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Select item 101226381.

A Circular RNA Expressed from the FAT3 Locus Regulates Neural Development

Sabine Seeler, Maria Schertz Andersen, Tamas Sztanka-Toth, Mateja Rybiczka-Tešulov, Marleen H. van den Munkhof, Chi-Chih Chang, Muyesier Maimaitili, Morten Trillingsgaard Venø, Thomas Birkballe Hansen, R. Jeroen Pasterkamp, Agnieszka Rybak-Wolf, Mark Denham, Nikolaus Rajewsky, Lasse Sommer Kristensen, Jørgen Kjems

Mol Neurobiol. 2023; 60(6): 3239–3260. Published online 2023 Feb 25. doi: 10.1007/s12035-023-03253-7

PMCID:: PMC10122638

Abstract Article PDF–5.9M

Select item 68346312.

Fat cadherins in mouse models of degenerative ataxias

Olga Baron, Denise Grieshober, Catarina Dias, Manolis Fanto

Sci Rep. 2019; 9: 16155. Published online 2019 Nov 6. doi: 10.1038/s41598-019-52684-7

PMCID:: PMC6834631

Abstract Article PDF–2.9M

Select item 48243903.

Defective Angiogenesis and Intraretinal Bleeding in Mouse Models With Disrupted Inner Retinal Lamination

Aaron B. Simmons, Morgan M. Merrill, Justin C. Reed, Michael R. Deans, Malia M. Edwards, Peter G. Fuerst

Invest Ophthalmol Vis Sci. 2016 Apr; 57(4): 1563–1577. Published online 2016 Apr 5. doi: 10.1167/iovs.15-18395

PMCID:: PMC4824390

Abstract Article PDF–3.7M

Select item 49201754.

Fat3 and Ena/VASP proteins influence the emergence of asymmetric cell morphology in the developing retina

Alexandra Krol, Steven J. Henle, Lisa V. Goodrich

Development. 2016 Jun 15; 143(12): 2172–2182. doi: 10.1242/dev.133678

PMCID:: PMC4920175

Abstract Article

Select item 94277585.

Fat3 regulates neural progenitor cells by promoting Yap activity during spinal cord development

Soyeon Seo, Young A. Kim, Junekyoung Lee, Seunghwan Lee, Jumee Kim, Seunghee Lee

Sci Rep. 2022; 12: 14726. Published online 2022 Aug 30. doi: 10.1038/s41598-022-19029-3

PMCID:: PMC9427758

Abstract Article PDF–2.5M

Select item 33281806.

Functional interactions between Fat family cadherins in tissue morphogenesis and planar polarity

Sakura Saburi, Ian Hester, Lisa Goodrich, Helen McNeill

Development. 2012 May 15; 139(10): 1806–1820. doi: 10.1242/dev.077461

PMCID:: PMC3328180

Abstract Article

Select item 88650547.

Fat3 acts through independent cytoskeletal effectors to coordinate asymmetric cell behaviors during polarized circuit assembly

Evelyn C. Avilés, Alexandra Krol, Steven J. Henle, Jessica Burroughs-Garcia, Michael R. Deans, Lisa V. Goodrich

Cell Rep. Author manuscript; available in PMC 2022 Feb 23.

Published in final edited form as: Cell Rep. 2022 Feb 1; 38(5): 110307. doi: 10.1016/j.celrep.2022.110307

PMCID:: PMC8865054

Abstract Article PDF–2.4M

Select item 77144058.

Requirement of FAT and DCHS protocadherins during hypothalamic-pituitary development

Emily J. Lodge, Paraskevi Xekouki, Tatiane S. Silva, Cristiane Kochi, Carlos A. Longui, Fabio R. Faucz, Alice Santambrogio, James L. Mills, Nathan Pankratz, John Lane, Dominika Sosnowska, Tina Hodgson, Amanda L. Patist, Philippa Francis-West, Françoise Helmbacher, Constantine A. Stratakis, Cynthia L. Andoniadou

JCI Insight. 2020 Dec 3; 5(23): e134310. Published online 2020 Dec 3. doi: 10.1172/jci.insight.134310

PMCID:: PMC7714405

Abstract Article PDF–36M

Select item 35215869.

Control of neuronal morphology by the atypical cadherin Fat3

Michael R. Deans, Alexandra Krol, Victoria E. Abraira, Catherine O. Copley, Andrew F. Tucker, Lisa V. Goodrich

Neuron. Author manuscript; available in PMC 2012 Dec 13.

Published in final edited form as: Neuron. 2011 Sep 8; 71(5): 820–832. doi: 10.1016/j.neuron.2011.06.026

PMCID:: PMC3521586

Abstract Article PDF–6.1M

Select item 757505610.

Analysis of FGF20-regulated genes in organ of Corti progenitors by translating ribosome affinity purification

Lu M. Yang, Lisa Stout, Michael Rauchman, David M. Ornitz

Dev Dyn. Author manuscript; available in PMC 2021 Oct 1.

Published in final edited form as: Dev Dyn. 2020 Oct; 249(10): 1217–1242. Published online 2020 Jul 10. doi: 10.1002/dvdy.211

PMCID:: PMC7575056

Abstract Article PDF–4.1M

Select item 544875011.

A dual-strategy expression screen for candidate connectivity labels in the developing thalamus

Olivia Bibollet-Bahena, Tatsuya Okafuji, Karsten Hokamp, Guy Tear, Kevin J. Mitchell

PLoS One. 2017; 12(5): e0177977. Published online 2017 May 30. doi: 10.1371/journal.pone.0177977

PMCID:: PMC5448750

Abstract Article PDF–113M

Select item 359383312.

The protomap is propagated to cortical plate neurons through an Eomes-dependent intermediate map

Gina E. Elsen, Rebecca D. Hodge, Francesco Bedogni, Ray A. M. Daza, Branden R. Nelson, Naoko Shiba, Steven L. Reiner, Robert F. Hevner

Proc Natl Acad Sci U S A. 2013 Mar 5; 110(10): 4081–4086. Published online 2013 Feb 19. doi: 10.1073/pnas.1209076110

PMCID:: PMC3593833

Abstract Article PDF–1.0M

Select item 144960413.

Comparative Genomics and Diversifying Selection of the Clustered Vertebrate Protocadherin Genes

Qiang Wu

Genetics. 2005 Apr; 169(4): 2179–2188. doi: 10.1534/genetics.104.037606

PMCID:: PMC1449604

Abstract Article PDF–562K

Select item 431955914.

A high resolution spatiotemporal atlas of gene expression of the developing mouse brain

Carol L. Thompson, Lydia Ng, Vilas Menon, Salvador Martinez, Chang-Kyu Lee, Katie Glattfelder, Susan M. Sunkin, Alex Henry, Christopher Lau, Chinh Dang, Raquel Garcia-Lopez, Almudena Martinez-Ferre, Ana Pombero, John L.R. Rubenstein, Wayne B. Wakeman, John Hohmann, Nick Dee, Andrew J. Sodt, Rob Young, Kimberly Smith, Thuc-Nghi Nguyen, Jolene Kidney, Leonard Kuan, Andreas Jeromin, Ajamete Kaykas, Jeremy Miller, Damon Page, Geri Orta, Amy Bernard, Zackery Riley, Simon Smith, Paul Wohnoutka, Mike Hawrylycz, Luis Puelles, Allan R. Jones

Neuron. Author manuscript; available in PMC 2015 Jul 16.

Published in final edited form as: Neuron. 2014 Jul 16; 83(2): 309–323. Published online 2014 Jun 19. doi: 10.1016/j.neuron.2014.05.033

PMCID:: PMC4319559

Abstract Article PDF–3.0M

Select item 831323915.

Cell-Type-Specific Gene Expression in Developing Mouse Neocortex: Intermediate Progenitors Implicated in Axon Development

Francesco Bedogni, Robert F. Hevner

Front Mol Neurosci. 2021; 14: 686034. Published online 2021 Jul 12. doi: 10.3389/fnmol.2021.686034

PMCID:: PMC8313239

Abstract Article PDF–1.6M

Select item 141356816.

BGEM: An In Situ Hybridization Database of Gene Expression in the Embryonic and Adult Mouse Nervous System

Susan Magdaleno, Patricia Jensen, Craig L Brumwell, Anna Seal, Karen Lehman, Andrew Asbury, Tony Cheung, Tommie Cornelius, Diana M Batten, Christopher Eden, Shannon M Norland, Dennis S Rice, Nilesh Dosooye, Sundeep Shakya, Perdeep Mehta, Tom Curran

PLoS Biol. 2006 Apr; 4(4): e86. Published online 2006 Mar 28. doi: 10.1371/journal.pbio.0040086

PMCID:: PMC1413568

Article PDF–99K

Select item 1683317.

Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray

Tetsuya S. Tanaka, Saied A. Jaradat, Meng K. Lim, George J. Kargul, Xiaohong Wang, Marija J. Grahovac, Serafino Pantano, Yuri Sano, Yulan Piao, Ramaiah Nagaraja, Hirofumi Doi, William H. Wood, III, Kevin G. Becker, Minoru S. H. Ko

Proc Natl Acad Sci U S A. 2000 Aug 1; 97(16): 9127–9132. doi: 10.1073/pnas.97.16.9127

PMCID:: PMC16833

Abstract Article PDF–847K

Select item 1091766018.

Genetic determinants of micronucleus formation in vivo

D. J. Adams, B. Barlas, R. E. McIntyre, I. Salguero, L. van der Weyden, A. Barros, J. R. Vicente, N. Karimpour, A. Haider, M. Ranzani, G. Turner, N. A. Thompson, V. Harle, R. Olvera-León, C. D. Robles-Espinoza, A. O. Speak, N. Geisler, W. J. Weninger, S. H. Geyer, J. Hewinson, N. A. Karp, The Sanger Mouse Genetics Project, B. Fu, F. Yang, Z. Kozik, J. Choudhary, L. Yu, M. S. van Ruiten, B. D. Rowland, C. J. Lelliott, M. del Castillo Velasco-Herrera, R. Verstraten, L. Bruckner, A. G. Henssen, M. A. Rooimans, J. de Lange, T. J. Mohun, M. J. Arends, K. A. Kentistou, P. A. Coelho, Y. Zhao, H. Zecchini, J. R. B. Perry, S. P. Jackson, G. Balmus

Nature. 2024; 627(8002): 130–136. Published online 2024 Feb 14. doi: 10.1038/s41586-023-07009-0

PMCID:: PMC10917660

Abstract Article PDF–4.8M

Select item 302253419.

A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo

Graciana Diez-Roux, Sandro Banfi, Marc Sultan, Lars Geffers, Santosh Anand, David Rozado, Alon Magen, Elena Canidio, Massimiliano Pagani, Ivana Peluso, Nathalie Lin-Marq, Muriel Koch, Marchesa Bilio, Immacolata Cantiello, Roberta Verde, Cristian De Masi, Salvatore A. Bianchi, Juliette Cicchini, Elodie Perroud, Shprese Mehmeti, Emilie Dagand, Sabine Schrinner, Asja Nürnberger, Katja Schmidt, Katja Metz, Christina Zwingmann, Norbert Brieske, Cindy Springer, Ana Martinez Hernandez, Sarah Herzog, Frauke Grabbe, Cornelia Sieverding, Barbara Fischer, Kathrin Schrader, Maren Brockmeyer, Sarah Dettmer, Christin Helbig, Violaine Alunni, Marie-Annick Battaini, Carole Mura, Charlotte N. Henrichsen, Raquel Garcia-Lopez, Diego Echevarria, Eduardo Puelles, Elena Garcia-Calero, Stefan Kruse, Markus Uhr, Christine Kauck, Guangjie Feng, Nestor Milyaev, Chuang Kee Ong, Lalit Kumar, MeiSze Lam, Colin A. Semple, Attila Gyenesei, Stefan Mundlos, Uwe Radelof, Hans Lehrach, Paolo Sarmientos, Alexandre Reymond, Duncan R. Davidson, Pascal Dollé, Stylianos E. Antonarakis, Marie-Laure Yaspo, Salvador Martinez, Richard A. Baldock, Gregor Eichele, Andrea Ballabio

PLoS Biol. 2011 Jan; 9(1): e1000582. Published online 2011 Jan 18. doi: 10.1371/journal.pbio.1000582

PMCID:: PMC3022534

Abstract Article PDF–3.8M

Select item 31099220.

RIKEN Integrated Sequence Analysis (RISA) System—384-Format Sequencing Pipeline with 384 Multicapillary Sequencer

Kazuhiro Shibata, Masayoshi Itoh, Katsunori Aizawa, Sumiharu Nagaoka, Nobuya Sasaki, Piero Carninci, Hideaki Konno, Junichi Akiyama, Katsuo Nishi, Tokuji Kitsunai, Hideo Tashiro, Mari Itoh, Noriko Sumi, Yoshiyuki Ishii, Shin Nakamura, Makoto Hazama, Tsutomu Nishine, Akira Harada, Rintaro Yamamoto, Hiroyuki Matsumoto, Sumito Sakaguchi, Takashi Ikegami, Katsuya Kashiwagi, Syuji Fujiwake, Kouji Inoue, Yoshiyuki Togawa, Masaki Izawa, Eiji Ohara, Masanori Watahiki, Yuko Yoneda, Tomokazu Ishikawa, Kaori Ozawa, Takumi Tanaka, Shuji Matsuura, Jun Kawai, Yasushi Okazaki, Masami Muramatsu, Yorinao Inoue, Akira Kira, Yoshihide Hayashizaki

Genome Res. 2000 Nov; 10(11): 1757–1771. doi: 10.1101/gr.152600

PMCID:: PMC310992

Abstract Article PDF–3.4M

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