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Items: 15

Select item 68213261.

Monomeric YoeB toxin retains RNase activity but adopts an obligate dimeric form for thermal stability

Ian J Pavelich, Tatsuya Maehigashi, Eric D Hoffer, Ajchareeya Ruangprasert, Stacey J Miles, Christine M Dunham

Nucleic Acids Res. 2019 Nov 4; 47(19): 10400–10413. Published online 2019 Sep 10. doi: 10.1093/nar/gkz760

PMCID:: PMC6821326

Abstract Article PDF–4.5M

Select item 45544612.

YoeB toxin is activated during thermal stress

Brian D Janssen, Fernando Garza-Sánchez, Christopher S Hayes

Microbiologyopen. 2015 Aug; 4(4): 682–697. Published online 2015 Jul 6. doi: 10.1002/mbo3.272

PMCID:: PMC4554461

Abstract Article PDF–1.4M

Select item 38143843.

YoeB–ribosome structure: a canonical RNase that requires the ribosome for its specific activity

Shu Feng, Yun Chen, Katsuhiko Kamada, Han Wang, Kai Tang, Meitian Wang, Yong-Gui Gao

Nucleic Acids Res. 2013 Nov; 41(20): 9549–9556. Published online 2013 Aug 14. doi: 10.1093/nar/gkt742

PMCID:: PMC3814384

Abstract Article PDF–9.2M

Select item 17973504.

The yefM-yoeB Toxin-Antitoxin Systems of Escherichia coli and Streptococcus pneumoniae: Functional and Structural Correlation

Concha Nieto, Izhack Cherny, Seok Kooi Khoo, Mario García de Lacoba, Wai Ting Chan, Chew Chieng Yeo, Ehud Gazit, Manuel Espinosa

J Bacteriol. 2007 Feb; 189(4): 1266–1278. Published online 2006 Oct 27. doi: 10.1128/JB.01130-06

PMCID:: PMC1797350

Abstract Article PDF–483K

Select item 26320735.

Influence of Operator Site Geometry on Transcriptional Control by the YefM-YoeB Toxin-Antitoxin Complex

Simon E. S. Bailey, Finbarr Hayes

J Bacteriol. 2009 Feb; 191(3): 762–772. Published online 2008 Nov 21. doi: 10.1128/JB.01331-08

PMCID:: PMC2632073

Abstract Article PDF–1000K

Select item 25826106.

Translation affects YoeB and MazF messenger RNA interferase activities by different mechanisms

Mikkel Christensen-Dalsgaard, Kenn Gerdes

Nucleic Acids Res. 2008 Nov; 36(20): 6472–6481. Published online 2008 Oct 14. doi: 10.1093/nar/gkn667

PMCID:: PMC2582610

Abstract Article PDF–10M

Select item 19518997.

What Is the Benefit to Escherichia coli of Having Multiple Toxin-Antitoxin Systems in Its Genome?

Virginie Tsilibaris, Geneviève Maenhaut-Michel, Natacha Mine, Laurence Van Melderen

J Bacteriol. 2007 Sep; 189(17): 6101–6108. Published online 2007 May 18. doi: 10.1128/JB.00527-07

PMCID:: PMC1951899

Abstract Article PDF–342K

Select item 27279478.

A Differential Effect of E. coli Toxin-Antitoxin Systems on Cell Death in Liquid Media and Biofilm Formation

Ilana Kolodkin-Gal, Reut Verdiger, Ayalla Shlosberg-Fedida, Hanna Engelberg-Kulka

PLoS One. 2009; 4(8): e6785. Published online 2009 Aug 26. doi: 10.1371/journal.pone.0006785

Correction in:: PLoS One. 2015; 10(10): e0140184.

PMCID:: PMC2727947

Abstract Article PDF–575K

Select item 26320039.

Toxin-Antitoxin Systems in Escherichia coli Influence Biofilm Formation through YjgK (TabA) and Fimbriae

Younghoon Kim, Xiaoxue Wang, Qun Ma, Xue-Song Zhang, Thomas K. Wood

J Bacteriol. 2009 Feb; 191(4): 1258–1267. Published online 2008 Dec 5. doi: 10.1128/JB.01465-08

PMCID:: PMC2632003

Abstract Article PDF–809K

Select item 180256110.

Toxin–antitoxin regulation: bimodal interaction of YefM–YoeB with paired DNA palindromes exerts transcriptional autorepression

Barbara Kędzierska, Lu-Yun Lian, Finbarr Hayes

Nucleic Acids Res. 2007 Jan; 35(1): 325–339. Published online 2006 Dec 14. doi: 10.1093/nar/gkl1028

PMCID:: PMC1802561

Abstract Article PDF–2.2M

Select item 265228311.

The Inhibitory Mechanism of Protein Synthesis by YoeB, an Escherichia coli Toxin

Yonglong Zhang, Masayori Inouye

J Biol Chem. 2009 Mar 13; 284(11): 6627–6638. doi: 10.1074/jbc.M808779200

PMCID:: PMC2652283

Abstract Article PDF–1.4M

Select item 155740212.

Persisters: a distinct physiological state of E. coli

Devang Shah, Zhigang Zhang, Arkady Khodursky, Niilo Kaldalu, Kristi Kurg, Kim Lewis

BMC Microbiol. 2006; 6: 53. Published online 2006 Jun 12. doi: 10.1186/1471-2180-6-53

PMCID:: PMC1557402

Abstract Article PDF–612K

Select item 412385513.

The binary protein-protein interaction landscape of Escherichia coli

Seesandra V. Rajagopala, Patricia Sikorski, Ashwani Kumar, Roberto Mosca, James Vlasblom, Roland Arnold, Jonathan Franca-Koh, Suman B. Pakala, Sadhna Phanse, Arnaud Ceol, Roman Häuser, Gabriella Siszler, Stefan Wuchty, Andrew Emili, Mohan Babu, Patrick Aloy, Rembert Pieper, Peter Uetz

Nat Biotechnol. Author manuscript; available in PMC 2014 Sep 1.

Published in final edited form as: Nat Biotechnol. 2014 Mar; 32(3): 285–290. Published online 2014 Feb 23. doi: 10.1038/nbt.2831

PMCID:: PMC4123855

Abstract Article PDF–1.1M

Select item 168148114.

Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110

Koji Hayashi, Naoki Morooka, Yoshihiro Yamamoto, Katsutoshi Fujita, Katsumi Isono, Sunju Choi, Eiichi Ohtsubo, Tomoya Baba, Barry L Wanner, Hirotada Mori, Takashi Horiuchi

Mol Syst Biol. 2006; 2: 2006.0007. Published online 2006 Feb 21. doi: 10.1038/msb4100049

PMCID:: PMC1681481

Abstract Article PDF–141K

Select item 132520015.

Escherichia coli K-12: a cooperatively developed annotation snapshot—2005

Monica Riley, Takashi Abe, Martha B. Arnaud, Mary K.B. Berlyn, Frederick R. Blattner, Roy R. Chaudhuri, Jeremy D. Glasner, Takashi Horiuchi, Ingrid M. Keseler, Takehide Kosuge, Hirotada Mori, Nicole T. Perna, Guy Plunkett, III, Kenneth E. Rudd, Margrethe H. Serres, Gavin H. Thomas, Nicholas R. Thomson, David Wishart, Barry L. Wanner

Nucleic Acids Res. 2006; 34(1): 1–9. Published online 2006 Jan 5. doi: 10.1093/nar/gkj405