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Items: 1 to 20 of 28

1.
A short motif in Drosophila SECIS Binding Protein 2 provides differential binding affinity to SECIS RNA hairpins
Akiko Takeuchi, David Schmitt, Charles Chapple, Elena Babaylova, Galina Karpova, Roderic Guigo, Alain Krol, Christine Allmang
Nucleic Acids Res. 2009 Apr; 37(7): 2126–2141. Published online 2009 Feb 17. doi: 10.1093/nar/gkp078
PMCID:
PMC2673426
AbstractArticlePDF–9.7M
2.
Analyses of Fruit Flies That Do Not Express Selenoproteins or Express the Mouse Selenoprotein, Methionine Sulfoxide Reductase B1, Reveal a Role of Selenoproteins in Stress Resistance
Valentina A. Shchedrina, Hadise Kabil, Gerd Vorbruggen, Byung Cheon Lee, Anton A. Turanov, Mitsuko Hirosawa-Takamori, Hwa-Young Kim, Lawrence G. Harshman, Dolph L. Hatfield, Vadim N. Gladyshev
J Biol Chem. 2011 Aug 26; 286(34): 29449–29461. Published online 2011 May 27. doi: 10.1074/jbc.M111.257600
PMCID:
PMC3190985
AbstractArticlePDF–2.6M
3.
A novel stem loop control element-dependent UGA read-through system without translational selenocysteine incorporation in Drosophila
Mitsuko Hirosawa-Takamori, Dmitri Ossipov, Sergey V. Novoselov, Anton A. Turanov, Yan Zhang, Vadim N. Gladyshev, Alain Krol, Gerd Vorbrüggen, Herbert Jäckle
FASEB J. 2009 Jan; 23(1): 107–113. doi: 10.1096/fj.08-116640
PMCID:
PMC2626620
AbstractArticle
4.
In silico identification of novel selenoproteins in the Drosophila melanogaster genome
Sergi Castellano, Nadya Morozova, Marta Morey, Marla J. Berry, Florenci Serras, Montserrat Corominas, Roderic Guigó
EMBO Rep. 2001 Aug 15; 2(8): 697–702. doi: 10.1093/embo-reports/kve151
PMCID:
PMC1083988
AbstractArticlePDF–366K
5.
The X-linked 1.688 Satellite in Drosophila melanogaster Promotes Specific Targeting by Painting of Fourth
Maria Kim, Samaneh Ekhteraei-Tousi, Jacob Lewerentz, Jan Larsson
Genetics. 2018 Feb; 208(2): 623–632. Published online 2017 Dec 12. doi: 10.1534/genetics.117.300581
PMCID:
PMC5788526
AbstractArticlePDF–1.2M
6.
Relaxation of Selective Constraints Causes Independent Selenoprotein Extinction in Insect Genomes
Charles E. Chapple, Roderic Guigó
PLoS One. 2008; 3(8): e2968. Published online 2008 Aug 13. doi: 10.1371/journal.pone.0002968
Correction in:
PLoS One. 2009; 4(7): 10.1371/annotation/93ab40c4-c4b0-4f77-a18f-804b74825fb7.
PMCID:
PMC2500217
AbstractArticlePDF–1.5M
7.
Targeting of Painting of fourth to roX1 and roX2 Proximal Sites Suggests Evolutionary Links Between Dosage Compensation and the Regulation of the fourth Chromosome in Drosophila melanogaster
Lina E. Lundberg, Maria Kim, Anna-Mia Johansson, Marie-Line Faucillion, Rafael Josupeit, Jan Larsson
G3 (Bethesda) 2013 Aug; 3(8): 1325–1334. Published online 2013 Aug 1. doi: 10.1534/g3.113.006866
PMCID:
PMC3737172
AbstractArticlePDF–1.5M
8.
The bHLH Transcription Factor Hand Regulates the Expression of Genes Critical to Heart and Muscle Function in Drosophila melanogaster
Benjamin Hallier, Julia Hoffmann, Thomas Roeder, Markus Tögel, Heiko Meyer, Achim Paululat
PLoS One. 2015; 10(8): e0134204. Published online 2015 Aug 7. doi: 10.1371/journal.pone.0134204
PMCID:
PMC4529270
AbstractArticlePDF–1.5M
9.
Seizure control through genetic and pharmacological manipulation of Pumilio in Drosophila: a key component of neuronal homeostasis
Wei-Hsiang Lin, Carlo N. G. Giachello, Richard A. Baines
Dis Model Mech. 2017 Feb 1; 10(2): 141–150. doi: 10.1242/dmm.027045
PMCID:
PMC5312004
AbstractArticle
10.
Next-generation large-scale binary protein interaction network for Drosophila melanogaster
Hong-Wen Tang, Kerstin Spirohn, Yanhui Hu, Tong Hao, István A. Kovács, Yue Gao, Richard Binari, Donghui Yang-Zhou, Kenneth H. Wan, Joel S. Bader, Dawit Balcha, Wenting Bian, Benjamin W. Booth, Atina G. Coté, Steffi de Rouck, Alice Desbuleux, Kah Yong Goh, Dae-Kyum Kim, Jennifer J. Knapp, Wen Xing Lee, Irma Lemmens, Cathleen Li, Mian Li, Roujia Li, Hyobin Julianne Lim, Yifang Liu, Katja Luck, Dylan Markey, Carl Pollis, Sudharshan Rangarajan, Jonathan Rodiger, Sadie Schlabach, Yun Shen, Dayag Sheykhkarimli, Bridget TeeKing, Frederick P. Roth, Jan Tavernier, Michael A. Calderwood, David E. Hill, Susan E. Celniker, Marc Vidal, Norbert Perrimon, Stephanie E. Mohr
Nat Commun. 2023; 14: 2162. Published online 2023 Apr 15. doi: 10.1038/s41467-023-37876-0
PMCID:
PMC10105736
AbstractArticlePDF–3.2M
11.
Genome-wide phenotypic RNAi screen in the Drosophila wing: phenotypic description of functional classes
Ana López-Varea, Patricia Vega-Cuesta, Ana Ruiz-Gómez, Cristina M Ostalé, Cristina Molnar, Covadonga F Hevia, Mercedes Martín, Maria F Organista, Jesus de Celis, Joaquín Culí, Nuria Esteban, Jose F de Celis
G3 (Bethesda) 2021 Dec; 11(12): jkab349. Published online 2021 Oct 2. doi: 10.1093/g3journal/jkab349
PMCID:
PMC8664486
AbstractArticlePDF–3.1M
12.
mRNA-Associated Processes and Their Influence on Exon-Intron Structure in Drosophila melanogaster
Gildas Lepennetier, Francesco Catania
G3 (Bethesda) 2016 Jun; 6(6): 1617–1626. Published online 2016 Mar 28. doi: 10.1534/g3.116.029231
PMCID:
PMC4889658
AbstractArticlePDF–1.5M
13.
A global in vivo Drosophila RNAi screen identifies NOT3 as a conserved regulator of heart function
G. Gregory Neely, Keiji Kuba, Anthony Cammarato, Kazuya Isobe, Sabine Amann, Liyong Zhang, Mitsushige Murata, Lisa Elmén, Vaijayanti Gupta, Suchir Arora, Rinku Sarangi, Debasis Dan, Susumu Fujisawa, Takako Usami, Cui-ping Xia, Alex C. Keene, Nakissa N. Alayari, Hiroyuki Yamakawa, Ulrich Elling, Christian Berger, Maria Novatchkova, Rubina Koglgruber, Keiichi Fukuda, Hiroshi Nishina, Mitsuaki Isobe, J. Andrew Pospisilik, Yumiko Imai, Arne Pfeufer, Andrew A Hicks, Peter P. Pramstaller, Sai Subramaniam, Akinori Kimura, Karen Ocorr, Rolf Bodmer, Josef M. Penninger
Cell. Author manuscript; available in PMC 2011 Apr 2.
Published in final edited form as: Cell. 2010 Apr 2; 141(1): 142–153. doi: 10.1016/j.cell.2010.02.023
PMCID:
PMC2855221
AbstractArticlePDF–5.3M
14.
A genome-wide Drosophila screen for heat nociception identifies α2δ3 as an evolutionary-conserved pain gene
G. Gregory Neely, Andreas Hess, Michael Costigan, Alex C. Keene, Spyros Goulas, Michiel Langeslag, Robert S Griffin, Inna Belfer, Feng Dai, Shad Smith, Luda Diatchenko, Vaijayanti Gupta, Cui-ping Xia, Sabina Amann, Silke Kreitz, Cornelia Heindl-Erdmann, Susanne Wolz, Cindy V. Ly, Suchir Arora, Rinku Sarangi, Debasis Dan, Maria Novatchkova, Mark Rosenzweig, Dustin Gibson, Darwin Truong, Daniel Schramek, Tamara Zoranovic, Shane J. F. Cronin, Belinda Angjeli, Kay Brune, Georg Dietzl, William Maixner, Arabella Meixner, Winston Thomas, J. Andrew Pospisilik, Mattias Alenius, Michaela Kress, Sai Subramaniam, Paul A. Garrity, Hugo J. Bellen, Clifford J. Woolf, Josef M. Penninger
Cell. Author manuscript; available in PMC 2011 Nov 12.
Published in final edited form as: Cell. 2010 Nov 12; 143(4): 628–638. doi: 10.1016/j.cell.2010.09.047
PMCID:
PMC3040441
AbstractArticlePDF–2.0M
15.
High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression
Philippe Batut, Alexander Dobin, Charles Plessy, Piero Carninci, Thomas R. Gingeras
Genome Res. 2013 Jan; 23(1): 169–180. doi: 10.1101/gr.139618.112
PMCID:
PMC3530677
AbstractArticlePDF–1.5M
16.
Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species
Piero Sanfilippo, Jiayu Wen, Eric C. Lai
Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0
PMCID:
PMC5707805
AbstractArticlePDF–3.2M
17.
Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster
Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira
RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117
PMCID:
PMC5689002
AbstractArticlePDF–4.0M
18.
The Release 6 reference sequence of the Drosophila melanogaster genome
Roger A. Hoskins, Joseph W. Carlson, Kenneth H. Wan, Soo Park, Ivonne Mendez, Samuel E. Galle, Benjamin W. Booth, Barret D. Pfeiffer, Reed A. George, Robert Svirskas, Martin Krzywinski, Jacqueline Schein, Maria Carmela Accardo, Elisabetta Damia, Giovanni Messina, María Méndez-Lago, Beatriz de Pablos, Olga V. Demakova, Evgeniya N. Andreyeva, Lidiya V. Boldyreva, Marco Marra, A. Bernardo Carvalho, Patrizio Dimitri, Alfredo Villasante, Igor F. Zhimulev, Gerald M. Rubin, Gary H. Karpen, Susan E. Celniker
Genome Res. 2015 Mar; 25(3): 445–458. doi: 10.1101/gr.185579.114
PMCID:
PMC4352887
AbstractArticlePDF–1022K
19.
Sequence Finishing and Mapping of Drosophila melanogaster Heterochromatin
Roger A. Hoskins, Joseph W. Carlson, Cameron Kennedy, David Acevedo, Martha Evans-Holm, Erwin Frise, Kenneth H. Wan, Soo Park, Maria Mendez-Lago, Fabrizio Rossi, Alfredo Villasante, Patrizio Dimitri, Gary H. Karpen, Susan E. Celniker
Science. Author manuscript; available in PMC 2010 Feb 19.
Published in final edited form as: Science. 2007 Jun 15; 316(5831): 1625–1628. doi: 10.1126/science.1139816
PMCID:
PMC2825053
AbstractArticlePDF–858K
20.
The Release 5.1 Annotation of Drosophila melanogaster Heterochromatin
Christopher D. Smith, ShengQiang Shu, Christopher J. Mungall, Gary H. Karpen
Science. Author manuscript; available in PMC 2010 Feb 10.
Published in final edited form as: Science. 2007 Jun 15; 316(5831): 1586. doi: 10.1126/science.1139815
Correction in:
volume 317 on page 1325
PMCID:
PMC2819280
AbstractArticlePDF–1.3M

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