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PREDICTED: Homo sapiens neutrophil cytosolic factor 4 (NCF4), transcript variant X4, mRNA

NCBI Reference Sequence: XM_054325653.1

FASTA Graphics 

LOCUS       XM_054325653            1715 bp    mRNA    linear   PRI 26-AUG-2024
DEFINITION  PREDICTED: Homo sapiens neutrophil cytosolic factor 4 (NCF4),
            transcript variant X4, mRNA.
ACCESSION   XM_054325653
VERSION     XM_054325653.1
DBLINK      BioProject: PRJNA807723
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_060946) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_009914755.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1715
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /isolate="CHM13"
                     /db_xref="taxon:9606"
                     /chromosome="22"
                     /sex="female"
                     /cell_line="CHM13htert"
                     /tissue_type="hydatidiform mole"
                     /note="haploid cell line"
     gene            1..1715
                     /gene="NCF4"
                     /gene_synonym="CGD3; NCF; P40PHOX; SH3PXD4"
                     /note="neutrophil cytosolic factor 4; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     ESTs, 1 long SRA read, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 1 sample
                     with support for all annotated introns"
                     /db_xref="GeneID:4689"
                     /db_xref="HGNC:HGNC:7662"
                     /db_xref="MIM:601488"
     CDS             503..1693
                     /gene="NCF4"
                     /gene_synonym="CGD3; NCF; P40PHOX; SH3PXD4"
                     /codon_start=1
                     /product="neutrophil cytosol factor 4 isoform X4"
                     /protein_id="XP_054181628.1"
                     /db_xref="GeneID:4689"
                     /db_xref="HGNC:HGNC:7662"
                     /db_xref="MIM:601488"
                     /translation="MLIYYFFLNVGSPMRSKLHEAVSVLIAAVSLEDDGSGRVLSSTE
                     HLLYAGLCSGHWDVGDFEQLPDDVAISANIADIEEKRGFTSHFVFVIEVKTKGGSKYL
                     IYRRYRQFHALQSKLEERFGPDSKSSALACTLPTLPAKVYVGVKQEIAEMRIPALNAY
                     MKSLLSLPVWVLMDEDVRIFFYQSPYDSEQVPQALRRLRPRTRKVKSVSPQGNSVDRM
                     AAPRAEALFDFTGNSKLELNFKAGDVIFLLSRINKDWLEGTVRGATGIFPLSFVKILK
                     DFPEEDDPTNWLRCYYYEDTISTIKSVAWEGGACPAFLPSLRPPPLTSPSHGSLSHSK
                     APSGSQMSHNAVTSHQRPGWPGQPHSPFPHPTPHFQPDASLLQPVTPLGTSRWRKISA
                     ALPY"
ORIGIN      
        1 tgtggccgcc cccgggcctt ctcactgctc ctcataggcc ttagggacaa aggccagtcc
       61 ttctgcagtc cctgatcaac atgagaggct ggggttgagt cagaacccaa atactcagaa
      121 atgcaacctc tcagaactgc tttaacgaaa ctttgagctg tggctcacca ccctcagaca
      181 caaatgagaa cactgaggct ccaagagtgg gagtgacttg cccacggtca cacaacgagt
      241 gaccggcagt gtctggagag gaatgcaggt gtcctgggtc ccaggctggg gccctttgct
      301 tcacatggtg atcagcaatg actttccatc ttctgcgcaa acagaattca cagaatctgg
      361 cttgttcttc cgctaatcag ggcttgcctc aaatgtcacc tcctccaaga agccttcctg
      421 acagccccta cctcattgct gtctgaccct ttgccctatt tcccttttct gcctggttct
      481 tatattacag gaataatatt atatgctcat ttattatttt ttcttgaacg ttggctcccc
      541 catgagaagc aagctccacg aggctgtgtc cgttttgatc gctgctgtat cactagaaga
      601 cgacggtagt ggccgtgtat tgagcagtac tgagcaccta ctgtatgccg ggctctgttc
      661 tgggcactgg gatgtaggtg actttgaaca gcttccggat gatgttgcca tctcggccaa
      721 cattgctgac atcgaggaga agagaggctt caccagccac tttgttttcg tcatcgaggt
      781 gaagacaaaa ggaggatcca agtacctcat ctaccgccgc taccgccagt tccatgcttt
      841 gcagagcaag ctggaggagc gcttcgggcc agacagcaag agcagtgccc tggcctgtac
      901 cctgcccaca ctcccagcca aagtctacgt gggtgtgaaa caggagatcg ccgagatgcg
      961 gatacctgcc ctcaacgcct acatgaagag cctgctcagc ctgccggtct gggtgctgat
     1021 ggatgaggac gtccggatct tcttttacca gtcgccctat gactcagagc aggtgcccca
     1081 ggcactccgc cggctccgcc cgcgcacccg gaaagtcaag agcgtgtccc cacagggcaa
     1141 cagcgttgac cgcatggcag ctccgagagc agaggctcta tttgacttca ctggaaacag
     1201 caaactggag ctgaatttca aagctggaga tgtgatcttc ctcctcagtc ggatcaacaa
     1261 agactggctg gagggcactg tccggggagc cacgggcatc ttccctctct ccttcgtgaa
     1321 gatcctcaaa gacttccctg aggaggacga ccccaccaac tggctgcgtt gctactacta
     1381 cgaagacacc atcagcacca tcaagtctgt ggcctgggag ggaggggcct gtccagcctt
     1441 cctgccatcc ctacgaccac cgcccctcac atcaccttct catgggtccc tctcccactc
     1501 caaagccccc agtggctccc agatgagcca caatgctgta acaagccatc aacgtccagg
     1561 gtggcctggc cagcctcatt cccctttccc ccaccccaca ccccacttcc agcctgatgc
     1621 ctccttactc cagcctgtca cccccttagg gacatcgcgg tggaggaaga tctcagcagc
     1681 actcccctat tgaaagacct gctggagctc acaag
//
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