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Items: 1 to 20 of 32

1.
The Drosophila Dbf4 ortholog Chiffon forms a complex with Gcn5 that is necessary for histone acetylation and viability
Eliana F. Torres-Zelada, Robert E. Stephenson, Aktan Alpsoy, Benjamin D. Anderson, Selene K. Swanson, Laurence Florens, Emily C. Dykhuizen, Michael P. Washburn, Vikki M. Weake
J Cell Sci. 2019 Jan 15; 132(2): jcs214072. Published online 2019 Jan 16. doi: 10.1242/jcs.214072
PMCID:
PMC6362396
AbstractArticle
2.
The SAGA core module is critical during Drosophila oogenesis and is broadly recruited to promoters
Jelly H. M. Soffers, Sergio G-M Alcantara, Xuanying Li, Wanqing Shao, Christopher W. Seidel, Hua Li, Julia Zeitlinger, Susan M. Abmayr, Jerry L. Workman
PLoS Genet. 2021 Nov; 17(11): e1009668. Published online 2021 Nov 22. doi: 10.1371/journal.pgen.1009668
PMCID:
PMC8648115
AbstractArticlePDF–2.8M
3.
Insights into SAGA function during gene expression
Susana Rodríguez-Navarro
EMBO Rep. 2009 Aug; 10(8): 843–850. Published online 2009 Jul 17. doi: 10.1038/embor.2009.168
PMCID:
PMC2726681
AbstractArticlePDF–1.7M
4.
Loss of Drosophila Ataxin-7, a SAGA subunit, reduces H2B ubiquitination and leads to neural and retinal degeneration
Ryan D. Mohan, George Dialynas, Vikki M. Weake, Jianqi Liu, Skylar Martin-Brown, Laurence Florens, Michael P. Washburn, Jerry L. Workman, Susan M. Abmayr
Genes Dev. 2014 Feb 1; 28(3): 259–272. doi: 10.1101/gad.225151.113
PMCID:
PMC3923968
AbstractArticlePDF–2.5M
5.
The Essential Gene wda Encodes a WD40 Repeat Subunit of Drosophila SAGA Required for Histone H3 Acetylation
Sebastián Guelman, Tamaki Suganuma, Laurence Florens, Vikki Weake, Selene K. Swanson, Michael P. Washburn, Susan M. Abmayr, Jerry L. Workman
Mol Cell Biol. 2006 Oct; 26(19): 7178–7189. doi: 10.1128/MCB.00130-06
PMCID:
PMC1592886
AbstractArticlePDF–1.0M
6.
Drosophila MCRS2 Associates with RNA Polymerase II Complexes To Regulate Transcription
Ditte Skovaa Andersen, Sunil Jayaramaiah Raja, Julien Colombani, Rachael Louise Shaw, Paul Francis Langton, Asifa Akhtar, Nicolas Tapon
Mol Cell Biol. 2010 Oct; 30(19): 4744–4755. Published online 2010 Aug 2. doi: 10.1128/MCB.01586-09
PMCID:
PMC2950527
AbstractArticlePDF–2.4M
7.
Distinct gene-selective roles for a network of core promoter factors in Drosophila neural stem cell identity
Alexandre Neves, Robert N. Eisenman
Biol Open. 2019 Apr 15; 8(4): bio042168. Published online 2019 Apr 15. doi: 10.1242/bio.042168
PMCID:
PMC6504003
AbstractArticlePDF–4.4M
8.
The spliceosomal protein SF3B5 is a novel component of Drosophila SAGA that functions in gene expression independent of splicing
Rachel Stegeman, Peyton J. Spreacker, Selene K. Swanson, Robert Stephenson, Laurence Florens, Michael P. Washburn, Vikki M. Weake
J Mol Biol. Author manuscript; available in PMC 2017 Sep 11.
Published in final edited form as: J Mol Biol. 2016 Sep 11; 428(18): 3632–3649. Published online 2016 May 13. doi: 10.1016/j.jmb.2016.05.009
PMCID:
PMC5011000
AbstractArticlePDF–1.3M
9.
A novel histone fold domain-containing protein that replaces TAF6 in Drosophila SAGA is required for SAGA-dependent gene expression
Vikki M. Weake, Selene K. Swanson, Arcady Mushegian, Laurence Florens, Michael P. Washburn, Susan M. Abmayr, Jerry L. Workman
Genes Dev. 2009 Dec 15; 23(24): 2818–2823. doi: 10.1101/gad.1846409
PMCID:
PMC2800089
AbstractArticlePDF–449K
10.
Epigenetic Regulation of ALS and CMT: A Lesson from Drosophila Models
Masamitsu Yamaguchi, Kentaro Omori, Satoshi Asada, Hideki Yoshida
Int J Mol Sci. 2021 Jan; 22(2): 491. Published online 2021 Jan 6. doi: 10.3390/ijms22020491
PMCID:
PMC7825332
AbstractArticlePDF–400K
11.
ATAC-king the complexity of SAGA during evolution
Gianpiero Spedale, H.Th. Marc Timmers, W.W.M. Pim Pijnappel
Genes Dev. 2012 Mar 15; 26(6): 527–541. doi: 10.1101/gad.184705.111
PMCID:
PMC3315114
AbstractArticlePDF–868K
12.
Post-transcription initiation function of the ubiquitous SAGA complex in tissue-specific gene activation
Vikki M. Weake, Jamie O. Dyer, Christopher Seidel, Andrew Box, Selene K. Swanson, Allison Peak, Laurence Florens, Michael P. Washburn, Susan M. Abmayr, Jerry L. Workman
Genes Dev. 2011 Jul 15; 25(14): 1499–1509. doi: 10.1101/gad.2046211
PMCID:
PMC3143940
AbstractArticlePDF–1.1M
13.
A Protein Complex Network of Drosophila melanogaster
K. G. Guruharsha, J. -F. Rual, B. Zhai, J. Mintseris, P. Vaidya, N. Vaidya, C. Beekman, C. Wong, D. Y. Rhee, O. Cenaj, E. McKillip, S. Shah, M. Stapleton, K. H. Wan, C. Yu, B. Parsa, J. W. Carlson, X. Chen, B. Kapadia, K. VijayRaghavan, S. P. Gygi, S. E. Celniker, R. A. Obar, S. Artavanis-Tsakonas
Cell. Author manuscript; available in PMC 2012 Oct 28.
Published in final edited form as: Cell. 2011 Oct 28; 147(3): 690–703. doi: 10.1016/j.cell.2011.08.047
PMCID:
PMC3319048
AbstractArticlePDF–3.2M
14.
Next-generation large-scale binary protein interaction network for Drosophila melanogaster
Hong-Wen Tang, Kerstin Spirohn, Yanhui Hu, Tong Hao, István A. Kovács, Yue Gao, Richard Binari, Donghui Yang-Zhou, Kenneth H. Wan, Joel S. Bader, Dawit Balcha, Wenting Bian, Benjamin W. Booth, Atina G. Coté, Steffi de Rouck, Alice Desbuleux, Kah Yong Goh, Dae-Kyum Kim, Jennifer J. Knapp, Wen Xing Lee, Irma Lemmens, Cathleen Li, Mian Li, Roujia Li, Hyobin Julianne Lim, Yifang Liu, Katja Luck, Dylan Markey, Carl Pollis, Sudharshan Rangarajan, Jonathan Rodiger, Sadie Schlabach, Yun Shen, Dayag Sheykhkarimli, Bridget TeeKing, Frederick P. Roth, Jan Tavernier, Michael A. Calderwood, David E. Hill, Susan E. Celniker, Marc Vidal, Norbert Perrimon, Stephanie E. Mohr
Nat Commun. 2023; 14: 2162. Published online 2023 Apr 15. doi: 10.1038/s41467-023-37876-0
PMCID:
PMC10105736
AbstractArticlePDF–3.2M
15.
mRNA-Associated Processes and Their Influence on Exon-Intron Structure in Drosophila melanogaster
Gildas Lepennetier, Francesco Catania
G3 (Bethesda) 2016 Jun; 6(6): 1617–1626. Published online 2016 Mar 28. doi: 10.1534/g3.116.029231
PMCID:
PMC4889658
AbstractArticlePDF–1.5M
16.
CRISPR-based modular assembly of a UAS-cDNA/ORF plasmid library for more than 5500 Drosophila genes conserved in humans
Ping Wei, Wen Xue, Yun Zhao, Guang Ning, Jiwu Wang
Genome Res. 2020 Jan; 30(1): 95–106. doi: 10.1101/gr.250811.119
PMCID:
PMC6961578
AbstractArticlePDF–3.6M
17.
Phylostratigraphic Bias Creates Spurious Patterns of Genome Evolution
Bryan A. Moyers, Jianzhi Zhang
Mol Biol Evol. 2015 Jan 1; 32(1): 258–267. Published online 2014 Oct 13. doi: 10.1093/molbev/msu286
Correction in:
Mol Biol Evol. 2016 Nov; 33(11): 3031.
PMCID:
PMC4271527
AbstractArticlePDF–618K
18.
A genome-wide Drosophila screen for heat nociception identifies α2δ3 as an evolutionary-conserved pain gene
G. Gregory Neely, Andreas Hess, Michael Costigan, Alex C. Keene, Spyros Goulas, Michiel Langeslag, Robert S Griffin, Inna Belfer, Feng Dai, Shad Smith, Luda Diatchenko, Vaijayanti Gupta, Cui-ping Xia, Sabina Amann, Silke Kreitz, Cornelia Heindl-Erdmann, Susanne Wolz, Cindy V. Ly, Suchir Arora, Rinku Sarangi, Debasis Dan, Maria Novatchkova, Mark Rosenzweig, Dustin Gibson, Darwin Truong, Daniel Schramek, Tamara Zoranovic, Shane J. F. Cronin, Belinda Angjeli, Kay Brune, Georg Dietzl, William Maixner, Arabella Meixner, Winston Thomas, J. Andrew Pospisilik, Mattias Alenius, Michaela Kress, Sai Subramaniam, Paul A. Garrity, Hugo J. Bellen, Clifford J. Woolf, Josef M. Penninger
Cell. Author manuscript; available in PMC 2011 Nov 12.
Published in final edited form as: Cell. 2010 Nov 12; 143(4): 628–638. doi: 10.1016/j.cell.2010.09.047
PMCID:
PMC3040441
AbstractArticlePDF–2.0M
19.
High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression
Philippe Batut, Alexander Dobin, Charles Plessy, Piero Carninci, Thomas R. Gingeras
Genome Res. 2013 Jan; 23(1): 169–180. doi: 10.1101/gr.139618.112
PMCID:
PMC3530677
AbstractArticlePDF–1.5M
20.
Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species
Piero Sanfilippo, Jiayu Wen, Eric C. Lai
Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0
PMCID:
PMC5707805
AbstractArticlePDF–3.2M

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