PMC Links for GEO DataSets (Select 200016256) - PMC

Select item 56435821.

The long noncoding RNA Wisper controls cardiac fibrosis and remodeling

Rudi Micheletti, Isabelle Plaisance, Brian J. Abraham, Alexandre Sarre, Ching-Chia Ting, Michael Alexanian, Daniel Maric, Damien Maison, Mohamed Nemir, Richard A. Young, Blanche Schroen, Arantxa González, Samir Ounzain, Thierry Pedrazzini

Sci Transl Med. Author manuscript; available in PMC 2017 Oct 17.

Published in final edited form as: Sci Transl Med. 2017 Jun 21; 9(395): eaai9118. doi: 10.1126/scitranslmed.aai9118

PMCID:: PMC5643582

Abstract Article PDF–3.0M

Select item 44990212.

Human Body Epigenome Maps Reveal Noncanonical DNA Methylation Variation

Matthew D. Schultz, Yupeng He, John W. Whitaker, Manoj Hariharan, Eran A. Mukamel, Danny Leung, Nisha Rajagopal, Joseph R. Nery, Mark A. Urich, Huaming Chen, Shin Lin, Yiing Lin, Inkyung Jung, Anthony D. Schmitt, Siddarth Selvaraj, Bing Ren, Terrence J. Sejnowski, Wei Wang, Joseph R. Ecker

Nature. Author manuscript; available in PMC 2016 Jan 9.

Published in final edited form as: Nature. 2015 Jul 9; 523(7559): 212–216. Published online 2015 Jun 1. doi: 10.1038/nature14465

Correction in:: Nature. 2016 Feb 11; 530(7589): 242.

PMCID:: PMC4499021

Abstract Article PDF–2.9M

Select item 36072813.

The NIH Roadmap Epigenomics Mapping Consortium

Bradley E Bernstein, John A Stamatoyannopoulos, Joseph F Costello, Bing Ren, Aleksandar Milosavljevic, Alexander Meissner, Manolis Kellis, Marco A Marra, Arthur L Beaudet, Joseph R Ecker, Peggy J Farnham, Martin Hirst, Eric S Lander, Tarjei S Mikkelsen, James A Thomson

Nat Biotechnol. Author manuscript; available in PMC 2013 Mar 25.

Published in final edited form as: Nat Biotechnol. 2010 Oct; 28(10): 1045–1048. doi: 10.1038/nbt1010-1045

PMCID:: PMC3607281

Article PDF–797K

Select item 35975464.

RFECS: A Random-Forest Based Algorithm for Enhancer Identification from Chromatin State

Nisha Rajagopal, Wei Xie, Yan Li, Uli Wagner, Wei Wang, John Stamatoyannopoulos, Jason Ernst, Manolis Kellis, Bing Ren

PLoS Comput Biol. 2013 Mar; 9(3): e1002968. Published online 2013 Mar 14. doi: 10.1371/journal.pcbi.1002968

PMCID:: PMC3597546

Abstract Article PDF–4.0M

Select item 31003605.

Hotspots of aberrant epigenomic reprogramming in human induced pluripotent stem cells

Ryan Lister, Mattia Pelizzola, Yasuyuki S. Kida, R. David Hawkins, Joseph R. Nery, Gary Hon, Jessica Antosiewicz-Bourget, Ronan O'Malley, Rosa Castanon, Sarit Klugman, Michael Downes, Ruth Yu, Ron Stewart, Bing Ren, James A. Thomson, Ronald M. Evans, Joseph R. Ecker

Nature. Author manuscript; available in PMC 2011 Sep 3.

Published in final edited form as: Nature. 2011 Mar 3; 471(7336): 68–73. Published online 2011 Feb 2. doi: 10.1038/nature09798

Correction in:: volume 514 on page 126

PMCID:: PMC3100360

Abstract Article PDF–1.4M

Select item 28678446.

Distinct Epigenomic Landscapes of Pluripotent and Lineage-committed Human Cells

R. David Hawkins, Gary C. Hon, Leonard K. Lee, QueMinh Ngo, Ryan Lister, Mattia Pelizzola, Lee E. Edsall, Samantha Kuan, Ying Luu, Sarit Klugman, Jessica Antosiewicz-Bourget, Zhen Ye, Celso Espinoza, Saurabh Agarwahl, Li Shen, Victor Ruotti, Wei Wang, Ron Stewart, James A. Thomson, Joseph R. Ecker, Bing Ren

Cell Stem Cell. Author manuscript; available in PMC 2011 May 7.

Published in final edited form as: Cell Stem Cell. 2010 May 7; 6(5): 479–491. doi: 10.1016/j.stem.2010.03.018

PMCID:: PMC2867844

Abstract Article PDF–4.3M

Select item 28575237.

Human DNA methylomes at base resolution show widespread epigenomic differences

Ryan Lister, Mattia Pelizzola, Robert H. Dowen, R. David Hawkins, Gary Hon, Julian Tonti-Filippini, Joseph R. Nery, Leonard Lee, Zhen Ye, Que-Minh Ngo, Lee Edsall, Jessica Antosiewicz-Bourget, Ron Stewart, Victor Ruotti, A. Harvey Millar, James A. Thomson, Bing Ren, Joseph R. Ecker

Nature. Author manuscript; available in PMC 2010 May 19.

Published in final edited form as: Nature. 2009 Nov 19; 462(7271): 315–322. Published online 2009 Oct 14. doi: 10.1038/nature08514

PMCID:: PMC2857523

Abstract Article PDF–3.9M

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