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Select item 77040121.

Identification of the enzymes responsible for m^2,2G and acp³U formation on cytosolic tRNA from insects and plants

Holly M. Funk, Ruoxia Zhao, Maggie Thomas, Sarah M. Spigelmyer, Nichlas J. Sebree, Regan O. Bales, Jamison B. Burchett, Justen B. Mamaril, Patrick A. Limbach, Michael P. Guy

PLoS One. 2020; 15(11): e0242737. Published online 2020 Nov 30. doi: 10.1371/journal.pone.0242737

PMCID:: PMC7704012

Abstract Article PDF–2.1M

Select item 11823372.

Variant histone H3.3 is deposited at sites of nucleosomal displacement throughout transcribed genes while active histone modifications show a promoter-proximal bias

Christiane Wirbelauer, Oliver Bell, Dirk Schübeler

Genes Dev. 2005 Aug 1; 19(15): 1761–1766. doi: 10.1101/gad.347705

PMCID:: PMC1182337

Abstract Article PDF–348K

Select item 21401133.

Localized H3K36 methylation states define histone H4K16 acetylation during transcriptional elongation in Drosophila

Oliver Bell, Christiane Wirbelauer, Marc Hild, Annette N D Scharf, Michaela Schwaiger, David M MacAlpine, Frédéric Zilbermann, Fred van Leeuwen, Stephen P Bell, Axel Imhof, Dan Garza, Antoine H F M Peters, Dirk Schübeler

EMBO J. 2007 Dec 12; 26(24): 4974–4984. Published online 2007 Nov 15. doi: 10.1038/sj.emboj.7601926

PMCID:: PMC2140113

Abstract Article PDF–385K

Select item 23229344.

Drosophila Growth and Development in the Absence of dMyc and dMnt

Sarah B. Pierce, Cynthia Yost, Sarah A. R. Anderson, Erin M. Flynn, Jeffrey Delrow, Robert N. Eisenman

Dev Biol. Author manuscript; available in PMC 2009 Mar 15.

Published in final edited form as: Dev Biol. 2008 Mar 15; 315(2): 303–316. Published online 2007 Dec 27. doi: 10.1016/j.ydbio.2007.12.026

PMCID:: PMC2322934

Abstract Article PDF–1.6M

Select item 38143155.

PNUTS/PP1 Regulates RNAPII-Mediated Gene Expression and Is Necessary for Developmental Growth

Anita Ciurciu, Louise Duncalf, Vincent Jonchere, Nick Lansdale, Olga Vasieva, Peter Glenday, Andreii Rudenko, Emese Vissi, Neville Cobbe, Luke Alphey, Daimark Bennett

PLoS Genet. 2013 Oct; 9(10): e1003885. Published online 2013 Oct 31. doi: 10.1371/journal.pgen.1003885

PMCID:: PMC3814315

Abstract Article PDF–7.7M

Select item 21718506.

Hrp59, an hnRNP M protein in Chironomus and Drosophila, binds to exonic splicing enhancers and is required for expression of a subset of mRNAs

Eva Kiesler, Manuela E. Hase, David Brodin, Neus Visa

J Cell Biol. 2005 Mar 28; 168(7): 1013–1025. doi: 10.1083/jcb.200407173

PMCID:: PMC2171850

Abstract Article PDF–3.8M

Select item 28263157.

Expression profiling of prospero in the Drosophila larval chemosensory organ: Between growth and outgrowth

Laure Guenin, Mahatsangy Raharijaona, Rémi Houlgatte, Fawzia Baba-Aissa

BMC Genomics. 2010; 11: 47. Published online 2010 Jan 19. doi: 10.1186/1471-2164-11-47

PMCID:: PMC2826315

Abstract Article PDF–1.1M

Select item 14504038.

A Genetic Screen for Suppressors of Drosophila NSF2 Neuromuscular Junction Overgrowth

Matthew J. Laviolette, Paula Nunes, Jean-Baptiste Peyre, Toshiro Aigaki, Bryan A. Stewart

Genetics. 2005 Jun; 170(2): 779–792. doi: 10.1534/genetics.104.035691

PMCID:: PMC1450403

Abstract Article PDF–329K

Select item 41977109.

Analysis of the expression patterns, subcellular localisations and interaction partners of Drosophila proteins using a pigP protein trap library

Nick Lowe, Johanna S. Rees, John Roote, Ed Ryder, Irina M. Armean, Glynnis Johnson, Emma Drummond, Helen Spriggs, Jenny Drummond, Jose P. Magbanua, Huw Naylor, Bénédicte Sanson, Rebecca Bastock, Sven Huelsmann, Vitor Trovisco, Matthias Landgraf, Seymour Knowles-Barley, J. Douglas Armstrong, Helen White-Cooper, Celia Hansen, Roger G. Phillips, The UK Drosophila Protein Trap Screening Consortium, Kathryn S. Lilley, Steven Russell, Daniel St Johnston

Development. 2014 Oct; 141(20): 3994–4005. doi: 10.1242/dev.111054

PMCID:: PMC4197710

Abstract Article

Select item 331904810.

A Protein Complex Network of Drosophila melanogaster

K. G. Guruharsha, J. -F. Rual, B. Zhai, J. Mintseris, P. Vaidya, N. Vaidya, C. Beekman, C. Wong, D. Y. Rhee, O. Cenaj, E. McKillip, S. Shah, M. Stapleton, K. H. Wan, C. Yu, B. Parsa, J. W. Carlson, X. Chen, B. Kapadia, K. VijayRaghavan, S. P. Gygi, S. E. Celniker, R. A. Obar, S. Artavanis-Tsakonas

Cell. Author manuscript; available in PMC 2012 Oct 28.

Published in final edited form as: Cell. 2011 Oct 28; 147(3): 690–703. doi: 10.1016/j.cell.2011.08.047

PMCID:: PMC3319048

Abstract Article PDF–3.2M

Select item 473800511.

Proteome-wide dataset supporting the study of ancient metazoan macromolecular complexes

Sadhna Phanse, Cuihong Wan, Blake Borgeson, Fan Tu, Kevin Drew, Greg Clark, Xuejian Xiong, Olga Kagan, Julian Kwan, Alexandr Bezginov, Kyle Chessman, Swati Pal, Graham Cromar, Ophelia Papoulas, Zuyao Ni, Daniel R. Boutz, Snejana Stoilova, Pierre C. Havugimana, Xinghua Guo, Ramy H. Malty, Mihail Sarov, Jack Greenblatt, Mohan Babu, W. Brent Derry, Elisabeth R. Tillier, John B. Wallingford, John Parkinson, Edward M. Marcotte, Andrew Emili

Data Brief. 2016 Mar; 6: 715–721. Published online 2015 Dec 12. doi: 10.1016/j.dib.2015.11.062

PMCID:: PMC4738005

Abstract Article PDF–205K

Select item 488965812.

mRNA-Associated Processes and Their Influence on Exon-Intron Structure in Drosophila melanogaster

Gildas Lepennetier, Francesco Catania

G3 (Bethesda) 2016 Jun; 6(6): 1617–1626. Published online 2016 Mar 28. doi: 10.1534/g3.116.029231

PMCID:: PMC4889658

Abstract Article PDF–1.5M

Select item 696157813.

CRISPR-based modular assembly of a UAS-cDNA/ORF plasmid library for more than 5500 Drosophila genes conserved in humans

Ping Wei, Wen Xue, Yun Zhao, Guang Ning, Jiwu Wang

Genome Res. 2020 Jan; 30(1): 95–106. doi: 10.1101/gr.250811.119

PMCID:: PMC6961578

Abstract Article PDF–3.6M

Select item 427152714.

Phylostratigraphic Bias Creates Spurious Patterns of Genome Evolution

Bryan A. Moyers, Jianzhi Zhang

Mol Biol Evol. 2015 Jan 1; 32(1): 258–267. Published online 2014 Oct 13. doi: 10.1093/molbev/msu286

Correction in:: Mol Biol Evol. 2016 Nov; 33(11): 3031.

PMCID:: PMC4271527

Abstract Article PDF–618K

Select item 353067715.

High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression

Philippe Batut, Alexander Dobin, Charles Plessy, Piero Carninci, Thomas R. Gingeras

Genome Res. 2013 Jan; 23(1): 169–180. doi: 10.1101/gr.139618.112

PMCID:: PMC3530677

Abstract Article PDF–1.5M

Select item 570780516.

Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species

Piero Sanfilippo, Jiayu Wen, Eric C. Lai

Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0

PMCID:: PMC5707805

Abstract Article PDF–3.2M

Select item 568900217.

Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster

Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira

RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117

PMCID:: PMC5689002

Abstract Article PDF–4.0M

Select item 435288718.

The Release 6 reference sequence of the Drosophila melanogaster genome

Roger A. Hoskins, Joseph W. Carlson, Kenneth H. Wan, Soo Park, Ivonne Mendez, Samuel E. Galle, Benjamin W. Booth, Barret D. Pfeiffer, Reed A. George, Robert Svirskas, Martin Krzywinski, Jacqueline Schein, Maria Carmela Accardo, Elisabetta Damia, Giovanni Messina, María Méndez-Lago, Beatriz de Pablos, Olga V. Demakova, Evgeniya N. Andreyeva, Lidiya V. Boldyreva, Marco Marra, A. Bernardo Carvalho, Patrizio Dimitri, Alfredo Villasante, Igor F. Zhimulev, Gerald M. Rubin, Gary H. Karpen, Susan E. Celniker

Genome Res. 2015 Mar; 25(3): 445–458. doi: 10.1101/gr.185579.114

PMCID:: PMC4352887

Abstract Article PDF–1022K

Select item 282505319.

Sequence Finishing and Mapping of Drosophila melanogaster Heterochromatin

Roger A. Hoskins, Joseph W. Carlson, Cameron Kennedy, David Acevedo, Martha Evans-Holm, Erwin Frise, Kenneth H. Wan, Soo Park, Maria Mendez-Lago, Fabrizio Rossi, Alfredo Villasante, Patrizio Dimitri, Gary H. Karpen, Susan E. Celniker

Science. Author manuscript; available in PMC 2010 Feb 19.

Published in final edited form as: Science. 2007 Jun 15; 316(5831): 1625–1628. doi: 10.1126/science.1139816

PMCID:: PMC2825053

Abstract Article PDF–858K

Select item 281928020.

The Release 5.1 Annotation of Drosophila melanogaster Heterochromatin

Christopher D. Smith, ShengQiang Shu, Christopher J. Mungall, Gary H. Karpen

Science. Author manuscript; available in PMC 2010 Feb 10.

Published in final edited form as: Science. 2007 Jun 15; 316(5831): 1586. doi: 10.1126/science.1139815

Correction in:: volume 317 on page 1325

PMCID:: PMC2819280

Abstract Article PDF–1.3M

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