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Select item 48351111.

How Many Parameters Does It Take to Describe Disease Tolerance?

Alexander Louie, Kyung Han Song, Alejandra Hotson, Ann Thomas Tate, David S. Schneider

PLoS Biol. 2016 Apr; 14(4): e1002435. Published online 2016 Apr 18. doi: 10.1371/journal.pbio.1002435

Correction in:: PLoS Biol. 2016 Jun; 14(6): e1002485.

PMCID:: PMC4835111

Abstract Article PDF–2.3M

Select item 11424372.

Drosophila Activating Transcription Factor-2 Is Involved in Stress Response via Activation by p38, but Not c-Jun NH₂-Terminal Kinase

Yuji Sano, Hiroshi Akimaru, Tomoo Okamura, Tomoko Nagao, Masahiro Okada, Shunsuke Ishii

Mol Biol Cell. 2005 Jun; 16(6): 2934–2946. doi: 10.1091/mbc.E04-11-1008

PMCID:: PMC1142437

Abstract Article PDF–742K

Select item 46001163.

Infection Dynamics and Immune Response in a Newly Described Drosophila-Trypanosomatid Association

Phineas T. Hamilton, Jan Votýpka, Anna Dostálová, Vyacheslav Yurchenko, Nathan H. Bird, Julius Lukeš, Bruno Lemaitre, Steve J. Perlman

mBio. 2015 Sep-Oct; 6(5): e01356-15. Published online 2015 Sep 15. doi: 10.1128/mBio.01356-15

PMCID:: PMC4600116

Abstract Article PDF–1.8M

Select item 31173374.

A cautionary note for retrocopy identification: DNA-based duplication of intron-containing genes significantly contributes to the origination of single exon genes

Yong E. Zhang, Maria D. Vibranovski, Benjamin H. Krinsky, Manyuan Long

Bioinformatics. 2011 Jul 1; 27(13): 1749–1753. Published online 2011 May 5. doi: 10.1093/bioinformatics/btr280

PMCID:: PMC3117337

Abstract Article

Select item 12976505.

Genome-wide gene expression in response to parasitoid attack in Drosophila

Bregje Wertheim, Alex R Kraaijeveld, Eugene Schuster, Eric Blanc, Meirion Hopkins, Scott D Pletcher, Michael R Strand, Linda Partridge, H Charles J Godfray

Genome Biol. 2005; 6(11): R94. Published online 2005 Oct 31. doi: 10.1186/gb-2005-6-11-r94

PMCID:: PMC1297650

Abstract Article PDF–1.2M

Select item 39420266.

Evolution of a Cellular Immune Response in Drosophila: A Phenotypic and Genomic Comparative Analysis

Laura Salazar-Jaramillo, Angeliki Paspati, Louis van de Zande, Cornelis Joseph Vermeulen, Tanja Schwander, Bregje Wertheim

Genome Biol Evol. 2014 Feb; 6(2): 273–289. Published online 2014 Jan 18. doi: 10.1093/gbe/evu012

PMCID:: PMC3942026

Abstract Article PDF–1.0M

Select item 13563317.

Spotted-dick, a zinc-finger protein of Drosophila required for expression of Orc4 and S phase

Andrew R Page, Andras Kovacs, Peter Deak, Tibor Tőrők, Istvan Kiss, Paulo Dario, Cristina Bastos, Pedro Batista, Rui Gomes, Hiro Ohkura, Steven Russell, David M Glover

EMBO J. 2005 Dec 21; 24(24): 4304–4315. Published online 2005 Nov 24. doi: 10.1038/sj.emboj.7600890

PMCID:: PMC1356331

Abstract Article PDF–418K

Select item 54069808.

Inter- and intra-species variation in genome-wide gene expression of Drosophila in response to parasitoid wasp attack

Laura Salazar-Jaramillo, Kirsten M. Jalvingh, Ammerins de Haan, Ken Kraaijeveld, Henk Buermans, Bregje Wertheim

BMC Genomics. 2017; 18: 331. Published online 2017 Apr 27. doi: 10.1186/s12864-017-3697-3

PMCID:: PMC5406980

Abstract Article PDF–2.1M

Select item 63582149.

Building a platform for predicting functions of serine protease-related proteins in Drosophila melanogaster and other insects

Xiaolong Cao, Haobo Jiang

Insect Biochem Mol Biol. Author manuscript; available in PMC 2019 Dec 1.

Published in final edited form as: Insect Biochem Mol Biol. 2018 Dec; 103: 53–69. Published online 2018 Oct 24. doi: 10.1016/j.ibmb.2018.10.006

PMCID:: PMC6358214

Abstract Article PDF–6.9M

Select item 456802510.

Genes conserved in bilaterians but jointly lost with Myc during nematode evolution are enriched in cell proliferation and cell migration functions

Albert J. Erives

Dev Genes Evol. 2015; 225(5): 259–273. Published online 2015 Jul 15. doi: 10.1007/s00427-015-0508-1

PMCID:: PMC4568025

Abstract Article PDF–2.8M

Select item 492804711.

Cold acclimation wholly reorganizes the Drosophila melanogaster transcriptome and metabolome

Heath A. MacMillan, Jose M. Knee, Alice B. Dennis, Hiroko Udaka, Katie E. Marshall, Thomas J. S. Merritt, Brent J. Sinclair

Sci Rep. 2016; 6: 28999. Published online 2016 Jun 30. doi: 10.1038/srep28999

PMCID:: PMC4928047

Abstract Article PDF–3.1M

Select item 488965812.

mRNA-Associated Processes and Their Influence on Exon-Intron Structure in Drosophila melanogaster

Gildas Lepennetier, Francesco Catania

G3 (Bethesda) 2016 Jun; 6(6): 1617–1626. Published online 2016 Mar 28. doi: 10.1534/g3.116.029231

PMCID:: PMC4889658

Abstract Article PDF–1.5M

Select item 304044113.

A genome-wide Drosophila screen for heat nociception identifies α2δ3 as an evolutionary-conserved pain gene

G. Gregory Neely, Andreas Hess, Michael Costigan, Alex C. Keene, Spyros Goulas, Michiel Langeslag, Robert S Griffin, Inna Belfer, Feng Dai, Shad Smith, Luda Diatchenko, Vaijayanti Gupta, Cui-ping Xia, Sabina Amann, Silke Kreitz, Cornelia Heindl-Erdmann, Susanne Wolz, Cindy V. Ly, Suchir Arora, Rinku Sarangi, Debasis Dan, Maria Novatchkova, Mark Rosenzweig, Dustin Gibson, Darwin Truong, Daniel Schramek, Tamara Zoranovic, Shane J. F. Cronin, Belinda Angjeli, Kay Brune, Georg Dietzl, William Maixner, Arabella Meixner, Winston Thomas, J. Andrew Pospisilik, Mattias Alenius, Michaela Kress, Sai Subramaniam, Paul A. Garrity, Hugo J. Bellen, Clifford J. Woolf, Josef M. Penninger

Cell. Author manuscript; available in PMC 2011 Nov 12.

Published in final edited form as: Cell. 2010 Nov 12; 143(4): 628–638. doi: 10.1016/j.cell.2010.09.047

PMCID:: PMC3040441

Abstract Article PDF–2.0M

Select item 353067714.

High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression

Philippe Batut, Alexander Dobin, Charles Plessy, Piero Carninci, Thomas R. Gingeras

Genome Res. 2013 Jan; 23(1): 169–180. doi: 10.1101/gr.139618.112

PMCID:: PMC3530677

Abstract Article PDF–1.5M

Select item 570780515.

Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species

Piero Sanfilippo, Jiayu Wen, Eric C. Lai

Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0

PMCID:: PMC5707805

Abstract Article PDF–3.2M

Select item 568900216.

Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster

Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira

RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117

PMCID:: PMC5689002

Abstract Article PDF–4.0M

Select item 435288717.

The Release 6 reference sequence of the Drosophila melanogaster genome

Roger A. Hoskins, Joseph W. Carlson, Kenneth H. Wan, Soo Park, Ivonne Mendez, Samuel E. Galle, Benjamin W. Booth, Barret D. Pfeiffer, Reed A. George, Robert Svirskas, Martin Krzywinski, Jacqueline Schein, Maria Carmela Accardo, Elisabetta Damia, Giovanni Messina, María Méndez-Lago, Beatriz de Pablos, Olga V. Demakova, Evgeniya N. Andreyeva, Lidiya V. Boldyreva, Marco Marra, A. Bernardo Carvalho, Patrizio Dimitri, Alfredo Villasante, Igor F. Zhimulev, Gerald M. Rubin, Gary H. Karpen, Susan E. Celniker

Genome Res. 2015 Mar; 25(3): 445–458. doi: 10.1101/gr.185579.114

PMCID:: PMC4352887

Abstract Article PDF–1022K

Select item 282505318.

Sequence Finishing and Mapping of Drosophila melanogaster Heterochromatin

Roger A. Hoskins, Joseph W. Carlson, Cameron Kennedy, David Acevedo, Martha Evans-Holm, Erwin Frise, Kenneth H. Wan, Soo Park, Maria Mendez-Lago, Fabrizio Rossi, Alfredo Villasante, Patrizio Dimitri, Gary H. Karpen, Susan E. Celniker

Science. Author manuscript; available in PMC 2010 Feb 19.

Published in final edited form as: Science. 2007 Jun 15; 316(5831): 1625–1628. doi: 10.1126/science.1139816

PMCID:: PMC2825053

Abstract Article PDF–858K

Select item 281928019.

The Release 5.1 Annotation of Drosophila melanogaster Heterochromatin

Christopher D. Smith, ShengQiang Shu, Christopher J. Mungall, Gary H. Karpen

Science. Author manuscript; available in PMC 2010 Feb 10.

Published in final edited form as: Science. 2007 Jun 15; 316(5831): 1586. doi: 10.1126/science.1139815

Correction in:: volume 317 on page 1325

PMCID:: PMC2819280

Abstract Article PDF–1.3M

Select item 118564820.

Combined Evidence Annotation of Transposable Elements in Genome Sequences

Hadi Quesneville, Casey M Bergman, Olivier Andrieu, Delphine Autard, Danielle Nouaud, Michael Ashburner, Dominique Anxolabehere

PLoS Comput Biol. 2005 Jul; 1(2): e22. Published online 2005 Jul 29. doi: 10.1371/journal.pcbi.0010022

PMCID:: PMC1185648

Abstract Article PDF–273K

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