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Items: 14

1.
Determining Genetic Expression Profiles in C. elegans Using Microarray and Real-time PCR
Kassandra L. Guthmueller, Maggie L. Yoder, Andrea M. Holgado
J Vis Exp. 2011; (53): 2777. Published online 2011 Jul 30. doi: 10.3791/2777
PMCID:
PMC3197436
AbstractArticlePDF–539K
2.
Proteasome dysfunction triggers activation of SKN-1A/Nrf1 by the aspartic protease DDI-1
Nicolas J Lehrbach, Gary Ruvkun
eLife. 2016; 5: e17721. Published online 2016 Aug 16. doi: 10.7554/eLife.17721
PMCID:
PMC4987142
AbstractArticlePDF–3.5M
3.
Calnexin revealed as an ether-a-go-go chaperone by getting mutant worms up and going
Jonathan T. Pierce
J Gen Physiol. 2018 Aug 6; 150(8): 1059–1061. doi: 10.1085/jgp.201812068
PMCID:
PMC6080892
AbstractArticlePDF–918K
4.
Protein sequence editing of SKN-1A/Nrf1 by peptide:N-glycanase controls proteasome gene expression.
Nicolas J. Lehrbach, Peter C. Breen, Gary Ruvkun
Cell. Author manuscript; available in PMC 2020 Apr 18.
Published in final edited form as: Cell. 2019 Apr 18; 177(3): 737–750.e15. doi: 10.1016/j.cell.2019.03.035
PMCID:
PMC6574124
AbstractArticlePDF–1.9M
5.
BK channel density is regulated by endoplasmic reticulum associated degradation and influenced by the SKN-1A/NRF1 transcription factor
Timothy P. Cheung, Jun-Yong Choe, Janet E. Richmond, Hongkyun Kim
PLoS Genet. 2020 Jun; 16(6): e1008829. Published online 2020 Jun 5. doi: 10.1371/journal.pgen.1008829
PMCID:
PMC7299407
AbstractArticlePDF–3.7M
6.
Endoplasmic reticulum-associated SKN-1A/Nrf1 mediates a cytoplasmic unfolded protein response and promotes longevity
Nicolas J Lehrbach, Gary Ruvkun
eLife. 2019; 8: e44425. Published online 2019 Apr 11. doi: 10.7554/eLife.44425
PMCID:
PMC6459674
AbstractArticlePDF–3.9M
7.
Rewiring of the ubiquitinated proteome determines ageing in C. elegans
Seda Koyuncu, Rute Loureiro, Hyun Ju Lee, Prerana Wagle, Marcus Krueger, David Vilchez
Nature. 2021; 596(7871): 285–290. Published online 2021 Jul 28. doi: 10.1038/s41586-021-03781-z
Correction in:
Nature. 2024; 626(8001): E20.
PMCID:
PMC8357631
AbstractArticlePDF–9.2M
8.
RNA Targets and Specificity of Staufen, a Double-stranded RNA-binding Protein in Caenorhabditis elegans
Jacqueline Baca LeGendre, Zachary T. Campbell, Peggy Kroll-Conner, Phil Anderson, Judith Kimble, Marvin Wickens
J Biol Chem. 2013 Jan 25; 288(4): 2532–2545. Published online 2012 Nov 29. doi: 10.1074/jbc.M112.397349
PMCID:
PMC3554921
AbstractArticlePDF–2.3M
9.
In Vivo Interaction Proteomics in Caenorhabditis elegans Embryos Provides New Insights into P Granule Dynamics
Jia-Xuan Chen, Patricia G. Cipriani, Desirea Mecenas, Jolanta Polanowska, Fabio Piano, Kristin C. Gunsalus, Matthias Selbach
Mol Cell Proteomics. 2016 May; 15(5): 1642–1657. Published online 2016 Feb 24. doi: 10.1074/mcp.M115.053975
PMCID:
PMC4858945
AbstractArticlePDF–3.1M
10.
Empirically-controlled mapping of the Caenorhabditis elegans protein-protein interactome network
Nicolas Simonis, Jean-François Rual, Anne-Ruxandra Carvunis, Murat Tasan, Irma Lemmens, Tomoko Hirozane-Kishikawa, Tong Hao, Julie M Sahalie, Kavitha Venkatesan, Fana Gebreab, Sebiha Cevik, Niels Klitgord, Changyu Fan, Pascal Braun, Ning Li, Nono Ayivi-Guedehoussou, Elizabeth Dann, Nicolas Bertin, David Szeto, Amélie Dricot, Muhammed A Yildirim, Chenwei Lin, Anne-Sophie de Smet, Huey-Ling Kao, Christophe Simon, Alex Smolyar, Jin Sook Ahn, Muneesh Tewari, Mike Boxem, Stuart Milstein, Haiyuan Yu, Matija Dreze, Jean Vandenhaute, Kristin C Gunsalus, Michael E Cusick, David E Hill, Jan Tavernier, Frederick P Roth, Marc Vidal
Nat Methods. Author manuscript; available in PMC 2011 Mar 15.
Published in final edited form as: Nat Methods. 2009 Jan; 6(1): 47–54. doi: 10.1038/nmeth.1279
PMCID:
PMC3057923
AbstractArticlePDF–3.0M
11.
A Map of the Interactome Network of the Metazoan C. elegans
Siming Li, Christopher M. Armstrong, Nicolas Bertin, Hui Ge, Stuart Milstein, Mike Boxem, Pierre-Olivier Vidalain, Jing-Dong J. Han, Alban Chesneau, Tong Hao, Debra S. Goldberg, Ning Li, Monica Martinez, Jean-François Rual, Philippe Lamesch, Lai Xu, Muneesh Tewari, Sharyl L. Wong, Lan V. Zhang, Gabriel F. Berriz, Laurent Jacotot, Philippe Vaglio, Jérôme Reboul, Tomoko Hirozane-Kishikawa, Qianru Li, Harrison W. Gabel, Ahmed Elewa, Bridget Baumgartner, Debra J. Rose, Haiyuan Yu, Stephanie Bosak, Reynaldo Sequerra, Andrew Fraser, Susan E. Mango, William M. Saxton, Susan Strome, Sander van den Heuvel, Fabio Piano, Jean Vandenhaute, Claude Sardet, Mark Gerstein, Lynn Doucette-Stamm, Kristin C. Gunsalus, J. Wade Harper, Michael E. Cusick, Frederick P. Roth, David E. Hill, Marc Vidal
Science. Author manuscript; available in PMC 2006 Dec 14.
Published in final edited form as: Science. 2004 Jan 23; 303(5657): 540–543. Published online 2004 Jan 2. doi: 10.1126/science.1091403
PMCID:
PMC1698949
AbstractArticlePDF–1.4M
12.
EPIC: Software Toolkit for Elution Profile-Based Inference of Protein Complexes
Lucas ZhongMing Hu, Florian Goebels, June H. Tan, Eric Wolf, Uros Kuzmanov, Cuihong Wan, Sadhna Phanse, Changjiang Xu, Mike Schertzberg, Andrew G. Fraser, Gary D. Bader, Andrew Emili
Nat Methods. Author manuscript; available in PMC 2021 Mar 26.
Published in final edited form as: Nat Methods. 2019 Aug; 16(8): 737–742. Published online 2019 Jul 15. doi: 10.1038/s41592-019-0461-4
PMCID:
PMC7995176
AbstractArticlePDF–1.0M
13.
OrthoList: A Compendium of C. elegans Genes with Human Orthologs
Daniel D. Shaye, Iva Greenwald
PLoS One. 2011; 6(5): e20085. Published online 2011 May 25. doi: 10.1371/journal.pone.0020085
Correction in:
PLoS One. 2014; 9(1): 10.1371/annotation/f5ffb738-a176-4a43-b0e0-249cdea45fe0.
PMCID:
PMC3102077
AbstractArticlePDF–530K
14.
OrthoList 2: A New Comparative Genomic Analysis of Human and Caenorhabditis elegans Genes
Woojin Kim, Ryan S. Underwood, Iva Greenwald, Daniel D. Shaye
Genetics. 2018 Oct; 210(2): 445–461. Published online 2018 Aug 17. doi: 10.1534/genetics.118.301307
PMCID:
PMC6216590
AbstractArticlePDF–1.4M

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