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PREDICTED: Homo sapiens ubiquitin specific peptidase 51 (USP51), transcript variant X3, mRNA

NCBI Reference Sequence: XM_054326555.1

FASTA Graphics 

LOCUS       XM_054326555            4446 bp    mRNA    linear   PRI 26-AUG-2024
DEFINITION  PREDICTED: Homo sapiens ubiquitin specific peptidase 51 (USP51),
            transcript variant X3, mRNA.
ACCESSION   XM_054326555
VERSION     XM_054326555.1
DBLINK      BioProject: PRJNA807723
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_060947) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_009914755.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4446
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /isolate="CHM13"
                     /db_xref="taxon:9606"
                     /chromosome="X"
                     /sex="female"
                     /cell_line="CHM13htert"
                     /tissue_type="hydatidiform mole"
                     /note="haploid cell line"
     gene            1..4446
                     /gene="USP51"
                     /note="ubiquitin specific peptidase 51; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 mRNAs, 102 long SRA reads, 10 Proteins, and 92%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 48 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:158880"
                     /db_xref="HGNC:HGNC:23086"
     CDS             123..2258
                     /gene="USP51"
                     /codon_start=1
                     /product="ubiquitin carboxyl-terminal hydrolase 51 isoform
                     X1"
                     /protein_id="XP_054182530.1"
                     /db_xref="GeneID:158880"
                     /db_xref="HGNC:HGNC:23086"
                     /translation="MAQVRETSLPSGSGVRWISGGGGGASPEEAVEKAGKMEEAAAGA
                     TKASSRREAEEMKLEPLQEREPAPEENLTWSSSGGDEKVLPSIPLRCHSSSSPVCPRR
                     KPRPRPQPRARSRSQPGLSAPPPPPARPPPPPPPPPPPAPRPRAWRGSRRRSRPGSRP
                     QTRRSCSGDLDGSGDPGGLGDWLLEVEFGQGPTGCSHVESFKVGKNWQKNLRLIYQRF
                     VWSGTPETRKRKAKSCICHVCSTHMNRLHSCLSCVFFGCFTEKHIHKHAETKQHHLAV
                     DLYHGVIYCFMCKDYVYDKDIEQIAKETKEKILRLLTSTSTDVSHQQFMTSGFEDKQS
                     TCETKEQEPKLVKPKKKRRKKSVYTVGLRGLINLGNTCFMNCIVQALTHIPLLKDFFL
                     SDKHKCIMTSPSLCLVCEMSSLFHAMYSGSRTPHIPYKLLHLIWIHAEHLAGYRQQDA
                     HEFLIAILDVLHRHSKDDSGGQEANNPNCCNCIIDQIFTGGLQSDVTCQACHSVSTTI
                     DPCWDISLDLPGSCATFDSQNPERADSTVSRDDHIPGIPSLTDCLQWFTRPEHLGSSA
                     KIKCNSCQSYQESTKQLTMKKLPIVACFHLKRFEHVGKQRRKINTFISFPLELDMTPF
                     LASTKESRMKEGQPPTDCVPNENKYSLFAVINHHGTLESGHYTSFIRQQKDQWFSCDD
                     AIITKATIEDLLYSEGYLLFYHKQGLEKD"
ORIGIN      
        1 agagaaggct ggctgaggag cgcctggaca gcagcagttg ctgacgttct atatcacgcg
       61 cctggggccc aagtcgcagc tgttttccag acgccttgct cctcaggtcg gggagtgatc
      121 tgatggccca ggttcgagaa acttctttgc cctccggctc tggggtccgc tggatctccg
      181 gaggtggggg aggagcctct cctgaggagg cggttgagaa ggcggggaaa atggaggagg
      241 cggcggcggg ggctacgaag gcgtcttcga gacgtgaagc cgaggagatg aagctggagc
      301 cattacaaga gcgtgagccc gcgccggagg agaacttgac gtggagcagc agcggcggcg
      361 acgagaaggt gctcccttca atcccccttc gctgtcacag cagctcctcg cccgtttgcc
      421 cgcgccgcaa gccccgccct cggccccagc cccgggcccg ctcccgcagc cagcctgggc
      481 tctcggcccc acccccgcct ccagcccggc ccccgccccc gccgccaccc ccgcccccac
      541 ccgcaccgcg gcccagggcc tggcgtggat cccggcgcag atcccggcct gggtccaggc
      601 ctcagacacg gagaagctgc tctggtgacc tagacgggtc gggggatcct ggcggcttag
      661 gggactggtt gctggaggtc gagtttggtc agggtcccac aggctgctct catgtggaga
      721 gctttaaagt aggtaagaac tggcagaaga acctgaggtt gatctaccag cgtttcgttt
      781 ggagtgggac cccagagact aggaaacgta aagcaaagtc atgcatctgt cacgtatgta
      841 gtacccatat gaacagactc cactcttgtc tctcctgtgt cttttttggc tgcttcactg
      901 agaaacatat tcacaaacat gcagaaacaa agcagcacca tttagctgta gacctttatc
      961 atggggtcat atattgcttc atgtgtaagg attatgtata tgacaaagac atagaacaga
     1021 ttgccaaaga aacaaaagaa aaaattttga gattattaac ttccacctca acagatgttt
     1081 ctcatcaaca gtttatgaca tcagggtttg aagacaagca atcaacctgt gagacaaagg
     1141 aacaggagcc aaaattggtg aaacccaaga aaaagagaag aaaaaagtca gtctatactg
     1201 taggcctgag agggctaatc aatcttggga acacttgttt tatgaattgt attgtccagg
     1261 cacttaccca tattcctcta ctgaaagatt tcttcctctc tgacaagcac aaatgtataa
     1321 tgacaagccc cagcttgtgt ctggtctgtg aaatgtcttc gctttttcat gctatgtact
     1381 ctgggagccg aactcctcac attccctata agttactgca tctgatatgg atccatgcag
     1441 aacatttagc agggtacagg cagcaggatg cccatgagtt ccttattgca atattagacg
     1501 tgctacatag acacagcaaa gatgatagtg gtgggcagga ggccaataac cccaactgct
     1561 gtaactgcat catagaccaa atctttacag gtggcctgca atcagatgtc acatgtcaag
     1621 cctgccatag tgtttctacc accatagacc catgctggga catcagtttg gacttgcctg
     1681 gctcttgtgc cacattcgat tcccagaacc cagagagggc tgacagcaca gtgagcaggg
     1741 atgaccacat accaggaatc ccctcactta cagactgtct acagtggttt acaaggccag
     1801 agcacctagg aagcagtgcc aaaatcaaat gcaatagttg ccaaagctac caggagtcta
     1861 ctaaacagct cacaatgaaa aaattaccca ttgtggcttg ttttcatctc aagcggtttg
     1921 agcatgtagg caaacagagg cgaaagatta atacctttat ctcctttccc ttggagctgg
     1981 acatgactcc gtttttggcc tctactaaag agagcagaat gaaagaaggc cagccaccaa
     2041 cagattgtgt gcccaatgag aataagtatt ccttgtttgc agtgattaat caccatggaa
     2101 ctttggaaag tggccactat accagcttca tccggcaaca aaaggaccag tggttcagct
     2161 gtgatgatgc catcatcacc aaggctacca ttgaggactt actctacagt gaagggtatt
     2221 tactgttcta tcacaaacag ggtctagaga aagactagtc ttaccagacc acttactgaa
     2281 aaaaaagtaa atgattaggc aaggattttg aagtgacaca cagacctact tggaatggac
     2341 aatgacagta acacctatgt gacagctagt atcttgatat aaagaaccta ttttagcatg
     2401 gcccatgggt ctgtcggaag aaaaaaatga atactaacca gtgaccattc aaccttaaga
     2461 aatggggaga gggagaagag gttgaaaatg gtcacataaa gcataatgaa atgaaaagaa
     2521 tgctttaggt ggggacaacg ggagtagaag tgttctgatg ctactctatg tcatttgttt
     2581 ttacagaaat atcttgtgaa gtcagggagt attcctttat cagcaaaaac ttcacaattg
     2641 gtgttccagc tgtggctgac cagctaaata gtttgaaaga aaaataatat tttaaaataa
     2701 agtttaaaga gctttaaaag aaaaacattt aaaaaggaaa aaatcatttt taagatttta
     2761 aaagaaaaaa acttttaaat gttgaaaaaa atttaagttg ttatttttaa aagaaatatt
     2821 ttaaaagtta aaaataattt tttaatttaa agaagtttca gaattttaaa aattaaaagc
     2881 aaagaaaatt aaattcttaa agtttaaaaa tgtaaaataa attaaggaac aaggttaaaa
     2941 atgaaagttt accaaaaaaa ggaagaaaat actgttaaaa attaaagtta gaaacaaagg
     3001 aacatcttaa aagtttcaaa tgaaggaaaa taatataaat agatatttca aaattaaagc
     3061 ataaaatata cgtatttaaa aagtgttaac aaaattacta ctataatgat taagaaataa
     3121 attttcaaaa atacagaatg gaatgcaatt cagattttag agaaaagttt taaaagaggc
     3181 aagtttagaa taattcaaga caaaaagaca aaatgtgttt aaagacaaaa attgaaaaaa
     3241 tacaggaaga aaatagagac ttgtaaaata aaaagaacct tagataagtt caagagattt
     3301 aaatgaaaac tttaaatatt taaataaaga tttaaaaatt taagctttta aaaagaaaaa
     3361 cagttacata aaaattgacc agtgaaaaaa tgtgaaagat tcaagtagaa aaaattatta
     3421 aaattaaaag tttaagaagt tctatttttt tatttaagca tattaaaata cagacgggta
     3481 tgaaagaaat aaatggagga gacaggaata acgacagcgg tgtgtgagta tatatatata
     3541 tatatttttt tttttttgag ctttatgttg atatatcaat atacgttgga aaaggaaata
     3601 gacattttaa tcattatctt accatccaat tgtgaaatgg ctgcaaggcc taaacactaa
     3661 ctaacccacc ttcccctctt gagattccat gccccatctc atatcctgaa ggaagtcaaa
     3721 ttacttccta ggcagaatca attcatctga gaaaaatgaa aacattaggg actttcccat
     3781 ttagaactgc attattcata caaattctta gcttctgaaa aggggctctt gataatttgg
     3841 tggcttagag aagttagatc acagctgtga agctctggct ttggtatttg agccccatgg
     3901 cctgattgag gaagtggcag ggacccatat ctgaggcctt cccaccttcc tttttccctc
     3961 ttccccctcc aaggagaaac aagaccttta atttccacag tagagcaatg ggtttgtgct
     4021 tgcagtcctt ctgctcattc tttattccct ctttatttcc tttttttgtc actcatgcct
     4081 agttccctga accccttact tacctggcct tacctacatc tctgagcccc agcctgcagg
     4141 gctccttctt tgactattca cctggtggct tttactcctc cttcaagacc caactcacag
     4201 atgacttctc tggagtcttc cctgaatgct ctaggcaggt ataaatgaga aaattgttcc
     4261 tctcttcccc tctttattcc tctcactgtg cctccaaagt actttgtcca tacctcggtg
     4321 atagtactta ttctactgtg attttattgt agctttgtga ttgtctgccc ctctgcactg
     4381 agcatctaag aacagggggc caagccttat tcatttctgt gttaataaat atttgttaaa
     4441 tgtgaa
//
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