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Mus musculus LIM and senescent cell antigen-like domains 1, mRNA (cDNA clone MGC:11585 IMAGE:3711611), complete cds

GenBank: BC005621.1

FASTA Graphics 

LOCUS       BC005621                1295 bp    mRNA    linear   ROD 15-JUL-2006
DEFINITION  Mus musculus LIM and senescent cell antigen-like domains 1, mRNA
            (cDNA clone MGC:11585 IMAGE:3711611), complete cds.
ACCESSION   BC005621
VERSION     BC005621.1
KEYWORDS    MGC.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1295)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 1295)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-APR-2001) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Jeffrey Green M.D.
            cDNA Library Preparation: Life Technologies, Inc.
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Baylor College of Medicine Human Genome
            Sequencing Center
            Center code: BCM-HGSC
            Web site: http://www.hgsc.bcm.tmc.edu/cdna/
            Contact: amg@bcm.tmc.edu
            Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
            Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
            A.N., Gibbs, R.A.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 17 Row: o Column: 10
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 18860508.
FEATURES             Location/Qualifiers
     source          1..1295
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="FVB/N"
                     /db_xref="taxon:10090"
                     /clone="MGC:11585 IMAGE:3711611"
                     /tissue_type="Mammary tumor. C3(1)-Tag model. Infiltrating
                     ductal carcinoma. 5 month old virgin mouse."
                     /clone_lib="NCI_CGAP_Mam6"
                     /lab_host="DH10B"
                     /note="Vector: pCMV-SPORT6"
     gene            1..1295
                     /gene="Lims1"
                     /gene_synonym="PINCH"
                     /gene_synonym="PINCH1"
                     /db_xref="GeneID:110829"
                     /db_xref="MGI:MGI:1195263"
     CDS             46..1059
                     /gene="Lims1"
                     /gene_synonym="PINCH"
                     /gene_synonym="PINCH1"
                     /codon_start=1
                     /product="LIM and senescent cell antigen-like domains 1"
                     /protein_id="AAH05621.1"
                     /db_xref="GeneID:110829"
                     /db_xref="MGI:MGI:1195263"
                     /translation="MLGVAAGMTNSNMANALASATCERCKGGFAPAEKIVNSNGELYH
                     EQCFVCAQCFQQFPEGLFYEFEGRKYCEHDFQMLFAPCCHQCGEFIIGRVIKAMNNSW
                     HPECFRCDLCQEVLADIGFVKNAGRHLCRPCHNREKARGLGKYICQKCHAIIDEQPLI
                     FKNDPYHPDHFNCANCGKELTADARELKGELYCLPCHDKMGVPICGACRRPIEGRVVN
                     AMGKQWHVEHFVCAKCEKPFLGHRHYERKGLAYCETHYNQLFGDVCFHCNRVIEGDVV
                     SALNKAWCVSCFACSTCNTKLTLKNKFVEFDMKPVCKKCYEKFPLELKKRLKKLSETL
                     GRK"
ORIGIN      
        1 gcggcgggga ctgaggcaca gactgacccg gcgtggaccg cggagatgct gggcgtggcg
       61 gccggaatga ccaacagcaa catggccaat gccttggcca gtgccacgtg tgagcgctgc
      121 aagggaggct ttgcgcctgc tgagaagatc gtgaacagta atggtgagct gtaccacgaa
      181 cagtgcttcg tatgtgctca gtgcttccag cagttcccag aaggactctt ttatgagttt
      241 gaaggaagga agtactgtga gcatgatttc caaatgctct ttgctccctg ctgccaccaa
      301 tgtggtgaat tcatcattgg cagggttatc aaagccatga acaacagctg gcatcctgag
      361 tgcttccgat gtgacctctg ccaggaagtg ctggcagaca tagggtttgt caagaatgct
      421 ggcagacacc tatgtcgccc atgtcataat cgtgaaaaag ccagaggcct tggaaaatac
      481 atctgccaga aatgccatgc catcattgat gaacagcctc tgatcttcaa gaacgaccct
      541 taccatccag accacttcaa ctgtgccaac tgcgggaagg agctaactgc tgatgctcgg
      601 gagctgaaag gggagctata ctgtctgcca tgccatgata agatgggggt ccctatctgt
      661 ggcgcctgca ggaggcccat tgaagggcga gtagtgaatg ccatgggcaa gcaatggcat
      721 gtggagcatt ttgtttgtgc caaatgtgaa aaaccatttc ttgggcatcg ccattatgag
      781 aggaagggct tggcctactg tgaaactcac tataatcagc tgtttggtga tgtttgtttc
      841 cattgcaacc gtgtcataga aggtgatgtg gtctctgctc tcaacaaggc ctggtgtgtg
      901 agctgctttg cctgctccac ctgcaatacc aaactcacac tcaagaataa atttgtggaa
      961 tttgacatga agccagtctg taagaagtgc tacgagaaat ttcctttgga gctgaagaaa
     1021 agacttaaga aactatctga gaccttagga aggaaataac ttttggtgtc ttttttctct
     1081 ctcttctaat caatgttact taacctgatc tacccttgct taaaactatg tcagagcatt
     1141 agaatggttt tcttcatttc ccttttctca tttaaaaacg aaagaaaatg tttatttcta
     1201 tgtaaaacac agatgaaatc aggactttca tttctttagc catattagtc tgtaggcatt
     1261 aaaagtatat aaccaaaaac aaaaaaaaaa aaaaa
//
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