctttt tactgatttg gggactgtgt gtacagagga 4681 tgaggtagct ggtagaacgg agtacctagt tggtcaatat catcacagaa atttgaacta 4741 tgtagaggct aggacctcat tacagagctc agactgcatg tccaaaagat taatctaagc 4801 agttttctgg ggttaaagat taccaaacta ttaaaaacaa aaaaaaaatt ttatgttctg 4861 gtttctgaaa cattcaagtt agttccatgg ctttcttgta caaatgtcta tttacctgct 4921 aatgaagccc tattccagct tttctgatta acacataata caagtttttc ttctattacc 4981 ttgtatctcc tttatttttg gttttgaaat aattgccacg aaattccatt gattttttta 5041 atatgcaata ttctccaaaa atatattgta gagatttttt ccttataact caaaaccttt 5101 tcccatatgt gttaatattt taaacaagga atatcagtca agcatgataa tacatgcatc 5161 cttatatgta aagagggcac atttgtttta caaaaatgta attttaggtg tttattgaac 5221 ataagtaata gatttgtgct gatttatgaa cacattcttt tctgcttcct gttctgtaac 5281 caaaggataa tttttgttat ttagctagtg aaacaaacag gtcataagcc attataatag 5341 aaaagagcaa ttttaagccc aaagaggcag attataattt ctttttcatt ttcaataata 5401 aaagttaact atatctatga gttggtatct aactagcaaa taatatatag attgtattac 5461 aaatgtttaa atgaatattg gttttgccac ttaaaattca aatgatattg aaaactagtc 5521 tccatatggt gtgcacggtc ttagaattaa cctgggcaat aaaaattcta aatgtacaaa 5581 gttgttatta ttttagagcc aaaccaggca atatctttcc ttctgatttt ggtaaagcac 5641 aggaacttca agtgtaatat tatgtacaaa agtaaaaaaa aaatataaat ctttacagac 5701 attataaaat agtttatgaa gaaagtcttt atcagtttcc aggtcttcaa tgctgtgcaa 5761 aggagaggag ctgttgcatg acatttactt gaaggaactt tgaaatttga ctcattaacc 5821 tacagacatg ttaaattaaa attgaccgat attaaaccat tcctgttaca ttaaaccact 5881 ttaggttcct gaagactgac cttttagtcc tttcatacct atgtttcaac tatggtccac 5941 agaagaacta acatgttttc ttttttttta aggaggtaac tattactgtt tagcaatggc 6001 acagcagttg tgttcagcct gaaaggtcct cgctggcttt acattaaaga agatacttgt 6061 gattccagta tatctctgaa aatatccatc atggagttat ttcagttgtg tttatcagca 6121 aagctctgtg actgaatcat aatttctatg ttacattaag aaaaaaaaaa ggaatacgtg 6181 tatatttaaa aagcaatgat gtgataatct ttgtcctggt attagattca ccaatttaaa 6241 aacatgagct aaaccctgat gacttaagta tattgaccat atttgatgat tttttatgct 6301 catttctgct tggctttttg tccttcaaaa aaaaacatag tagtatctta gagactagaa 6361 acttatatgt atggtttctc tgttctacaa tatgttaagt taaagtacac tttgtttaaa 6421 atgtacttgc taaatttcag tatgaataaa agcattttga atttgtca //
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