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Items: 1 to 20 of 129

1.
Mitochondria as environments for the nuclear genome in Drosophila: mitonuclear G×G×E
David M Rand, James A Mossman, Adam N Spierer, John A Santiago
J Hered. 2022 Jan; 113(1): 37–47. Published online 2021 Dec 29. doi: 10.1093/jhered/esab066
PMCID:
PMC8851671
AbstractArticlePDF–15M
2.
Defining the 5΄ and 3΄ landscape of the Drosophila transcriptome with Exo-seq and RNaseH-seq
Shaked Afik, Osnat Bartok, Maxim N. Artyomov, Alexander A. Shishkin, Sabah Kadri, Mor Hanan, Xiaopeng Zhu, Manuel Garber, Sebastian Kadener
Nucleic Acids Res. 2017 Jun 20; 45(11): e95. Published online 2017 Feb 22. doi: 10.1093/nar/gkx133
PMCID:
PMC5499799
AbstractArticlePDF–2.4M
3.
The Hippo pathway as a target of the Drosophila DRE/DREF transcriptional regulatory pathway
Nicole Vo, Takeshi Horii, Hiroshi Yanai, Hideki Yoshida, Masamitsu Yamaguchi
Sci Rep. 2014; 4: 7196. Published online 2014 Nov 26. doi: 10.1038/srep07196
PMCID:
PMC4244634
AbstractArticlePDF–7.2M
4.
DREF is involved in the steroidogenesis via regulation of shadow gene
Joung-Sun Park, Yoon-Jeong Choi, Dang Thi Phuong Thao, Young-Shin Kim, Masamitsu Yamaguchi, Mi-Ae Yoo
Am J Cancer Res. 2012; 2(6): 714–725. Published online 2012 Nov 20.
PMCID:
PMC3512185
AbstractArticlePDF–2.7M
5.
The warts gene as a novel target of the Drosophila DRE/DREF transcription pathway
Shunsuke Fujiwara, Hiroyuki Ida, Yasuhide Yoshioka, Hideki Yoshida, Masamitsu Yamaguchi
Am J Cancer Res. 2012; 2(1): 36–44. Published online 2011 Nov 22.
PMCID:
PMC3236570
AbstractArticlePDF–315K
6.
Redox regulation of DNA binding activity of DREF (DNA replication-related element binding factor) in Drosophila.
Tae-Yeong Choi, So Young Park, Ho-Sung Kang, Jae-Hun Cheong, Han-Do Kim, Bok Luel Lee, Fumiko Hirose, Masamitsu Yamaguchi, Mi-Ae Yoo
Biochem J. 2004 Mar 15; 378(Pt 3): 833–838. doi: 10.1042/BJ20031601
PMCID:
PMC1224010
SummaryPDF–205K
7.
Transcriptional regulation of the Drosophila caudal homeobox gene by DRE/DREF
Yoon-Jeong Choi, Tae-Young Choi, Masamitsu Yamaguchi, Akio Matsukage, Young-Shin Kim, Mi-Ae Yoo
Nucleic Acids Res. 2004; 32(12): 3734–3742. Published online 2004 Jul 14. doi: 10.1093/nar/gkh688
PMCID:
PMC484175
AbstractArticlePDF–299K
8.
Transcriptional regulation of the Drosophila catalase gene by the DRE/DREF system
So Young Park, Young-Shin Kim, Dong-Jin Yang, Mi-Ae Yoo
Nucleic Acids Res. 2004; 32(4): 1318–1324. Published online 2004 Feb 24. doi: 10.1093/nar/gkh302
PMCID:
PMC390290
AbstractArticlePDF–229K
9.
Transcriptional regulation of the Drosophila CycA gene by the DNA replication-related element (DRE) and DRE binding factor (DREF).
K Ohno, F Hirose, K Sakaguchi, Y Nishida, A Matsukage
Nucleic Acids Res. 1996 Oct 15; 24(20): 3942–3946. doi: 10.1093/nar/24.20.3942
PMCID:
PMC146190
SummaryPDF–92K
10.
Identification of three conserved regions in the DREF transcription factors from Drosophila melanogaster and Drosophila virilis.
Y Takahashi, F Hirose, A Matsukage, M Yamaguchi
Nucleic Acids Res. 1999 Jan 15; 27(2): 510–516. doi: 10.1093/nar/27.2.510
PMCID:
PMC148208
SummaryPDF–253K
11.
Transcriptional regulation of the Drosophila-raf proto-oncogene by the DNA replication-related element (DRE)/DRE-binding factor (DREF) system.
J R Ryu, T Y Choi, E J Kwon, W H Lee, Y Nishida, Y Hayashi, A Matsukage, M Yamaguchi, M A Yoo
Nucleic Acids Res. 1997 Feb 15; 25(4): 794–799. doi: 10.1093/nar/25.4.794
PMCID:
PMC146497
SummaryPDF–157K
12.
Drosophila Mi-2 Negatively Regulates dDREF by Inhibiting Its DNA-Binding Activity
Fumiko Hirose, Nobuko Ohshima, Eun-Jeong Kwon, Hideki Yoshida, Masamitsu Yamaguchi
Mol Cell Biol. 2002 Jul; 22(14): 5182–5193. doi: 10.1128/MCB.22.14.5182-5193.2002
PMCID:
PMC139784
AbstractArticlePDF–880K
13.
The role of insulators and transcription in 3D chromatin organization of flies
Keerthi T. Chathoth, Liudmila A. Mikheeva, Gilles Crevel, Jareth C. Wolfe, Ioni Hunter, Saskia Beckett-Doyle, Sue Cotterill, Hongsheng Dai, Andrew Harrison, Nicolae Radu Zabet
Genome Res. 2022 Apr; 32(4): 682–698. doi: 10.1101/gr.275809.121
PMCID:
PMC8997359
AbstractArticlePDF–13M
14.
Drosophila nuclear factor DREF regulates the expression of the mitochondrial DNA helicase and mitochondrial transcription factor B2 but not the mitochondrial translation factor B1
Miguel A. Fernández-Moreno, Rosana Hernández, Cristina Adán, Marina Roberti, Francesco Bruni, Paola Loguercio Polosa, Palmiro Cantatore, Yuichi Matsushima, Laurie S. Kaguni, Rafael Garesse
Biochim Biophys Acta. Author manuscript; available in PMC 2016 Jan 22.
Published in final edited form as: Biochim Biophys Acta. 2013 Oct; 1829(10): 1136–1146. Published online 2013 Jul 31. doi: 10.1016/j.bbagrm.2013.07.006
PMCID:
PMC4722815
AbstractArticlePDF–2.6M
15.
Insulators recruit histone methyltransferase dMes4 to regulate chromatin of flanking genes
Priscillia Lhoumaud, Magali Hennion, Adrien Gamot, Suresh Cuddapah, Sophie Queille, Jun Liang, Gael Micas, Pauline Morillon, Serge Urbach, Olivier Bouchez, Dany Severac, Eldon Emberly, Keji Zhao, Olivier Cuvier
EMBO J. 2014 Jul 17; 33(14): 1599–1613. Published online 2014 Jun 10. doi: 10.15252/embj.201385965
PMCID:
PMC4198054
AbstractArticlePDF–3.0M
16.
Drosophila myeloid leukemia factor acts with DREF to activate the JNK signaling pathway
H Yanai, Y Yoshioka, H Yoshida, Y Nakao, A Plessis, M Yamaguchi
Oncogenesis. 2014 Apr; 3(4): e98. Published online 2014 Apr 21. doi: 10.1038/oncsis.2014.13
PMCID:
PMC4007195
AbstractArticlePDF–2.1M
17.
The Putzig partners DREF, TRF2 and KEN are involved in the regulation of the Drosophila telomere retrotransposons, HeT-A and TART
Rute Silva-Sousa, Míriam Díaz Varela, Elena Casacuberta
Mob DNA. 2013; 4: 18. Published online 2013 Jul 3. doi: 10.1186/1759-8753-4-18
PMCID:
PMC3726405
AbstractArticlePDF–1.6M
18.
Targeted Expression of the DNA Binding Domain of DRE-Binding Factor, a Drosophila Transcription Factor, Attenuates DNA Replication of the Salivary Gland and Eye Imaginal Disc
Fumiko Hirose, Masamitsu Yamaguchi, Akio Matsukage
Mol Cell Biol. 1999 Sep; 19(9): 6020–6028. doi: 10.1128/mcb.19.9.6020
PMCID:
PMC84493
AbstractArticlePDF–1.7M
19.
Drosophila damage-specific DNA-binding protein 1 (D-DDB1) is controlled by the DRE/DREF system
Kei-ichi Takata, Gen Ishikawa, Fumiko Hirose, Kengo Sakaguchi
Nucleic Acids Res. 2002 Sep 1; 30(17): 3795–3808. doi: 10.1093/nar/gkf490
PMCID:
PMC137413
AbstractArticlePDF–658K
20.
Functionally distinct promoter classes initiate transcription via different mechanisms reflected in focused versus dispersed initiation patterns
Leonid Serebreni, Lisa‐Marie Pleyer, Vanja Haberle, Oliver Hendy, Anna Vlasova, Vincent Loubiere, Filip Nemčko, Katharina Bergauer, Elisabeth Roitinger, Karl Mechtler, Alexander Stark
EMBO J. 2023 May; 42(10): e113519. Published online 2023 Apr 4. doi: 10.15252/embj.2023113519
PMCID:
PMC10183819
AbstractArticlePDF–2.7M

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