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NCBI Reference Sequence: XM_047428852.1
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LOCUS XM_047428852 1728 bp mRNA linear PRI 25-AUG-2024 DEFINITION PREDICTED: Homo sapiens methionyl-tRNA synthetase 1 (MARS1), transcript variant X2, mRNA. ACCESSION XM_047428852 VERSION XM_047428852.1 DBLINK BioProject: PRJNA168 KEYWORDS RefSeq. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000012.12) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Updated annotation Annotation Name :: GCF_000001405.40-RS_2024_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; RefSeqFE; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/23/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1728 /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /chromosome="12" gene 1..1728 /gene="MARS1" /gene_synonym="CMT2U; ILFS2; ILLD; MARS; METRS; MRS; MTRNS; SPG70; TTD9" /note="methionyl-tRNA synthetase 1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 596 ESTs, 272 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 129 samples with support for all annotated introns" /db_xref="GeneID:4141" /db_xref="HGNC:HGNC:6898" /db_xref="MIM:156560" misc_feature 1 /gene="MARS1" /gene_synonym="CMT2U; ILFS2; ILLD; MARS; METRS; MRS; MTRNS; SPG70; TTD9" /experiment="COORDINATES: cap analysis [ECO:0007248]" /note="transcription start site" CDS 24..1664 /gene="MARS1" /gene_synonym="CMT2U; ILFS2; ILLD; MARS; METRS; MRS; MTRNS; SPG70; TTD9" /codon_start=1 /product="methionine--tRNA ligase, cytoplasmic isoform X2" /protein_id="XP_047284808.1" /db_xref="GeneID:4141" /db_xref="HGNC:HGNC:6898" /db_xref="MIM:156560" /translation="MRLFVSDGVPGCLPVLAAAGRARGRAEVLISTVGPEDCVVPFLT RPKVPVLQLDSGNYLFSTSAICRYFFLLSGWEQDDLTNQWLEWEATELQPALSAALYY LVVQGKKGEDVLGSVRRALTHIDHSLSRQNCPFLAGETESLADIVLWGALYPLLQDPA YLPEELSALHSWFQTLSTQEPCQRAAETVLKQQGVLALRPYLQKQPQPSPAEGRAVTN EPEEEELATLSEEEIAMAVTAWEKGLESLPPLRPQQNPVLPVAGERNVLITSALPYVN NVPHLGNIIGCVLSADVFARYSRLRQWNTLYLCGTDEYGTATETKALEEGLTPQEICD KYHIIHADIYRWFNISFDIFGRTTTPQQTKITQDIFQQLLKRGFVLQDTVEQLRCEHC ARFLADRFVEGVCPFCGYEEARGDQCDKCGKLINAVELKKPQCKVCRSCPVVQSSQHL FLDLPKLEKRLEEWLGRTLPGSDWTPNAQFITRSWLRDGLKPRCITRDLKWGTPVPLE GFEDKVFYVWFDATIGYLSITANYTDQWERWWKNPEQP" ORIGIN 1 atcagcgagg gattcacggc gaaatgagac tgttcgtgag tgatggcgtc ccgggttgct 61 tgccggtgct ggccgccgcc gggagagccc ggggcagagc agaggtgctc atcagcactg 121 taggcccgga agattgtgtg gtcccgttcc tgacccggcc taaggtccct gtcttgcagc 181 tggatagcgg caactacctc ttctccacta gtgcaatctg ccgatatttt tttttgttat 241 ctggctggga gcaagatgac ctcactaacc agtggctgga atgggaagcg acagagctgc 301 agccagcttt gtctgctgcc ctgtactatt tagtggtcca aggcaagaag ggggaagatg 361 ttcttggttc agtgcggaga gccctgactc acattgacca cagcttgagt cgtcagaact 421 gtcctttcct ggctggggag acagaatctc tagccgacat tgttttgtgg ggagccctat 481 acccattact gcaagatccc gcctacctcc ctgaggagct gagtgccctg cacagctggt 541 tccagacact gagtacccag gaaccatgtc agcgagctgc agagactgta ctgaaacagc 601 aaggtgtcct ggctctccgg ccttacctcc aaaagcagcc ccagcccagc cccgctgagg 661 gaagggctgt caccaatgag cctgaggagg aggagctggc taccctatct gaggaggaga 721 ttgctatggc tgttactgct tgggagaagg gcctagaaag tttgcccccg ctgcggcccc 781 agcagaatcc agtgttgcct gtggctggag aaaggaatgt gctcatcacc agtgccctcc 841 cttacgtcaa caatgtcccc caccttggga acatcattgg ttgtgtgctc agtgccgatg 901 tctttgccag gtactctcgc ctccgccagt ggaacaccct ctatctgtgt gggacagatg 961 agtatggtac agcaacagag accaaggctc tggaggaggg actaaccccc caggagatct 1021 gcgacaagta ccacatcatc catgctgaca tctaccgctg gtttaacatt tcgtttgata 1081 tttttggtcg caccaccact ccacagcaga ccaaaatcac ccaggacatt ttccagcagt 1141 tgctgaaacg aggttttgtg ctgcaagata ctgtggagca actgcgatgt gagcactgtg 1201 ctcgcttcct ggctgaccgc ttcgtggagg gcgtgtgtcc cttctgtggc tatgaggagg 1261 ctcggggtga ccagtgtgac aagtgtggca agctcatcaa tgctgtcgag cttaagaagc 1321 ctcagtgtaa agtctgccga tcatgccctg tggtgcagtc gagccagcac ctgtttctgg 1381 acctgcctaa gctggagaag cgactggagg agtggttggg gaggacattg cctggcagtg 1441 actggacacc caatgcccag tttatcaccc gttcttggct tcgggatggc ctcaagccac 1501 gctgcataac ccgagacctc aaatggggaa cccctgtacc cttagaaggt tttgaagaca 1561 aggtattcta tgtctggttt gatgccacta ttggctatct gtccatcaca gccaactaca 1621 cagaccagtg ggagagatgg tggaagaacc cagagcaacc ctaggagctg aggataacta 1681 taccttggtc agccacctca ttgctacaga gtacctgaac tatgagga //
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