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NCBI Reference Sequence: XM_054355330.1
FASTA Graphics
LOCUS XM_054355330 4469 bp mRNA linear PRI 26-AUG-2024 DEFINITION PREDICTED: Homo sapiens epithelial cell transforming 2 like (ECT2L), transcript variant X2, mRNA. ACCESSION XM_054355330 VERSION XM_054355330.1 DBLINK BioProject: PRJNA807723 KEYWORDS RefSeq. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_060930) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Updated annotation Annotation Name :: GCF_009914755.1-RS_2024_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; RefSeqFE; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/23/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4469 /organism="Homo sapiens" /mol_type="mRNA" /isolate="CHM13" /db_xref="taxon:9606" /chromosome="6" /sex="female" /cell_line="CHM13htert" /tissue_type="hydatidiform mole" /note="haploid cell line" gene 1..4469 /gene="ECT2L" /gene_synonym="ARHGEF32; C6orf91; dJ509I19.2; dJ509I19.3; dJ509I19.5; FBXO49; LFDH" /note="epithelial cell transforming 2 like; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 ESTs, 7 long SRA reads, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns" /db_xref="GeneID:345930" /db_xref="HGNC:HGNC:21118" CDS 186..3026 /gene="ECT2L" /gene_synonym="ARHGEF32; C6orf91; dJ509I19.2; dJ509I19.3; dJ509I19.5; FBXO49; LFDH" /codon_start=1 /product="epithelial cell-transforming sequence 2 oncogene-like isoform X1" /protein_id="XP_054211305.1" /db_xref="GeneID:345930" /db_xref="HGNC:HGNC:21118" /translation="MESFHTRFSAWTPFSNKSLNRQLFQERVALISHWFDLWTNKQRQ EFLFAIFLRCTKSQLRFVQDWFSERMQVAKVDFSTVLPRFISLYIFSFLSPKDLCAAA QVSWPWKFLTEQDCLWMPKCVKFGWFLPYTPTDNEYGAWKRHYIACVSHLDWLTPREA AATYGTLNEPKTEDEELLERQREKCLRKRIWEKIALRKKELFKVRPPWVSGTCCSSVL KPRCQPRLSQTVRERVGLHEALEKQLVLTSLETLPKRSNISGSHSYPLLSKKNWHGVH KNDDRSSYALRPHFMLISSRIPAYEMVMESVKAGVVSVVYEHSVTLESLLYLIEKALD GQKAQSIGIFSDGDSREINLLQGYKIGVKNLLRPEVRDFWEKLGSYVATEEEGGHVDF FVPLGASEAGIEVLSQLSQLTGTFFTAPTGIATGSYQHILSDWLGSQWGKAPSSIYFC ESKLQTWSSFTDFLEETLKTVRKQLYPFFKELQKSISGRMIGQFMFDTMGMTNILNNQ DTAQALADGLMELSKEDSDKPLEFLSYFLLKKCGKKIKDVEGNVIPTKCDPKTTFSLF MKERNVVEDNSWDTKSRLSKNDLNFEALINLERILQKDSAEKRARVVRELLQSERKYV QILEIVRDVYVAPLKAALSSNRAILSAANIQIIFCDILQILSLNRQFLDNLRDRLQEW GPAHCVGEIVTKFGSQLNTYTNFFNNYPVILKTIEKCREMIPAFRTFLKRHDKTIVTK MLSLPELLLYPSRRFEEYLNLLYAVRLHTPAEHVDRGDLTTAIDQIKKYKGYIDQMKQ NITMKDHLSDIQRIIWGCPTLSEVNRYLIRVQDVAQLHCCDEEISFSLRLYEHIHDLS LFLFNDALLVSSRGTSHTPFERTSKTTYQFIASVALHRLLIENIPDSKYVKNAFILQG PKYKWICATEIEDDKFLWLSVLRNAIKSSMEK" ORIGIN 1 agttggcgca ctcgattttc actgcgcggt tccaagagga gacagccgcc actgtaccgg 61 gcctcatagc cacttcctag aggtgatctt aattgcacac ctattgaaat aaacctgtag 121 tttctagaag tggaagaaaa tttgctgaga cgtcagctgg ggattcttcc tggagaactc 181 cagaaatgga gagcttccac accagattta gtgcctggac accttttagc aacaagtcat 241 taaatagaca gctctttcag gaaagagtgg ctcttataag tcattggttt gacctctgga 301 ctaacaagca acgtcaagaa ttcttattcg caattttttt aagatgcact aaatcacaat 361 taaggtttgt ccaagactgg ttttcagaaa ggatgcaagt ggccaaagtg gacttctcta 421 cagtgttacc acgcttcatt tctctatata tcttttcctt tttgagtccg aaagatttgt 481 gtgccgctgc ccaagtcagc tggccctgga agtttttaac tgaacaggat tgcttatgga 541 tgcccaaatg cgttaagttc ggatggtttc tgccctatac tccaacagat aatgagtatg 601 gtgcttggaa gcgccattac attgcttgtg tgtcccactt agactggctg acacctaggg 661 aggctgctgc tacttatggg acgctgaatg aacccaaaac agaagatgag gaactactgg 721 agagacaaag agaaaagtgc ctgaggaaaa gaatttggga gaaaattgca ctacgtaaga 781 aggagttatt caaagttcga cccccttggg tgagtggaac ttgctgctct agcgtgctaa 841 agcccagatg ccaaccacgc ctctcccaga ctgtaaggga gcgagtggga ttacatgaag 901 ctttggagaa acagcttgtt ttgacatcgt tagaaacctt gcccaagcga agcaatattt 961 ctggaagcca ttcctaccct ttattatcaa agaaaaattg gcatggagtt cataaaaatg 1021 atgacagatc ttcatatgct ctccggccac acttcatgtt aatatcatcc cggattcctg 1081 cgtatgagat ggtgatggag agtgtgaagg ctggtgttgt ttctgtggta tatgaacaca 1141 gcgtaacctt ggaaagcctt ctgtatctta tagaaaaagc tctggatggg cagaaggcac 1201 agagcatcgg aatatttagc gatggagaca gcagagaaat caatttactc caaggctata 1261 aaattggtgt taaaaattta ctgaggcctg aagtgagaga tttctgggag aaattaggaa 1321 gctatgtggc cactgaagaa gaagggggtc acgtggactt cttcgtgccc cttggagcat 1381 cagaggcagg aattgaagtt ctttcccagc tgtctcaact aactggcacg ttctttacgg 1441 cccccactgg gattgcaact ggctcttacc agcacattct tagtgattgg ctgggatccc 1501 aatggggaaa ggccccctct tccatctact tctgcgaatc gaagctacag acgtggtcca 1561 gcttcacaga cttcctagaa gaaaccttga aaacagtaag gaagcagctg tatcctttct 1621 tcaaggaact gcagaagagc atcagtggca ggatgatagg gcagtttatg tttgacacca 1681 tgggtatgac caacattcta aacaaccaag atactgcgca agctctggca gatggattga 1741 tggagttgtc aaaagaagat tctgacaaac ctctggaatt tttgtcgtat tttctgctga 1801 agaaatgtgg caaaaagatc aaagatgttg aaggaaatgt tattccaaca aaatgtgacc 1861 caaagacaac attcagttta ttcatgaagg aaagaaatgt tgtagaagac aattcttggg 1921 acacaaagtc caggctcagc aaaaatgatt taaattttga agcactgatt aatctggaga 1981 gaatactcca gaaggactca gcagaaaagc gagctagagt tgtcagagaa ctcttacaga 2041 gtgagagaaa atacgtgcag atactggaaa ttgtgagaga tgtttatgtc gcaccactga 2101 aagcagcatt gtcatcaaac agagcgattc tgagtgctgc caatatccag atcattttct 2161 gtgacattct acagatttta agtctcaaca ggcagtttct agataacctg agagacagac 2221 tgcaggaatg gggcccagct cactgtgtgg gagaaatagt cacgaagttt ggaagccagt 2281 taaacacata taccaatttc ttcaacaatt accctgtcat tctgaaaact attgagaagt 2341 gcagagaaat gataccagca ttccgaactt tcctgaagag gcatgataag accattgtta 2401 ccaaaatgct gagcctgcca gagctgctgc tgtacccatc ccgaagattt gaagaatacc 2461 ttaatcttct ctacgctgtc aggcttcata cccctgcaga gcatgttgac cgtggggact 2521 tgaccactgc aattgaccaa atcaaaaaat ataaaggtta tatagatcag atgaagcaaa 2581 acatcactat gaaggatcat ctgtcagata tacagagaat catctgggga tgccctactc 2641 tatcagaagt aaacagatat ctgattaggg tacaagatgt agcccaactt cattgctgtg 2701 atgaagaaat aagtttctct ttaaggctct atgaacacat ccatgatctc agccttttcc 2761 tcttcaatga tgccctgctc gtttctagtc ggggcacatc tcacactcca tttgagagga 2821 cttcaaaaac aacctaccag ttcattgcat cagtggccct tcatcggtta ctcatagaaa 2881 atattccaga ttccaagtat gtcaagaatg catttattct tcagggtcca aaatataaat 2941 ggatttgtgc tacagaaata gaggatgata agttcctatg gctgtcagta cttcgaaatg 3001 caatcaaaag cagtatggag aagtgagacc gaacttgaaa acttcagggg tgccaattct 3061 ccccagcaaa gacagacaac atgtattttc tgttccaaaa tatccagtaa gaaacagaat 3121 aactgtcatg gatgatgaga taaactaaga tgacccatag gatctttcca acttttaaac 3181 tttatcactt gtgctcactt atgtagaatg tataagtaca ttttgagtcc aaaattttga 3241 actacttctt ttggtagctg tatttcatgg ataatattat ttagagtaat ttgatgtgat 3301 gaaacctaag acagagcaag cacattgtgt aaagctttgt tttatgatct aatgaaaaaa 3361 gcagaatgaa agtgtttctt aagtgatcag tctagaaaga tattttaatt tgttggtgat 3421 ttaccatttt taacattttc atgaaacaat tattgattta aaatatggat aagagggctg 3481 ggcatgatga ctcacgcctg taatcccagc actttgggag gctgaggtgg cagattacct 3541 gaggtcagga gtttgagacc agcctcacca acatggagaa accccgtctc tactaaaaat 3601 acaaaattag ccaggcatgg tggcacacgc ctgtagtccc tgctacttgc gaggctgagg 3661 caggagaaga atcacttgta cccgggagtc ggaggttgta gtaagctgag atggctccat 3721 tgcacttcag cctgggtgac aagagcgaac ctctgtctca aaaaaaaaag aaaaaaaaaa 3781 ggacaagaaa tacaaatggc aatttactca aaaacttgtc acacttatcc ttagtatgaa 3841 tgtactcctc tagagagcat taaagatata ccactacaaa gtactaaaaa gttttctata 3901 atttttaagt gttatttatt ggaaggctaa attctaagaa gctttaaaaa atatttttga 3961 cattgttaaa ttagaaggct atttttaaaa agcatatttt aaaaaacaaa actaaatgga 4021 aacagcaaaa cttgcttgta atgaaataca gctgagtaaa aatgtttctt tgaaaacaaa 4081 gacactcaga aaaacaggtg ttgagtagtt tcctgggcct ttaatgcttt aaatttatta 4141 tttaacaact aaagccatac tgaaagccac ttggaaactt cagctgatgt atatttttac 4201 ctagatattg tcaggtaaaa attgtattaa tcttggaagc ttgaggttgt cagtttccct 4261 tgttcttcaa attcttgttt acagtaacaa agtctatcgg tgcagtttag gactgtgaat 4321 ctatagtatt taaacatttt ttctttcaga aatgaaaata caaaatcttc tatttcttaa 4381 aactttaaat cttgttaaaa agatgaacaa aagttaaaat attatgctgt tttattggtg 4441 taaaaccaca cttctgattc tgccaagat //
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