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Select item 90508741.

Generation of a zebrafish knock-in line expressing MYC-tagged Sox11a using CRISPR/Cas9 genome editing

Laura A. Krueger, Ann C. Morris

Biochem Biophys Res Commun. Author manuscript; available in PMC 2023 Jun 11.

Published in final edited form as: Biochem Biophys Res Commun. 2022 Jun 11; 608: 8–13. Published online 2022 Mar 28. doi: 10.1016/j.bbrc.2022.03.103

PMCID:: PMC9050874

Abstract Article PDF–1.3M

Select item 55675432.

Expression of SoxC Transcription Factors during Zebrafish Retinal and Optic Nerve Regeneration

Zhaoxia Mu, Shuqiang Zhang, Chunjiao He, Haitao Hou, Dong Liu, Nan Hu, Hui Xu

Neurosci Bull. 2017 Feb; 33(1): 53–61. Published online 2016 Oct 14. doi: 10.1007/s12264-016-0073-2

PMCID:: PMC5567543

Abstract Article PDF–11M

Select item 79283003.

Efficient CRISPR-Cas9-Mediated Knock-In of Composite Tags in Zebrafish Using Long ssDNA as a Donor

Deshani C. Ranawakage, Keita Okada, Kota Sugio, Yuya Kawaguchi, Yuki Kuninobu-Bonkohara, Takuya Takada, Yusuke Kamachi

Front Cell Dev Biol. 2020; 8: 598634. Published online 2021 Feb 11. doi: 10.3389/fcell.2020.598634

PMCID:: PMC7928300

Abstract Article PDF–4.0M

Select item 61821664.

Parentally inherited long non-coding RNA Cyrano is involved in zebrafish neurodevelopment

Mayuresh Anant Sarangdhar, Divya Chaubey, Nagesh Srikakulam, Beena Pillai

Nucleic Acids Res. 2018 Oct 12; 46(18): 9726–9735. Published online 2018 Jul 13. doi: 10.1093/nar/gky628

Correction in:: Nucleic Acids Res. 2022 Sep 9; 50(16): 9596.

PMCID:: PMC6182166

Abstract Article PDF–8.1M

Select item 93964995.

Sox11b regulates the migration and fate determination of Müller glia-derived progenitors during retina regeneration in zebrafish

Kaida Song, Zihao Lin, Lining Cao, Bowen Lu, Yuxi Chen, Shuqiang Zhang, Jianfeng Lu, Hui Xu

Neural Regen Res. 2023 Feb; 18(2): 445–450. Published online 2022 Jul 1. doi: 10.4103/1673-5374.346550

PMCID:: PMC9396499

Abstract Article PDF–4.8M

Select item 26892706.

Sox genes in grass carp (Ctenopharyngodon idella) with their implications for genome duplication and evolution

Lei Zhong, Xiaomu Yu, Jingou Tong

Genet Sel Evol. 2006; 38(6): 673–687. Published online 2006 Nov 28. doi: 10.1186/1297-9686-38-6-673

PMCID:: PMC2689270

Summary PDF–690K

Select item 87412737.

Single-cell transcriptomic analysis of zebrafish cranial neural crest reveals spatiotemporal regulation of lineage decisions during development

David Tatarakis, Zixuan Cang, Xiaojun Wu, Praveer P. Sharma, Matthew Karikomi, Adam L. MacLean, Qing Nie, Thomas F. Schilling

Cell Rep. Author manuscript; available in PMC 2022 Jan 7.

Published in final edited form as: Cell Rep. 2021 Dec 21; 37(12): 110140. doi: 10.1016/j.celrep.2021.110140

PMCID:: PMC8741273

Abstract Article PDF–3.6M

Select item 59174118.

Transcriptional Profiling of Caudal Fin Regeneration in Zebrafish

Michael Schebesta, Ching-Ling Lien, Felix B. Engel, Mark T. Keating

ScientificWorldJournal. 2006; 6: 38–54. Published online 2006 Jun 2. doi: 10.1100/tsw.2006.326

PMCID:: PMC5917411

Abstract PDF–1.9M

Select item 44523079.

Sequencing and De Novo Assembly of the Gonadal Transcriptome of the Endangered Chinese Sturgeon (Acipenser sinensis)

Huamei Yue, Chuangju Li, Hao Du, Shuhuan Zhang, Qiwei Wei

PLoS One. 2015; 10(6): e0127332. Published online 2015 Jun 1. doi: 10.1371/journal.pone.0127332

PMCID:: PMC4452307

Abstract Article PDF–2.6M

Select item 308017610.

Microarray Analysis of XOPS-mCFP Zebrafish Retina Identifies Genes Associated with Rod Photoreceptor Degeneration and Regeneration

Ann C. Morris, Marie A. Forbes-Osborne, Lakshmi S. Pillai, James M. Fadool

Invest Ophthalmol Vis Sci. 2011 Apr; 52(5): 2255–2266. Published online 2011 Apr 6. doi: 10.1167/iovs.10-6022

PMCID:: PMC3080176

Abstract Article PDF–2.9M

Select item 739933811.

Sox Gene Family Revealed Genetic Variations in Autotetraploid Carassius auratus

Xu Huang, Chang Wu, Kaijun Gong, Qian Chen, Qianhong Gu, Huan Qin, Chun Zhao, Tingting Yu, Li Yang, Wen Fu, Yude Wang, Qinbo Qin, Shaojun Liu

Front Genet. 2020; 11: 804. Published online 2020 Jul 28. doi: 10.3389/fgene.2020.00804

PMCID:: PMC7399338

Abstract Article PDF–6.2M

Select item 268594512.

Tcf3 inhibits spinal cord neurogenesis by regulating sox4a expression

Suzanna L. Gribble, Hyung-Seok Kim, Jennifer Bonner, Xu Wang, Richard I. Dorsky

Development. 2009 Mar 1; 136(5): 781–789. Published online 2009 Jan 28. doi: 10.1242/dev.027995

PMCID:: PMC2685945

Abstract Article

Select item 433950913.

Sox4 regulates choroid fissure closure by limiting Hedgehog signaling during ocular morphogenesis

Wen Wen, Lakshmi Pillai-Kastoori, Stephen G. Wilson, Ann C. Morris

Dev Biol. Author manuscript; available in PMC 2016 Mar 1.

Published in final edited form as: Dev Biol. 2015 Mar 1; 399(1): 139–153. Published online 2014 Dec 31. doi: 10.1016/j.ydbio.2014.12.026

PMCID:: PMC4339509

Abstract Article PDF–2.7M

Select item 893466314.

Key sequence features of CRISPR RNA for dual-guide CRISPR-Cas9 ribonucleoprotein complexes assembled with wild-type or HiFi Cas9

Keita Okada, Kanae Aoki, Teruyuki Tabei, Kota Sugio, Katsunori Imai, Yuki Bonkohara, Yusuke Kamachi

Nucleic Acids Res. 2022 Mar 21; 50(5): 2854–2871. Published online 2022 Feb 15. doi: 10.1093/nar/gkac100

PMCID:: PMC8934663

Abstract Article PDF–1.7M

Select item 807671715.

Genome wide identification, phylogeny, and synteny analysis of sox gene family in common carp (Cyprinus carpio)

Imran Zafar, Rida Iftikhar, Syed Umair Ahmad, Mohd Ashraf Rather

Biotechnol Rep (Amst) 2021 Jun; 30: e00607. Published online 2021 Mar 16. doi: 10.1016/j.btre.2021.e00607

PMCID:: PMC8076717

Abstract Article PDF–6.1M

Select item 754571416.

Multiple Developmental Defects in sox11a Mutant Zebrafish with Features of Coffin-Siris Syndrome

Shaoting Jia, Xingxing Wu, Yunya Wu, Xuefan Cui, Binbin Tao, Zuoyan Zhu, Wei Hu

Int J Biol Sci. 2020; 16(15): 3039–3049. Published online 2020 Oct 3. doi: 10.7150/ijbs.47510

PMCID:: PMC7545714

Abstract Article PDF–2.8M

Select item 409178617.

Sox11 Is Required to Maintain Proper Levels of Hedgehog Signaling during Vertebrate Ocular Morphogenesis

Lakshmi Pillai-Kastoori, Wen Wen, Stephen G. Wilson, Erin Strachan, Adriana Lo-Castro, Marco Fichera, Sebastiano A. Musumeci, Ordan J. Lehmann, Ann C. Morris

PLoS Genet. 2014 Jul; 10(7): e1004491. Published online 2014 Jul 10. doi: 10.1371/journal.pgen.1004491

PMCID:: PMC4091786

Abstract Article PDF–8.8M

Select item 294179918.

Positive regulation of c-Myc by cohesin is direct, and evolutionarily conserved

Jenny M. Rhodes, Fiona K. Bentley, Cristin G. Print, Dale Dorsett, Ziva Misulovin, Emma J. Dickinson, Kathryn E. Crosier, Philip S. Crosier, Julia A. Horsfield

Dev Biol. Author manuscript; available in PMC 2011 Aug 15.

Published in final edited form as: Dev Biol. 2010 Aug 15; 344(2): 637–649. Published online 2010 May 27. doi: 10.1016/j.ydbio.2010.05.493