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PREDICTED: Homo sapiens envoplakin like (EVPLL), transcript variant X6, mRNA

NCBI Reference Sequence: XM_054332097.1

FASTA Graphics 

LOCUS       XM_054332097            1936 bp    mRNA    linear   PRI 26-AUG-2024
DEFINITION  PREDICTED: Homo sapiens envoplakin like (EVPLL), transcript variant
            X6, mRNA.
ACCESSION   XM_054332097
VERSION     XM_054332097.1
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_017363819.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1936
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="17"
                     /map="17p11.2"
     gene            1..1936
                     /gene="EVPLL"
                     /note="envoplakin like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 6 ESTs, 1 long SRA read,
                     and 100% coverage of the annotated genomic feature by
                     RNAseq alignments, including 4 samples with support for
                     all annotated introns"
                     /db_xref="GeneID:645027"
                     /db_xref="HGNC:HGNC:35236"
     CDS             482..1105
                     /gene="EVPLL"
                     /codon_start=1
                     /product="envoplakin-like protein isoform X6"
                     /protein_id="XP_054188072.1"
                     /db_xref="GeneID:645027"
                     /db_xref="HGNC:HGNC:35236"
                     /translation="MVLPPRRGIQGRLGTRAGAETEAGLRRPVWAGHGGAGGTDRGAQ
                     HRAEGDQRPRRAAAEPGGAGCRHHPEPIPRPTEGGVVARAEPGQPVHALQGCTWQLSA
                     LAEQQRRILQQDWSDLMADPAGVRREYEHFKQHELLSQEQSVNQLEEDGKRMVELRHP
                     AVGPIQAHQEALKMEWQNFLNLCICQETQLQHVEDYSRILCPSSSPH"
ORIGIN      
        1 gccagactta gctgaccagc cagcaaggac gcccgctgcc tcccacctgc cctcctgccc
       61 tccttcacca gccaagccca gcctgagcca gcacctgcct ttatgaccat gttcaaggga
      121 ctgagcaaag gctcccaggg gaaggggtcc cccaaggact ccccagccaa ggggtccccc
      181 aaaggctccc ccagcaagca cagctgccag cgccgaccag gtggagcggg acatcctgga
      241 gacgcagaag aggctgcagc aggaccggct gaacagtgag cagagccagg ccctgcagca
      301 ccagcaggag acgggcagca gcctgaagga ggccgaggtg ctgctcaagg acctcttcct
      361 ggacgtggac aaggcccggc ggctcaagca cccgcaggct gaggagactg agaaggacat
      421 cgagcagctg cacgagcggg tgacccagga gtgtgcggag tactgtgccc tgtacgagaa
      481 gatggtgctg ccgccccgac gtgggatcca aggtcgactg ggcacacgtg ctggagcaga
      541 aacagaagct ggtctgcgca ggccagtatg ggccgggcat ggcggagctg gaggaacaga
      601 tcgcggagct caacatcgtg cagaaggaga tcaacgacca aggagagcag ctgcggagcc
      661 tggtggggcc ggatgccgcc accatccgga gccaataccg agacctactg agggcggcgt
      721 cgtggcgcgg gcagagcctg ggcagcctgt acacgcactg cagggctgca cgtggcagct
      781 gagcgccctg gcggagcagc agcgccgcat cctgcagcag gactggagcg acctcatggc
      841 cgaccctgcg ggcgtgcggc gggaatacga gcacttcaag cagcacgagc tgctgagcca
      901 ggagcagagc gtaaaccagc tggaggagga cggcaagcgc atggtggagc tgcggcaccc
      961 cgcggtgggg cccatccagg cccaccagga ggccctgaag atggagtggc agaacttcct
     1021 gaacctgtgc atctgccagg agacccagct ccagcacgtg gaggactaca gccggattct
     1081 gtgtccatct tcctctcctc attgactctg catgaagggg atttctggtg gagtaagggt
     1141 agcagctctt gccgcacgtg cagagagaga ggaacttcca gtgcccgcta tggagccaca
     1201 gcccacagca tggggaagtc cccatccaga ggcagtgctg cagctagagg tagctccaga
     1261 gtcctccggg ccctgcaccg atacagccaa agaccagcaa agcgacaagc tgccagacct
     1321 catgccacct gctgtagcca ctgggctcag ccctggagct gagagcatcg ctggagatag
     1381 acgtggcaga gaagaggttg cgagcatggc cccagccagc agctcccacg ctgcccctag
     1441 tcctgggcat ggagcgagcc ttggtgtcag agaccagggt gtgcagtctg agctcctcta
     1501 ccttactaaa gagaggcctc ttttatttac cagagccaca gccctgctgc ctcaggacct
     1561 tttcattctg ccggtgctgg ggctgtctat ctgcaagctg gaggtgttga gagcaggaaa
     1621 aggaggctgt gaggaagggt tcgggcagct cctcctgctc tcagaggtgg cctcctcctc
     1681 caggcatgga ggtctgtcca ctactgggct tctgggctat ttgcccctga tttgctccct
     1741 ggtacgggct cttcttaaca ggcaggcaag gggtgcgggg accaggtgag ggcttcaaag
     1801 ggtacagtac caaatcttcc aaactcagca cttgtgccct ggggtctcca aactgtcttc
     1861 tgccctagaa tttattcata ctgttaaatt accagtttat gcaaatgata tgtaaataaa
     1921 gctcaatttt ttgaaa
//
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