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PREDICTED: Homo sapiens NIMA related kinase 10 (NEK10), transcript variant X17, mRNA

NCBI Reference Sequence: XM_054345379.1

FASTA Graphics 

LOCUS       XM_054345379            2363 bp    mRNA    linear   PRI 26-AUG-2024
DEFINITION  PREDICTED: Homo sapiens NIMA related kinase 10 (NEK10), transcript
            variant X17, mRNA.
ACCESSION   XM_054345379
VERSION     XM_054345379.1
DBLINK      BioProject: PRJNA807723
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_060927) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_009914755.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2363
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /isolate="CHM13"
                     /db_xref="taxon:9606"
                     /chromosome="3"
                     /sex="female"
                     /cell_line="CHM13htert"
                     /tissue_type="hydatidiform mole"
                     /note="haploid cell line"
     gene            1..2363
                     /gene="NEK10"
                     /gene_synonym="CILD44"
                     /note="NIMA related kinase 10; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     ESTs, 12 long SRA reads, 1 Protein, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 2 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:152110"
                     /db_xref="HGNC:HGNC:18592"
                     /db_xref="MIM:618726"
     CDS             237..2264
                     /gene="NEK10"
                     /gene_synonym="CILD44"
                     /codon_start=1
                     /product="serine/threonine-protein kinase Nek10 isoform
                     X12"
                     /protein_id="XP_054201354.1"
                     /db_xref="GeneID:152110"
                     /db_xref="HGNC:HGNC:18592"
                     /db_xref="MIM:618726"
                     /translation="MPDQDKKVKTTEKSTDKQQEITIRDYSDLKRLRCLLNVQSSKQQ
                     LPAINFDSAQNSMTKSEPAIRAGGHRARGQWHESTEAVELENFSINYKNERNFSKHPQ
                     RKLFQEIFTALVKNRLISREWVNRAPSIHFLRVLICLRLLMRDPCYQEILHSLGGIEN
                     LAQYMEIVANEYLGYGEEQHTVDKLVNMTYIFQKLAAVKDQREWVTTSGAHKTLVNLL
                     GARDTNVLLGSLLALASLAESQECREKISELNIVENLLMILHEYDLLSKRLTAELLRL
                     LCAEPQVKEQVKLYEGIPVLLSLLHSDHLKLLWSIVWILVQVCEDPETSVEIRIWGGI
                     KQLLHILQGDRNFVSDHSSIGSLSSANAAGRIQQLHLSEDLSPREIQENTFSLQAACC
                     AALTELVLNDTNAHQVVQENGVYTIAKLILPNKQKNAAKSNLLQCYAFRALRFLFSME
                     RNRPLFKRLFPTDLFEIFIDIGHYVRDISAYEELVSKLNLLVEDELKQIAENIESINQ
                     NKAPLKYIGNYAILDHLGSGAFGCVYKVRKHSGQNLLAMKEVNLHNPAFGKDKKDRDS
                     SVRNIVSELTIIKEQLYHPNIVRYYKTFLENDRLYIVMELIEGAPLGEHFSSLKEKHH
                     HFTEERLWKIFIQLCLALRYLHKEKRIVHRDLTPNNIMLGDKDKVTVTPRY"
ORIGIN      
        1 ggccgcggtg tccctgaggt tgaggggacc gggaataggc tggggggagg acgggacggg
       61 ctgagactgg acgggacccc cggtctgcag cagcaggtga cagcagcagg gacaatgata
      121 aggagattgg cctgaaggag ggaccgtccc tcccgcgcga aaagtcagaa atggccaatg
      181 aagcttttgc ttataaaagg aatgcgatgt taattctggg gcattgatgt tttacaatgc
      241 ctgatcaaga taaaaaggtg aagaccacag aaaaatcaac tgataaacag caagaaatca
      301 ccatcaggga ctattcagat cttaaaagac ttcggtgcct tttgaacgtc caatcaagca
      361 aacaacagct tccagccatt aacttcgata gtgcccaaaa tagcatgacg aagtctgagc
      421 ccgccatcag ggcgggtgga cacagagctc ggggtcagtg gcatgaatcc acagaagctg
      481 ttgaacttga aaattttagt ataaactaca agaatgagag aaatttcagc aaacatcctc
      541 agcgtaaact atttcaggag atctttaccg ccttggtgaa aaatagactc ataagcagag
      601 agtgggttaa tcgagcccca tctattcatt ttctgagagt gttaatctgt ctgaggctac
      661 taatgaggga tccatgttat caggaaatac tccatagctt gggtgggatt gaaaacctag
      721 ctcagtatat ggagattgta gccaatgagt acctcggcta tggagaagag cagcacactg
      781 tggacaagct ggtcaacatg acatatattt ttcaaaaact tgctgcagtc aaagatcaaa
      841 gagaatgggt caccacaagt ggagcccaca agacattagt aaatttactt ggtgcccgag
      901 atactaatgt tctattgggt tcccttctgg ctctggctag tttagcagaa agtcaagaat
      961 gtagggagaa gataagtgaa ctcaacattg tagaaaatct gttgatgatt ttacatgaat
     1021 atgacttgct ttctaaaaga ctaacagcgg agttgctgcg cctactttgt gcagagcccc
     1081 aggtgaaaga gcaggtgaag ctctatgagg ggataccggt cctcctcagt ctgctccact
     1141 ctgaccactt gaagctcctc tggagcattg tctggattct ggtacaggtt tgtgaggacc
     1201 ctgagaccag cgtggaaatt cgcatttggg gaggcatcaa acagcttctt catattttac
     1261 aaggagacag aaattttgtt tctgatcact cctccattgg aagcctgtcc agtgcaaatg
     1321 ctgcaggccg aatccagcag cttcatttat cagaagactt gagccctagg gaaatacaag
     1381 aaaatacttt ctcacttcaa gcagcctgct gtgctgccct cactgagctg gtgctcaatg
     1441 acaccaatgc ccaccaggtg gttcaggaaa atggtgtata tacaatagca aaattaattt
     1501 taccaaataa gcaaaagaat gcagcaaaaa gtaatctatt acagtgttat gctttcagag
     1561 ccttgagatt tctcttcagt atggaaagaa acagaccact ctttaaaaga cttttcccca
     1621 cagacttgtt tgagatcttc attgacatag ggcattatgt acgtgatatc agtgcttatg
     1681 aagaattggt atccaagctg aatttattag tggaggatga actgaagcaa attgctgaaa
     1741 atattgaaag cattaatcag aacaaagctc ctttgaaata tataggcaac tatgcaattt
     1801 tggatcatct tggaagtgga gcttttggct gtgtttacaa ggttagaaag catagtggtc
     1861 aaaatctttt agcaatgaaa gaggtcaatt tacataaccc agcatttgga aaggataaga
     1921 aagatcgaga cagcagcgta aggaatattg tttctgaatt aacaataatt aaagagcagc
     1981 tttatcatcc caacattgta cgttattaca aaacatttct ggaaaatgat aggttgtaca
     2041 tagttatgga gctgatagaa ggagccccgc ttggagagca tttcagttct ttgaaggaaa
     2101 aacatcacca ttttactgaa gaaagactat ggaaaatatt tatacagctg tgcttagctc
     2161 ttcgatactt acacaaggag aagaggattg tccatagaga tctgacacca aacaacatta
     2221 tgttggggga taaggacaaa gtaaccgtta ccccgaggta ctgaagagtg agccgtatgg
     2281 ggagaaggct gatgtctggg cagtaggctg catcctttat cagatggcga ctttgagtcc
     2341 ccccttctac agcactaaca tgc
//
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