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Select item 99348651.

Emergent dynamics of adult stem cell lineages from single nucleus and single cell RNA-Seq of Drosophila testes

Amelie A Raz, Gabriela S Vida, Sarah R Stern, Sharvani Mahadevaraju, Jaclyn M Fingerhut, Jennifer M Viveiros, Soumitra Pal, Jasmine R Grey, Mara R Grace, Cameron W Berry, Hongjie Li, Jasper Janssens, Wouter Saelens, Zhantao Shao, Chun Hu, Yukiko M Yamashita, Teresa Przytycka, Brian Oliver, Julie A Brill, Henry Krause, Erika L Matunis, Helen White-Cooper, Stephen DiNardo, Margaret T Fuller

eLife. 2023; 12: e82201. Published online 2023 Feb 16. doi: 10.7554/eLife.82201

PMCID:: PMC9934865

Abstract Article PDF–11M

Select item 25001912.

Gene Expression Disruptions of Organism versus Organ in Drosophila Species Hybrids

Daniel J. Catron, Mohamed A. F. Noor

PLoS One. 2008; 3(8): e3009. Published online 2008 Aug 20. doi: 10.1371/journal.pone.0003009

PMCID:: PMC2500191

Abstract Article PDF–190K

Select item 28089243.

FlyTED: the Drosophila Testis Gene Expression Database

Jun Zhao, Graham Klyne, Elizabeth Benson, Elin Gudmannsdottir, Helen White-Cooper, David Shotton

Nucleic Acids Res. 2010 Jan; 38(Database issue): D710–D715. Published online 2009 Nov 24. doi: 10.1093/nar/gkp1006

PMCID:: PMC2808924

Abstract Article PDF–3.6M

Select item 58799344.

Genome-wide analysis of gene regulation mechanisms during Drosophila spermatogenesis

Petr P. Laktionov, Daniil A. Maksimov, Stanislav E. Romanov, Polina A. Antoshina, Olga V. Posukh, Helen White-Cooper, Dmitry E. Koryakov, Stepan N. Belyakin

Epigenetics Chromatin. 2018; 11: 14. Published online 2018 Apr 2. doi: 10.1186/s13072-018-0183-3

PMCID:: PMC5879934

Abstract Article PDF–1.3M

Select item 31007065.

Sequential changes at differentiation gene promoters as they become active in a stem cell lineage

Xin Chen, Chenggang Lu, Jose Rafael Morillo Prado, Suk Ho Eun, Margaret T. Fuller

Development. 2011 Jun 15; 138(12): 2441–2450. doi: 10.1242/dev.056572

PMCID:: PMC3100706

Abstract Article

Select item 71748446.

Single-cyst transcriptome analysis of Drosophila male germline stem cell lineage

Zhen Shi, Cindy Lim, Vuong Tran, Kairong Cui, Keji Zhao, Xin Chen

Development. 2020 Apr 15; 147(8): dev184259. Published online 2020 Apr 12. doi: 10.1242/dev.184259

PMCID:: PMC7174844

Abstract Article

Select item 18477097.

Discovery of tMAC: a Drosophila testis-specific meiotic arrest complex paralogous to Myb–Muv B

Eileen L. Beall, Peter W. Lewis, Maren Bell, Michael Rocha, D. Leanne Jones, Michael R. Botchan

Genes Dev. 2007 Apr 15; 21(8): 904–919. doi: 10.1101/gad.1516607

PMCID:: PMC1847709

Abstract Article PDF–1.2M

Select item 36749978.

The RNA Export Factor, Nxt1, Is Required for Tissue Specific Transcriptional Regulation

Simona Caporilli, Yachuan Yu, Jianqiao Jiang, Helen White-Cooper

PLoS Genet. 2013 Jun; 9(6): e1003526. Published online 2013 Jun 6. doi: 10.1371/journal.pgen.1003526

PMCID:: PMC3674997

Abstract Article PDF–15M

Select item 22298099.

tombola, a tesmin/TSO1 family protein, regulates transcriptional activation in the Drosophila male germline and physically interacts with Always early

Jianqiao Jiang, Elizabeth Benson, Nina Bausek, Karen Doggett, Helen White-Cooper

Development. Author manuscript; available in PMC 2008 Feb 5.

Published in final edited form as: Development. 2007 Apr; 134(8): 1549–1559. Published online 2007 Mar 14. doi: 10.1242/dev.000521

PMCID:: PMC2229809

Abstract Article PDF–2.8M

Select item 214798610.

Evolution in the Fast Lane: Rapidly Evolving Sex-Related Genes in Drosophila

Wilfried Haerty, Santosh Jagadeeshan, Rob J. Kulathinal, Alex Wong, Kristipati Ravi Ram, Laura K. Sirot, Lisa Levesque, Carlo G. Artieri, Mariana F. Wolfner, Alberto Civetta, Rama S. Singh

Genetics. 2007 Nov; 177(3): 1321–1335. doi: 10.1534/genetics.107.078865

PMCID:: PMC2147986

Abstract Article PDF–772K

Select item 346943911.

Transcriptional regulation during Drosophila spermatogenesis

Cindy Lim, Lama Tarayrah, Xin Chen

Spermatogenesis. 2012 Jul 1; 2(3): 158–166. doi: 10.4161/spmg.21775

PMCID:: PMC3469439

Abstract Article PDF–649K

Select item 670028212.

Sex Differences in Intestinal Carbohydrate Metabolism Promote Food Intake and Sperm Maturation

Bruno Hudry, Eva de Goeij, Alessandro Mineo, Pedro Gaspar, Dafni Hadjieconomou, Chris Studd, Joao B. Mokochinski, Holger B. Kramer, Pierre-Yves Plaçais, Thomas Preat, Irene Miguel-Aliaga

Cell. 2019 Aug 8; 178(4): 901–918.e16. doi: 10.1016/j.cell.2019.07.029

PMCID:: PMC6700282

Abstract Article

Select item 312373713.

Wake-up-call, a lin-52 paralogue, and Always early, a lin-9 homologue physically interact, but have opposing functions in regulating testis-specific gene expression

Karen Doggett, Jianqiao Jiang, Gajender Aleti, Helen White-Cooper

Dev Biol. 2011 Jul 15; 355(2-2): 381–393. doi: 10.1016/j.ydbio.2011.04.030

PMCID:: PMC3123737

Abstract Article

Select item 291957414.

Dynamic regulation of alternative splicing and chromatin structure in Drosophila gonads revealed by RNA-seq

Qiang Gan, Iouri Chepelev, Gang Wei, Lama Tarayrah, Kairong Cui, Keji Zhao, Xin Chen

Cell Res. Author manuscript; available in PMC 2011 Jan 1.

Published in final edited form as: Cell Res. 2010 Jul; 20(7): 763–783. Published online 2010 May 4. doi: 10.1038/cr.2010.64

PMCID:: PMC2919574

Abstract Article PDF–3.1M

Select item 617725715.

Generation of a versatile BiFC ORFeome library for analyzing protein–protein interactions in live Drosophila

Johannes Bischof, Marilyne Duffraisse, Edy Furger, Leiore Ajuria, Guillaume Giraud, Solene Vanderperre, Rachel Paul, Mikael Björklund, Damien Ahr, Alexis W Ahmed, Lionel Spinelli, Christine Brun, Konrad Basler, Samir Merabet

eLife. 2018; 7: e38853. Published online 2018 Sep 24. doi: 10.7554/eLife.38853

PMCID:: PMC6177257

Abstract Article PDF–4.9M

Select item 331960816.

Genome-Wide Association Analysis of Oxidative Stress Resistance in Drosophila melanogaster

Allison L. Weber, George F. Khan, Michael M. Magwire, Crystal L. Tabor, Trudy F. C. Mackay, Robert R. H. Anholt

PLoS One. 2012; 7(4): e34745. Published online 2012 Apr 4. doi: 10.1371/journal.pone.0034745

PMCID:: PMC3319608

Abstract Article PDF–1009K

Select item 648595617.

A Comprehensive Drosophila melanogaster Transcription Factor Interactome

Leila Shokri, Sachi Inukai, Antonina Hafner, Kathryn Weinand, Korneel Hens, Anastasia Vedenko, Stephen S. Gisselbrecht, Riccardo Dainese, Johannes Bischof, Edy Furger, Jean-Daniel Feuz, Konrad Basler, Bart Deplancke, Martha L. Bulyk

Cell Rep. Author manuscript; available in PMC 2019 Apr 26.

Published in final edited form as: Cell Rep. 2019 Apr 16; 27(3): 955–970.e7. doi: 10.1016/j.celrep.2019.03.071

PMCID:: PMC6485956

Abstract Article PDF–1.6M

Select item 438152318.

A large-scale, in vivo transcription factor screen defines bivalent chromatin as a key property of regulatory factors mediating Drosophila wing development

Claus Schertel, Monica Albarca, Claudia Rockel-Bauer, Nicholas W. Kelley, Johannes Bischof, Korneel Hens, Erik van Nimwegen, Konrad Basler, Bart Deplancke

Genome Res. 2015 Apr; 25(4): 514–523. doi: 10.1101/gr.181305.114

PMCID:: PMC4381523

Abstract Article PDF–700K

Select item 440366719.

Transcription Factor Networks in Drosophila melanogaster

David Y. Rhee, Dong-Yeon Cho, Bo Zhai, Matthew Slattery, Lijia Ma, Julian Mintseris, Christina Y. Wong, Kevin P. White, Susan E. Celniker, Teresa M. Przytycka, Steven P. Gygi, Robert A. Obar, Spyros Artavanis-Tsakonas

Cell Rep. Author manuscript; available in PMC 2015 Apr 20.

Published in final edited form as: Cell Rep. 2014 Sep 25; 8(6): 2031–2043. Published online 2014 Sep 18. doi: 10.1016/j.celrep.2014.08.038

PMCID:: PMC4403667

Abstract Article PDF–1.3M

Select item 480554520.

A genome-wide resource for the analysis of protein localisation in Drosophila

Mihail Sarov, Christiane Barz, Helena Jambor, Marco Y Hein, Christopher Schmied, Dana Suchold, Bettina Stender, Stephan Janosch, Vinay Vikas KJ, RT Krishnan, Aishwarya Krishnamoorthy, Irene RS Ferreira, Radoslaw K Ejsmont, Katja Finkl, Susanne Hasse, Philipp Kämpfer, Nicole Plewka, Elisabeth Vinis, Siegfried Schloissnig, Elisabeth Knust, Volker Hartenstein, Matthias Mann, Mani Ramaswami, K VijayRaghavan, Pavel Tomancak, Frank Schnorrer

eLife. 2016; 5: e12068. Published online 2016 Feb 20. doi: 10.7554/eLife.12068

PMCID:: PMC4805545

Abstract Article PDF–9.1M

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