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NCBI Reference Sequence: XM_054368476.1
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LOCUS XM_054368476 1149 bp mRNA linear PRI 26-AUG-2024 DEFINITION PREDICTED: Homo sapiens forkhead box R1 (FOXR1), transcript variant X1, mRNA. ACCESSION XM_054368476 VERSION XM_054368476.1 DBLINK BioProject: PRJNA807723 KEYWORDS RefSeq. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_060935) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Updated annotation Annotation Name :: GCF_009914755.1-RS_2024_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; RefSeqFE; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/23/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1149 /organism="Homo sapiens" /mol_type="mRNA" /isolate="CHM13" /db_xref="taxon:9606" /chromosome="11" /sex="female" /cell_line="CHM13htert" /tissue_type="hydatidiform mole" /note="haploid cell line" gene 1..1149 /gene="FOXR1" /gene_synonym="DLNB13; FOXN5" /note="forkhead box R1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns" /db_xref="GeneID:283150" /db_xref="HGNC:HGNC:29980" /db_xref="MIM:615755" CDS 172..1065 /gene="FOXR1" /gene_synonym="DLNB13; FOXN5" /codon_start=1 /product="forkhead box protein R1 isoform X1" /protein_id="XP_054224451.1" /db_xref="GeneID:283150" /db_xref="HGNC:HGNC:29980" /db_xref="MIM:615755" /translation="MGNELFLAFTTSHLPLAEQKLARYKLRIVKPPKLPLEKKPNPDK DGPDYEPNLWMWVNPNIVYPPGKLEVSGRRKREDLTSTLPSSQPPQKEEDASCSEAAG VESLSQSSSKRSPPRKRFAFSPSTWELTEEEEAEDQEDSSSMALPSPHKRAPLQSRRL RQASSQAGRLWSRPPLNYFHLIALALRNSSPCGLNVQQIYSFTRKHFPFFRTAPEGWK NTVRHNLCFRDSFEKVPVSMQGGASTRPRSCLWKLTEEGHRRFAEEARALASTRLESI QQCMSQPGVKTCCAWAQGEET" ORIGIN 1 gcatttgaga aggcgcctgt gagggtcgct cctcagccgc cgcgctccca ctccgcgtcc 61 ccactccgcg ccgccgcgcc tctgccagcc ccgaaggtgg acgtgaagct ccaacacctc 121 gacttctggg cccgcctcca tggccaggtc ccgggactgc tggactggga catggggaac 181 gagctctttc tggccttcac cacatctcac ctccccttag cggagcagaa acttgccagg 241 tataaactcc gaattgttaa gccaccaaaa ttacccctag agaaaaaacc caaccctgat 301 aaggatggtc cagattatga gcccaacctc tggatgtggg taaatcccaa cattgtgtat 361 ccccctggaa agctggaggt ctcaggacgt aggaagaggg aggacctgac aagcacactc 421 ccctcctctc agccacccca gaaggaggaa gatgccagct gctcagaggc cgcaggggtg 481 gaatcactgt cccagtcctc cagcaagcgg tctccccctc ggaagcggtt tgccttttcc 541 cccagcacct gggagctcac agaagaggag gaggctgagg accaggaaga cagctcctct 601 atggctctcc catcccctca caaaagggcc cccctccaga gtcggaggct tcggcaagcc 661 agcagccagg cggggaggct ctggtcccgg ccccctctca attacttcca cctaattgcc 721 ctggcattaa gaaacagttc cccctgtggc ctcaacgtgc aacagatcta cagtttcact 781 cgaaagcact tccccttttt ccggacggcc ccggaaggct ggaagaatac tgtccgtcac 841 aatctctgtt ttcgagacag ctttgagaaa gtgcctgtca gcatgcaggg cggggccagc 901 acacggcctc gatcttgcct ctggaagttg accgaggagg gacaccgccg ctttgcggag 961 gaggcccgcg ccttggcttc cactcggcta gaaagtatcc aacagtgcat gagccagcca 1021 ggtgtgaaga cttgttgtgc gtgggcccaa ggggaagaga cctgaggatc ctgacccaag 1081 gccaagtgtg gaagcctggg tcacaccgtg ggggtggggg aatgcatctt ctataggaaa 1141 cagggagat //
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