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PREDICTED: Homo sapiens epithelial cell transforming 2 like (ECT2L), transcript variant X2, mRNA

NCBI Reference Sequence: XM_054355330.1

FASTA Graphics 

LOCUS       XM_054355330            4469 bp    mRNA    linear   PRI 26-AUG-2024
DEFINITION  PREDICTED: Homo sapiens epithelial cell transforming 2 like
            (ECT2L), transcript variant X2, mRNA.
ACCESSION   XM_054355330
VERSION     XM_054355330.1
DBLINK      BioProject: PRJNA807723
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_060930) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_009914755.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4469
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /isolate="CHM13"
                     /db_xref="taxon:9606"
                     /chromosome="6"
                     /sex="female"
                     /cell_line="CHM13htert"
                     /tissue_type="hydatidiform mole"
                     /note="haploid cell line"
     gene            1..4469
                     /gene="ECT2L"
                     /gene_synonym="ARHGEF32; C6orf91; dJ509I19.2; dJ509I19.3;
                     dJ509I19.5; FBXO49; LFDH"
                     /note="epithelial cell transforming 2 like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 24 ESTs, 7 long SRA reads, and 94% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     5 samples with support for all annotated introns"
                     /db_xref="GeneID:345930"
                     /db_xref="HGNC:HGNC:21118"
     CDS             186..3026
                     /gene="ECT2L"
                     /gene_synonym="ARHGEF32; C6orf91; dJ509I19.2; dJ509I19.3;
                     dJ509I19.5; FBXO49; LFDH"
                     /codon_start=1
                     /product="epithelial cell-transforming sequence 2
                     oncogene-like isoform X1"
                     /protein_id="XP_054211305.1"
                     /db_xref="GeneID:345930"
                     /db_xref="HGNC:HGNC:21118"
                     /translation="MESFHTRFSAWTPFSNKSLNRQLFQERVALISHWFDLWTNKQRQ
                     EFLFAIFLRCTKSQLRFVQDWFSERMQVAKVDFSTVLPRFISLYIFSFLSPKDLCAAA
                     QVSWPWKFLTEQDCLWMPKCVKFGWFLPYTPTDNEYGAWKRHYIACVSHLDWLTPREA
                     AATYGTLNEPKTEDEELLERQREKCLRKRIWEKIALRKKELFKVRPPWVSGTCCSSVL
                     KPRCQPRLSQTVRERVGLHEALEKQLVLTSLETLPKRSNISGSHSYPLLSKKNWHGVH
                     KNDDRSSYALRPHFMLISSRIPAYEMVMESVKAGVVSVVYEHSVTLESLLYLIEKALD
                     GQKAQSIGIFSDGDSREINLLQGYKIGVKNLLRPEVRDFWEKLGSYVATEEEGGHVDF
                     FVPLGASEAGIEVLSQLSQLTGTFFTAPTGIATGSYQHILSDWLGSQWGKAPSSIYFC
                     ESKLQTWSSFTDFLEETLKTVRKQLYPFFKELQKSISGRMIGQFMFDTMGMTNILNNQ
                     DTAQALADGLMELSKEDSDKPLEFLSYFLLKKCGKKIKDVEGNVIPTKCDPKTTFSLF
                     MKERNVVEDNSWDTKSRLSKNDLNFEALINLERILQKDSAEKRARVVRELLQSERKYV
                     QILEIVRDVYVAPLKAALSSNRAILSAANIQIIFCDILQILSLNRQFLDNLRDRLQEW
                     GPAHCVGEIVTKFGSQLNTYTNFFNNYPVILKTIEKCREMIPAFRTFLKRHDKTIVTK
                     MLSLPELLLYPSRRFEEYLNLLYAVRLHTPAEHVDRGDLTTAIDQIKKYKGYIDQMKQ
                     NITMKDHLSDIQRIIWGCPTLSEVNRYLIRVQDVAQLHCCDEEISFSLRLYEHIHDLS
                     LFLFNDALLVSSRGTSHTPFERTSKTTYQFIASVALHRLLIENIPDSKYVKNAFILQG
                     PKYKWICATEIEDDKFLWLSVLRNAIKSSMEK"
ORIGIN      
        1 agttggcgca ctcgattttc actgcgcggt tccaagagga gacagccgcc actgtaccgg
       61 gcctcatagc cacttcctag aggtgatctt aattgcacac ctattgaaat aaacctgtag
      121 tttctagaag tggaagaaaa tttgctgaga cgtcagctgg ggattcttcc tggagaactc
      181 cagaaatgga gagcttccac accagattta gtgcctggac accttttagc aacaagtcat
      241 taaatagaca gctctttcag gaaagagtgg ctcttataag tcattggttt gacctctgga
      301 ctaacaagca acgtcaagaa ttcttattcg caattttttt aagatgcact aaatcacaat
      361 taaggtttgt ccaagactgg ttttcagaaa ggatgcaagt ggccaaagtg gacttctcta
      421 cagtgttacc acgcttcatt tctctatata tcttttcctt tttgagtccg aaagatttgt
      481 gtgccgctgc ccaagtcagc tggccctgga agtttttaac tgaacaggat tgcttatgga
      541 tgcccaaatg cgttaagttc ggatggtttc tgccctatac tccaacagat aatgagtatg
      601 gtgcttggaa gcgccattac attgcttgtg tgtcccactt agactggctg acacctaggg
      661 aggctgctgc tacttatggg acgctgaatg aacccaaaac agaagatgag gaactactgg
      721 agagacaaag agaaaagtgc ctgaggaaaa gaatttggga gaaaattgca ctacgtaaga
      781 aggagttatt caaagttcga cccccttggg tgagtggaac ttgctgctct agcgtgctaa
      841 agcccagatg ccaaccacgc ctctcccaga ctgtaaggga gcgagtggga ttacatgaag
      901 ctttggagaa acagcttgtt ttgacatcgt tagaaacctt gcccaagcga agcaatattt
      961 ctggaagcca ttcctaccct ttattatcaa agaaaaattg gcatggagtt cataaaaatg
     1021 atgacagatc ttcatatgct ctccggccac acttcatgtt aatatcatcc cggattcctg
     1081 cgtatgagat ggtgatggag agtgtgaagg ctggtgttgt ttctgtggta tatgaacaca
     1141 gcgtaacctt ggaaagcctt ctgtatctta tagaaaaagc tctggatggg cagaaggcac
     1201 agagcatcgg aatatttagc gatggagaca gcagagaaat caatttactc caaggctata
     1261 aaattggtgt taaaaattta ctgaggcctg aagtgagaga tttctgggag aaattaggaa
     1321 gctatgtggc cactgaagaa gaagggggtc acgtggactt cttcgtgccc cttggagcat
     1381 cagaggcagg aattgaagtt ctttcccagc tgtctcaact aactggcacg ttctttacgg
     1441 cccccactgg gattgcaact ggctcttacc agcacattct tagtgattgg ctgggatccc
     1501 aatggggaaa ggccccctct tccatctact tctgcgaatc gaagctacag acgtggtcca
     1561 gcttcacaga cttcctagaa gaaaccttga aaacagtaag gaagcagctg tatcctttct
     1621 tcaaggaact gcagaagagc atcagtggca ggatgatagg gcagtttatg tttgacacca
     1681 tgggtatgac caacattcta aacaaccaag atactgcgca agctctggca gatggattga
     1741 tggagttgtc aaaagaagat tctgacaaac ctctggaatt tttgtcgtat tttctgctga
     1801 agaaatgtgg caaaaagatc aaagatgttg aaggaaatgt tattccaaca aaatgtgacc
     1861 caaagacaac attcagttta ttcatgaagg aaagaaatgt tgtagaagac aattcttggg
     1921 acacaaagtc caggctcagc aaaaatgatt taaattttga agcactgatt aatctggaga
     1981 gaatactcca gaaggactca gcagaaaagc gagctagagt tgtcagagaa ctcttacaga
     2041 gtgagagaaa atacgtgcag atactggaaa ttgtgagaga tgtttatgtc gcaccactga
     2101 aagcagcatt gtcatcaaac agagcgattc tgagtgctgc caatatccag atcattttct
     2161 gtgacattct acagatttta agtctcaaca ggcagtttct agataacctg agagacagac
     2221 tgcaggaatg gggcccagct cactgtgtgg gagaaatagt cacgaagttt ggaagccagt
     2281 taaacacata taccaatttc ttcaacaatt accctgtcat tctgaaaact attgagaagt
     2341 gcagagaaat gataccagca ttccgaactt tcctgaagag gcatgataag accattgtta
     2401 ccaaaatgct gagcctgcca gagctgctgc tgtacccatc ccgaagattt gaagaatacc
     2461 ttaatcttct ctacgctgtc aggcttcata cccctgcaga gcatgttgac cgtggggact
     2521 tgaccactgc aattgaccaa atcaaaaaat ataaaggtta tatagatcag atgaagcaaa
     2581 acatcactat gaaggatcat ctgtcagata tacagagaat catctgggga tgccctactc
     2641 tatcagaagt aaacagatat ctgattaggg tacaagatgt agcccaactt cattgctgtg
     2701 atgaagaaat aagtttctct ttaaggctct atgaacacat ccatgatctc agccttttcc
     2761 tcttcaatga tgccctgctc gtttctagtc ggggcacatc tcacactcca tttgagagga
     2821 cttcaaaaac aacctaccag ttcattgcat cagtggccct tcatcggtta ctcatagaaa
     2881 atattccaga ttccaagtat gtcaagaatg catttattct tcagggtcca aaatataaat
     2941 ggatttgtgc tacagaaata gaggatgata agttcctatg gctgtcagta cttcgaaatg
     3001 caatcaaaag cagtatggag aagtgagacc gaacttgaaa acttcagggg tgccaattct
     3061 ccccagcaaa gacagacaac atgtattttc tgttccaaaa tatccagtaa gaaacagaat
     3121 aactgtcatg gatgatgaga taaactaaga tgacccatag gatctttcca acttttaaac
     3181 tttatcactt gtgctcactt atgtagaatg tataagtaca ttttgagtcc aaaattttga
     3241 actacttctt ttggtagctg tatttcatgg ataatattat ttagagtaat ttgatgtgat
     3301 gaaacctaag acagagcaag cacattgtgt aaagctttgt tttatgatct aatgaaaaaa
     3361 gcagaatgaa agtgtttctt aagtgatcag tctagaaaga tattttaatt tgttggtgat
     3421 ttaccatttt taacattttc atgaaacaat tattgattta aaatatggat aagagggctg
     3481 ggcatgatga ctcacgcctg taatcccagc actttgggag gctgaggtgg cagattacct
     3541 gaggtcagga gtttgagacc agcctcacca acatggagaa accccgtctc tactaaaaat
     3601 acaaaattag ccaggcatgg tggcacacgc ctgtagtccc tgctacttgc gaggctgagg
     3661 caggagaaga atcacttgta cccgggagtc ggaggttgta gtaagctgag atggctccat
     3721 tgcacttcag cctgggtgac aagagcgaac ctctgtctca aaaaaaaaag aaaaaaaaaa
     3781 ggacaagaaa tacaaatggc aatttactca aaaacttgtc acacttatcc ttagtatgaa
     3841 tgtactcctc tagagagcat taaagatata ccactacaaa gtactaaaaa gttttctata
     3901 atttttaagt gttatttatt ggaaggctaa attctaagaa gctttaaaaa atatttttga
     3961 cattgttaaa ttagaaggct atttttaaaa agcatatttt aaaaaacaaa actaaatgga
     4021 aacagcaaaa cttgcttgta atgaaataca gctgagtaaa aatgtttctt tgaaaacaaa
     4081 gacactcaga aaaacaggtg ttgagtagtt tcctgggcct ttaatgcttt aaatttatta
     4141 tttaacaact aaagccatac tgaaagccac ttggaaactt cagctgatgt atatttttac
     4201 ctagatattg tcaggtaaaa attgtattaa tcttggaagc ttgaggttgt cagtttccct
     4261 tgttcttcaa attcttgttt acagtaacaa agtctatcgg tgcagtttag gactgtgaat
     4321 ctatagtatt taaacatttt ttctttcaga aatgaaaata caaaatcttc tatttcttaa
     4381 aactttaaat cttgttaaaa agatgaacaa aagttaaaat attatgctgt tttattggtg
     4441 taaaaccaca cttctgattc tgccaagat
//
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