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PREDICTED: Homo sapiens solute carrier family 49 member 3 (SLC49A3), transcript variant X3, mRNA

NCBI Reference Sequence: XM_054351028.1

FASTA Graphics 

LOCUS       XM_054351028            2476 bp    mRNA    linear   PRI 26-AUG-2024
DEFINITION  PREDICTED: Homo sapiens solute carrier family 49 member 3
            (SLC49A3), transcript variant X3, mRNA.
ACCESSION   XM_054351028
VERSION     XM_054351028.1
DBLINK      BioProject: PRJNA807723
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_060928) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_009914755.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2476
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /isolate="CHM13"
                     /db_xref="taxon:9606"
                     /chromosome="4"
                     /sex="female"
                     /cell_line="CHM13htert"
                     /tissue_type="hydatidiform mole"
                     /note="haploid cell line"
     gene            1..2476
                     /gene="SLC49A3"
                     /gene_synonym="LP2561; MFSD7"
                     /note="solute carrier family 49 member 3; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 8 ESTs, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 7 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:84179"
                     /db_xref="HGNC:HGNC:26177"
                     /db_xref="MIM:620318"
     CDS             782..2347
                     /gene="SLC49A3"
                     /gene_synonym="LP2561; MFSD7"
                     /codon_start=1
                     /product="solute carrier family 49 member A3 isoform X3"
                     /protein_id="XP_054207003.1"
                     /db_xref="GeneID:84179"
                     /db_xref="HGNC:HGNC:26177"
                     /db_xref="MIM:620318"
                     /translation="MVQESVGVVGVGRSLDSQGPPAAVLHCFINIHESSWSTQKSHPD
                     TKSRHGLCLGHHSEPCGSALHLWLTSLLRTWSCPWSRSTGCHWSTSWYPPHLAWRPSG
                     SWTPSGSVRRPSWPSWLPCGSQSTSEPRPTCSPPCRTLWASLWPMCCPLCWSRRLGVY
                     TIPAGVVCLLSTICLWESVPPTPPSAGAASSTSEKFLDGLKLQLMWNKAYVILAVCLG
                     GMIGISASFSALLEQILCASGHSSGFSGLCGALFITFGILGALALGPYVDRTKHFTEA
                     TKIGLCLFSLACVPFALVSQLQGQTLALAATCSLLGLFGFSVGPVAMELAVECSFPVG
                     EGAATGMIFVLGQAEGILIMLAMTALTVRRSEPSLSTCQQGEDPLDWTVSLLLMAGLC
                     TFFSCILAVFFHTPYRRLQAESGEPPSTRNAVGGADSGPGVDRGGAGRAGVLGPSTAT
                     PECTARGASLEDPRGPGSPHPACHRATPRAQGPAATDAPSRPGRLAGRVQASRFIDPA
                     GSHSSFSSPWVIT"
ORIGIN      
        1 gtggctaggg attgcgggca ctgggggcac tgtctgtcct ggaggtggct gggcccaggg
       61 cacagagcag ggctgggtgc cccgggggat ctgccagtca cggagtccca gcccttccca
      121 gccttcagtg gctccagcct gggtccctct tccccagcca gtcacataca ggtggccctg
      181 cgttggccct ctctccttcc acgcctccca gccccaggac agcaggcaca cagcagaggc
      241 gcgcttggag ccgccctccc ctccacctga ctctgagtga ggggcggctc ctgggctggg
      301 ctgggttccg tcctgccccc acccccttca ggtgttgcac gctgcagcct ttcccgccct
      361 gtgtgccctc atcagccatc ccccggagcc tcaggaactg gtcaggcagt atctggccaa
      421 cgtgcaatga acagctagag ttggcagcag gacccacagc tcagggaggc gccaggtcac
      481 ggggatggtc aggaagctcg ggggcagggg caggagtcac tctcaggcct gggtcagggc
      541 tcttccaggt ggaccccggg gcctctcccc tcctcctttg ctggctgggt atggagggcc
      601 agcctctggc cgagacaggc ccgggatctg ctggatgggc ccaggggctg cctgctgccc
      661 acaatgctgg cacgagccgt aactcactgc tgtggcttgg cgtcctggcc caccatgtcc
      721 aggcactggg gaagccataa ctggctttgg gtggagtgtc tgagggtgca gggctggttt
      781 catggtccaa gagtcagtgg gtgtcgtagg tgtggggcgt tccttggaca gtcaagggcc
      841 tcctgctgca gttcttcact gttttattaa tatccacgag tcatcatgga gcacacagaa
      901 atctcaccct gacaccaaga gtcgtcatgg tctctgcctg ggtcaccaca gtgagccctg
      961 tggctcagct ttgcacctgt ggctgacgtc attgctgagg acttggtcct gtccatggag
     1021 cagatcaact ggctgtcact ggtctacctc gtggtatcca ccccatttgg cgtggcggcc
     1081 atctggatcc tggactccgt cgggctccgt gcggcgacca tcctggccaa gctggctgcc
     1141 ttgtggttcc cagagcacca gcgagccacg gccaacatgc tcgccaccat gtcgaaccct
     1201 ctgggcgtcc ttgtggccaa tgtgctgtcc cctgtgctgg tcaagaaggc tcggtgtcta
     1261 taccatccct gctggcgtcg tctgcctgct gtccaccatc tgcctgtggg agagtgtgcc
     1321 ccccaccccg ccctctgccg gggctgccag ctccacctca gagaagttcc tggatgggct
     1381 caagctgcag ctcatgtgga acaaggccta tgtcatcctg gctgtgtgct tggggggaat
     1441 gatcgggatc tctgccagct tctcagccct cctggagcag atcctctgtg caagcggcca
     1501 ctccagtggg ttttccggcc tctgtggcgc tctcttcatc acgtttggga tcctgggggc
     1561 actggctctc ggcccctatg tggaccggac caagcacttc actgaggcca ccaagattgg
     1621 cctgtgcctg ttctctctgg cctgcgtgcc ctttgccctg gtgtcccagc tgcagggaca
     1681 gacccttgcc ctggctgcca cctgctcgct gctcgggctg tttggcttct cggtgggccc
     1741 cgtggccatg gagttggcgg tcgagtgttc cttccccgtg ggggaggggg ctgccacagg
     1801 catgatcttt gtgctggggc aggccgaggg aatactcatc atgctggcaa tgacggcact
     1861 gactgtgcga cgctcggagc cgtccttgtc cacctgccag cagggggagg atccacttga
     1921 ctggacagtg tctctgctgc tgatggccgg cctgtgcacc ttcttcagct gcatcctggc
     1981 ggtcttcttc cacaccccat accggcgcct gcaggccgag tctggggagc ccccctccac
     2041 ccgtaacgcc gtgggcggcg cagactcagg gccgggtgtg gaccgagggg gagcaggaag
     2101 ggctggggtc ctggggccca gcacggcgac tccggagtgc acggcgaggg gggcctcgct
     2161 agaggacccc agagggcccg ggagccccca cccagcctgc caccgagcga ctccccgtgc
     2221 gcaaggccca gcagccaccg acgcgccctc ccgccccggc agactcgcag gcagggtcca
     2281 agcgtccagg tttattgacc cggctgggtc tcactcctcc ttctcctccc cgtgggtgat
     2341 cacgtagctg agcgccttgt agtccaggtt gcccgccaca tcgatggagg cgaactggaa
     2401 catctggtcc acctgcgggc gggggcgaaa gggctccttg cgggctccgg gagcgaatta
     2461 caagcgcgca cctgca
//
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